The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:

"
Ribosomal protein L13
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 1: 50S ribosomal protein L13

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 3 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Zinc ion binding GO:0008270
Interacting selectively and non-covalently with zinc (Zn) ions.
272 P0AA10 (/IDA) P0AA10 (/IDA) P0AA10 (/IDA) P0AA10 (/IDA) P0AA10 (/IDA) P0AA10 (/IDA) P0AA10 (/IDA) P0AA10 (/IDA) P0AA10 (/IDA) P0AA10 (/IDA)
(262 more)
Large ribosomal subunit rRNA binding GO:0070180
Interacting selectively and non-covalently with the large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.
272 P0AA10 (/IDA) P0AA10 (/IDA) P0AA10 (/IDA) P0AA10 (/IDA) P0AA10 (/IDA) P0AA10 (/IDA) P0AA10 (/IDA) P0AA10 (/IDA) P0AA10 (/IDA) P0AA10 (/IDA)
(262 more)
Structural constituent of ribosome GO:0003735
The action of a molecule that contributes to the structural integrity of the ribosome.
16 Q9KUF1 (/ISS) Q9KUF1 (/ISS) Q9KUF1 (/ISS) Q9KUF1 (/ISS) Q9KUF1 (/ISS) Q9KUF1 (/ISS) Q9KUF1 (/ISS) Q9KUF1 (/ISS) Q9KUF1 (/ISS) Q9KUF1 (/ISS)
(6 more)

There are 3 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Negative regulation of translation GO:0017148
Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA.
272 P0AA10 (/IEP) P0AA10 (/IEP) P0AA10 (/IEP) P0AA10 (/IEP) P0AA10 (/IEP) P0AA10 (/IEP) P0AA10 (/IEP) P0AA10 (/IEP) P0AA10 (/IEP) P0AA10 (/IEP)
(262 more)
Translation GO:0006412
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
16 Q9KUF1 (/ISS) Q9KUF1 (/ISS) Q9KUF1 (/ISS) Q9KUF1 (/ISS) Q9KUF1 (/ISS) Q9KUF1 (/ISS) Q9KUF1 (/ISS) Q9KUF1 (/ISS) Q9KUF1 (/ISS) Q9KUF1 (/ISS)
(6 more)
Response to cytokinin GO:0009735
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokinin stimulus.
2 Q9SYL9 (/IDA) Q9SYL9 (/IDA)

There are 10 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
272 P0AA10 (/IDA) P0AA10 (/IDA) P0AA10 (/IDA) P0AA10 (/IDA) P0AA10 (/IDA) P0AA10 (/IDA) P0AA10 (/IDA) P0AA10 (/IDA) P0AA10 (/IDA) P0AA10 (/IDA)
(262 more)
Cytosolic large ribosomal subunit GO:0022625
The large subunit of a ribosome located in the cytosol.
272 P0AA10 (/IDA) P0AA10 (/IDA) P0AA10 (/IDA) P0AA10 (/IDA) P0AA10 (/IDA) P0AA10 (/IDA) P0AA10 (/IDA) P0AA10 (/IDA) P0AA10 (/IDA) P0AA10 (/IDA)
(262 more)
Cytosolic large ribosomal subunit GO:0022625
The large subunit of a ribosome located in the cytosol.
16 Q9KUF1 (/ISS) Q9KUF1 (/ISS) Q9KUF1 (/ISS) Q9KUF1 (/ISS) Q9KUF1 (/ISS) Q9KUF1 (/ISS) Q9KUF1 (/ISS) Q9KUF1 (/ISS) Q9KUF1 (/ISS) Q9KUF1 (/ISS)
(6 more)
Cell wall GO:0005618
The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
12 P9WHE1 (/HDA) P9WHE1 (/HDA) P9WHE1 (/HDA) P9WHE1 (/HDA) P9WHE1 (/HDA) P9WHE1 (/HDA) P9WHE1 (/HDA) P9WHE1 (/HDA) P9WHE1 (/HDA) P9WHE1 (/HDA)
(2 more)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
12 P9WHE1 (/HDA) P9WHE1 (/HDA) P9WHE1 (/HDA) P9WHE1 (/HDA) P9WHE1 (/HDA) P9WHE1 (/HDA) P9WHE1 (/HDA) P9WHE1 (/HDA) P9WHE1 (/HDA) P9WHE1 (/HDA)
(2 more)
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
12 P9WHE1 (/HDA) P9WHE1 (/HDA) P9WHE1 (/HDA) P9WHE1 (/HDA) P9WHE1 (/HDA) P9WHE1 (/HDA) P9WHE1 (/HDA) P9WHE1 (/HDA) P9WHE1 (/HDA) P9WHE1 (/HDA)
(2 more)
Chloroplast GO:0009507
A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
2 Q9SYL9 (/IDA) Q9SYL9 (/IDA)
Chloroplast stroma GO:0009570
The space enclosed by the double membrane of a chloroplast but excluding the thylakoid space. It contains DNA, ribosomes and some temporary products of photosynthesis.
2 Q9SYL9 (/IDA) Q9SYL9 (/IDA)
Thylakoid GO:0009579
A membranous cellular structure that bears the photosynthetic pigments in plants, algae, and cyanobacteria. In cyanobacteria thylakoids are of various shapes and are attached to, or continuous with, the plasma membrane. In eukaryotes they are flattened, membrane-bounded disk-like structures located in the chloroplasts; in the chloroplasts of higher plants the thylakoids form dense stacks called grana. Isolated thylakoid preparations can carry out photosynthetic electron transport and the associated phosphorylation.
2 Q9SYL9 (/IDA) Q9SYL9 (/IDA)
Chloroplast envelope GO:0009941
The double lipid bilayer enclosing the chloroplast and separating its contents from the rest of the cytoplasm; includes the intermembrane space.
2 Q9SYL9 (/IDA) Q9SYL9 (/IDA)
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