The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:

"
Low-density Lipoprotein Receptor
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
« Back to all FunFams

FunFam 128: Vermiform, isoform H

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 3 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Chitin deacetylase activity GO:0004099
Catalysis of the reaction: chitin + H2O = chitosan + acetate.
12 E1JI40 (/IMP) Q06RG9 (/IMP) Q86P23 (/IMP) Q8IQU1 (/IMP) Q8IQU1 (/IMP) Q8IQU1 (/IMP) Q8IQU1 (/IMP) Q9VW31 (/IMP) Q9VW31 (/IMP) Q9VW31 (/IMP)
(2 more)
Chitin binding GO:0008061
Interacting selectively and non-covalently with chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.
12 E1JI40 (/IMP) Q06RG9 (/IMP) Q86P23 (/IMP) Q8IQU1 (/IMP) Q8IQU1 (/IMP) Q8IQU1 (/IMP) Q8IQU1 (/IMP) Q9VW31 (/IMP) Q9VW31 (/IMP) Q9VW31 (/IMP)
(2 more)
Extracellular matrix structural constituent GO:0005201
The action of a molecule that contributes to the structural integrity of the extracellular matrix.
1 Q8CG65 (/RCA)

There are 5 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Open tracheal system development GO:0007424
The process whose specific outcome is the progression of an open tracheal system over time, from its formation to the mature structure. An open tracheal system is a respiratory system, a branched network of epithelial tubes that supplies oxygen to target tissues via spiracles. An example of this is found in Drosophila melanogaster.
12 E1JI40 (/IMP) Q06RG9 (/IMP) Q86P23 (/IMP) Q8IQU1 (/IMP) Q8IQU1 (/IMP) Q8IQU1 (/IMP) Q8IQU1 (/IMP) Q9VW31 (/IMP) Q9VW31 (/IMP) Q9VW31 (/IMP)
(2 more)
Regulation of tube length, open tracheal system GO:0035159
Ensuring that a tube in an open tracheal system is of the correct length.
12 E1JI40 (/IMP) Q06RG9 (/IMP) Q86P23 (/IMP) Q8IQU1 (/IMP) Q8IQU1 (/IMP) Q8IQU1 (/IMP) Q8IQU1 (/IMP) Q9VW31 (/IMP) Q9VW31 (/IMP) Q9VW31 (/IMP)
(2 more)
Visual behavior GO:0007632
The behavior of an organism in response to a visual stimulus.
10 E1JI40 (/IMP) Q06RG9 (/IMP) Q8IQU1 (/IMP) Q8IQU1 (/IMP) Q8IQU1 (/IMP) Q8IQU1 (/IMP) Q9VW31 (/IMP) Q9VW31 (/IMP) Q9VW31 (/IMP) Q9VW31 (/IMP)
Dorsal trunk growth, open tracheal system GO:0035001
Growth of epithelial tubes that originate from pits in an open tracheal system and grow towards each other to meet and form a continuous open tube called the dorsal trunk. The dorsal trunk extends from the anterior spiracle to the posterior spiracle of the larva and forms the main airway of the insect tracheal system.
10 E1JI40 (/IMP) Q06RG9 (/IMP) Q8IQU1 (/IMP) Q8IQU1 (/IMP) Q8IQU1 (/IMP) Q8IQU1 (/IMP) Q9VW31 (/IMP) Q9VW31 (/IMP) Q9VW31 (/IMP) Q9VW31 (/IMP)
Trachea morphogenesis GO:0060439
The process in which a trachea is generated and organized. The trachea is the portion of the airway that attaches to the bronchi as it branches.
10 E1JI40 (/IMP) Q06RG9 (/IMP) Q8IQU1 (/IMP) Q8IQU1 (/IMP) Q8IQU1 (/IMP) Q8IQU1 (/IMP) Q9VW31 (/IMP) Q9VW31 (/IMP) Q9VW31 (/IMP) Q9VW31 (/IMP)

There are 6 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
3 Q86P23 (/IDA) Q8CG65 (/IDA) Q9VW34 (/IDA)
Basement membrane GO:0005604
A collagen-containing extracellular matrix consisting of a thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers.
2 Q86P23 (/IDA) Q9VW34 (/IDA)
Extracellular space GO:0005615
That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.
2 Q86P23 (/IDA) Q9VW34 (/IDA)
Late endosome GO:0005770
A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center.
2 Q86P23 (/IDA) Q9VW34 (/IDA)
Extracellular space GO:0005615
That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.
1 A2VEC9 (/TAS)
Collagen-containing extracellular matrix GO:0062023
An extracellular matrix consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that provides not only essential physical scaffolding for the cellular constituents but can also initiate crucial biochemical and biomechanical cues required for tissue morphogenesis, differentiation and homeostasis. The components are secreted by cells in the vicinity and form a sheet underlying or overlying cells such as endothelial and epithelial cells.
1 Q8CG65 (/HDA)
CATH-Gene3D is a Global Biodata Core Resource Learn more...