The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"Ribosomal protein L22/L17
".
FunFam 3: 60S ribosomal protein L17
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 6 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
36 |
P18621 (/IPI)
P18621 (/IPI)
P18621 (/IPI)
P18621 (/IPI)
P18621 (/IPI)
P18621 (/IPI)
P18621 (/IPI)
P18621 (/IPI)
P18621 (/IPI)
P18621 (/IPI)
(26 more) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
35 |
P18621 (/HDA)
P18621 (/HDA)
P18621 (/HDA)
P18621 (/HDA)
P18621 (/HDA)
P18621 (/HDA)
P18621 (/HDA)
P18621 (/HDA)
P18621 (/HDA)
P18621 (/HDA)
(25 more) |
Structural constituent of ribosome GO:0003735
The action of a molecule that contributes to the structural integrity of the ribosome.
|
35 |
P18621 (/NAS)
P18621 (/NAS)
P18621 (/NAS)
P18621 (/NAS)
P18621 (/NAS)
P18621 (/NAS)
P18621 (/NAS)
P18621 (/NAS)
P18621 (/NAS)
P18621 (/NAS)
(25 more) |
Large ribosomal subunit rRNA binding GO:0070180
Interacting selectively and non-covalently with the large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.
|
35 |
P24049 (/IDA)
P24049 (/IDA)
P24049 (/IDA)
P24049 (/IDA)
P24049 (/IDA)
P24049 (/IDA)
P24049 (/IDA)
P24049 (/IDA)
P24049 (/IDA)
P24049 (/IDA)
(25 more) |
Structural constituent of ribosome GO:0003735
The action of a molecule that contributes to the structural integrity of the ribosome.
|
3 | Q9W3W8 (/TAS) Q9W3W8 (/TAS) Q9W3W8 (/TAS) |
Large ribosomal subunit rRNA binding GO:0070180
Interacting selectively and non-covalently with the large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.
|
1 | Q9CPR4 (/ISO) |
There are 10 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0000184
The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins.
|
35 |
P18621 (/TAS)
P18621 (/TAS)
P18621 (/TAS)
P18621 (/TAS)
P18621 (/TAS)
P18621 (/TAS)
P18621 (/TAS)
P18621 (/TAS)
P18621 (/TAS)
P18621 (/TAS)
(25 more) |
Translation GO:0006412
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
|
35 |
P18621 (/NAS)
P18621 (/NAS)
P18621 (/NAS)
P18621 (/NAS)
P18621 (/NAS)
P18621 (/NAS)
P18621 (/NAS)
P18621 (/NAS)
P18621 (/NAS)
P18621 (/NAS)
(25 more) |
Translational initiation GO:0006413
The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA or circRNA, and an initiation complex that contains the first aminoacyl-tRNA.
|
35 |
P18621 (/TAS)
P18621 (/TAS)
P18621 (/TAS)
P18621 (/TAS)
P18621 (/TAS)
P18621 (/TAS)
P18621 (/TAS)
P18621 (/TAS)
P18621 (/TAS)
P18621 (/TAS)
(25 more) |
SRP-dependent cotranslational protein targeting to membrane GO:0006614
The targeting of proteins to a membrane that occurs during translation and is dependent upon two key components, the signal-recognition particle (SRP) and the SRP receptor. SRP is a cytosolic particle that transiently binds to the endoplasmic reticulum (ER) signal sequence in a nascent protein, to the large ribosomal unit, and to the SRP receptor in the ER membrane.
|
35 |
P18621 (/TAS)
P18621 (/TAS)
P18621 (/TAS)
P18621 (/TAS)
P18621 (/TAS)
P18621 (/TAS)
P18621 (/TAS)
P18621 (/TAS)
P18621 (/TAS)
P18621 (/TAS)
(25 more) |
Viral transcription GO:0019083
The process by which a viral genome, or part of a viral genome, is transcribed within the host cell.
|
35 |
P18621 (/TAS)
P18621 (/TAS)
P18621 (/TAS)
P18621 (/TAS)
P18621 (/TAS)
P18621 (/TAS)
P18621 (/TAS)
P18621 (/TAS)
P18621 (/TAS)
P18621 (/TAS)
(25 more) |
Cellular response to amino acid starvation GO:0034198
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of amino acids.
|
35 |
P24049 (/IEP)
P24049 (/IEP)
P24049 (/IEP)
P24049 (/IEP)
P24049 (/IEP)
P24049 (/IEP)
P24049 (/IEP)
P24049 (/IEP)
P24049 (/IEP)
P24049 (/IEP)
(25 more) |
Positive regulation of G1/S transition of mitotic cell cycle GO:1900087
Any signalling pathway that increases or activates a cell cycle cyclin-dependent protein kinase to modulate the switch from G1 phase to S phase of the mitotic cell cycle.
|
35 |
P24049 (/IMP)
P24049 (/IMP)
P24049 (/IMP)
P24049 (/IMP)
P24049 (/IMP)
P24049 (/IMP)
P24049 (/IMP)
P24049 (/IMP)
P24049 (/IMP)
P24049 (/IMP)
(25 more) |
Response to amino acid starvation GO:1990928
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of amino acids.
|
35 |
P24049 (/IEP)
P24049 (/IEP)
P24049 (/IEP)
P24049 (/IEP)
P24049 (/IEP)
P24049 (/IEP)
P24049 (/IEP)
P24049 (/IEP)
P24049 (/IEP)
P24049 (/IEP)
(25 more) |
Cytoplasmic translation GO:0002181
The chemical reactions and pathways resulting in the formation of a protein in the cytoplasm. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein.
|
3 | Q9W3W8 (/TAS) Q9W3W8 (/TAS) Q9W3W8 (/TAS) |
Positive regulation of G1/S transition of mitotic cell cycle GO:1900087
Any signalling pathway that increases or activates a cell cycle cyclin-dependent protein kinase to modulate the switch from G1 phase to S phase of the mitotic cell cycle.
|
1 | Q9CPR4 (/ISO) |
There are 15 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
47 |
H0YP53 (/IDA)
H0YP53 (/IDA)
H0YP53 (/IDA)
H0YP53 (/IDA)
H0YP53 (/IDA)
H0YP53 (/IDA)
H0YP53 (/IDA)
H0YP53 (/IDA)
H0YP53 (/IDA)
H0YP53 (/IDA)
(37 more) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
35 |
P18621 (/HDA)
P18621 (/HDA)
P18621 (/HDA)
P18621 (/HDA)
P18621 (/HDA)
P18621 (/HDA)
P18621 (/HDA)
P18621 (/HDA)
P18621 (/HDA)
P18621 (/HDA)
(25 more) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
35 |
P24049 (/IDA)
P24049 (/IDA)
P24049 (/IDA)
P24049 (/IDA)
P24049 (/IDA)
P24049 (/IDA)
P24049 (/IDA)
P24049 (/IDA)
P24049 (/IDA)
P24049 (/IDA)
(25 more) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
35 |
P18621 (/TAS)
P18621 (/TAS)
P18621 (/TAS)
P18621 (/TAS)
P18621 (/TAS)
P18621 (/TAS)
P18621 (/TAS)
P18621 (/TAS)
P18621 (/TAS)
P18621 (/TAS)
(25 more) |
Polysome GO:0005844
A multiribosomal structure representing a linear array of ribosomes held together by messenger RNA. They represent the active complexes in cellular protein synthesis and are able to incorporate amino acids into polypeptides both in vivo and in vitro.
|
35 |
P24049 (/IDA)
P24049 (/IDA)
P24049 (/IDA)
P24049 (/IDA)
P24049 (/IDA)
P24049 (/IDA)
P24049 (/IDA)
P24049 (/IDA)
P24049 (/IDA)
P24049 (/IDA)
(25 more) |
Cytosolic large ribosomal subunit GO:0022625
The large subunit of a ribosome located in the cytosol.
|
35 |
P18621 (/HDA)
P18621 (/HDA)
P18621 (/HDA)
P18621 (/HDA)
P18621 (/HDA)
P18621 (/HDA)
P18621 (/HDA)
P18621 (/HDA)
P18621 (/HDA)
P18621 (/HDA)
(25 more) |
Cytosolic large ribosomal subunit GO:0022625
The large subunit of a ribosome located in the cytosol.
|
35 |
P24049 (/IDA)
P24049 (/IDA)
P24049 (/IDA)
P24049 (/IDA)
P24049 (/IDA)
P24049 (/IDA)
P24049 (/IDA)
P24049 (/IDA)
P24049 (/IDA)
P24049 (/IDA)
(25 more) |
A band GO:0031672
The dark-staining region of a sarcomere, in which myosin thick filaments are present; the center is traversed by the paler H zone, which in turn contains the M line.
|
35 |
P24049 (/IDA)
P24049 (/IDA)
P24049 (/IDA)
P24049 (/IDA)
P24049 (/IDA)
P24049 (/IDA)
P24049 (/IDA)
P24049 (/IDA)
P24049 (/IDA)
P24049 (/IDA)
(25 more) |
Cytosolic large ribosomal subunit GO:0022625
The large subunit of a ribosome located in the cytosol.
|
3 | Q9W3W8 (/TAS) Q9W3W8 (/TAS) Q9W3W8 (/TAS) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
1 | Q9CPR4 (/ISO) |
Polysome GO:0005844
A multiribosomal structure representing a linear array of ribosomes held together by messenger RNA. They represent the active complexes in cellular protein synthesis and are able to incorporate amino acids into polypeptides both in vivo and in vitro.
|
1 | Q9CPR4 (/ISO) |
Cytosolic large ribosomal subunit GO:0022625
The large subunit of a ribosome located in the cytosol.
|
1 | Q9CPR4 (/ISO) |
A band GO:0031672
The dark-staining region of a sarcomere, in which myosin thick filaments are present; the center is traversed by the paler H zone, which in turn contains the M line.
|
1 | Q9CPR4 (/ISO) |
Synapse GO:0045202
The junction between a nerve fiber of one neuron and another neuron, muscle fiber or glial cell. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane.
|
1 | Q9CPR4 (/EXP) |
Synapse GO:0045202
The junction between a nerve fiber of one neuron and another neuron, muscle fiber or glial cell. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane.
|
1 | Q9CPR4 (/IDA) |