The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 9: Vacuolar protein sorting-associated protein 29

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 1 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
38 Q9QZ88 (/IPI) Q9QZ88 (/IPI) Q9QZ88 (/IPI) Q9QZ88 (/IPI) Q9QZ88 (/IPI) Q9QZ88 (/IPI) Q9QZ88 (/IPI) Q9QZ88 (/IPI) Q9QZ88 (/IPI) Q9QZ88 (/IPI)
(28 more)

There are 10 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Endocytic recycling GO:0032456
The directed movement of membrane-bounded vesicles from recycling endosomes back to the plasma membrane where they are recycled for further rounds of transport.
90 B2RZ78 (/ISS) Q3T0M0 (/ISS) Q3T0M0 (/ISS) Q3T0M0 (/ISS) Q3T0M0 (/ISS) Q3T0M0 (/ISS) Q3T0M0 (/ISS) Q3T0M0 (/ISS) Q3T0M0 (/ISS) Q3T0M0 (/ISS)
(80 more)
Retrograde transport, endosome to plasma membrane GO:1990126
The directed movement of membrane-bounded vesicles from endosomes back to the plasma membrane, a trafficking pathway that promotes the recycling of internalized transmembrane proteins.
90 B2RZ78 (/ISS) Q3T0M0 (/ISS) Q3T0M0 (/ISS) Q3T0M0 (/ISS) Q3T0M0 (/ISS) Q3T0M0 (/ISS) Q3T0M0 (/ISS) Q3T0M0 (/ISS) Q3T0M0 (/ISS) Q3T0M0 (/ISS)
(80 more)
Golgi to vacuole transport GO:0006896
The directed movement of substances from the Golgi to the vacuole.
37 Q9QZ88 (/ISS) Q9QZ88 (/ISS) Q9QZ88 (/ISS) Q9QZ88 (/ISS) Q9QZ88 (/ISS) Q9QZ88 (/ISS) Q9QZ88 (/ISS) Q9QZ88 (/ISS) Q9QZ88 (/ISS) Q9QZ88 (/ISS)
(27 more)
Endocytic recycling GO:0032456
The directed movement of membrane-bounded vesicles from recycling endosomes back to the plasma membrane where they are recycled for further rounds of transport.
37 Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO)
(27 more)
Retrograde transport, endosome to plasma membrane GO:1990126
The directed movement of membrane-bounded vesicles from endosomes back to the plasma membrane, a trafficking pathway that promotes the recycling of internalized transmembrane proteins.
37 Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO)
(27 more)
Retrograde transport, endosome to Golgi GO:0042147
The directed movement of membrane-bounded vesicles from endosomes back to the trans-Golgi network where they are recycled for further rounds of transport.
10 Q2XYI2 (/ISS) Q2XYI2 (/ISS) Q2XYI2 (/ISS) Q2XYI2 (/ISS) Q9VPX5 (/ISS) Q9VPX5 (/ISS) Q9VPX5 (/ISS) Q9VPX5 (/ISS) Q9VPX5 (/ISS) Q9VPX5 (/ISS)
Wnt signaling pathway GO:0016055
The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state.
1 Q9UBQ0 (/TAS)
Endocytic recycling GO:0032456
The directed movement of membrane-bounded vesicles from recycling endosomes back to the plasma membrane where they are recycled for further rounds of transport.
1 Q9UBQ0 (/IMP)
Retrograde transport, endosome to Golgi GO:0042147
The directed movement of membrane-bounded vesicles from endosomes back to the trans-Golgi network where they are recycled for further rounds of transport.
1 Q9UBQ0 (/NAS)
Retrograde transport, endosome to plasma membrane GO:1990126
The directed movement of membrane-bounded vesicles from endosomes back to the plasma membrane, a trafficking pathway that promotes the recycling of internalized transmembrane proteins.
1 Q9UBQ0 (/IMP)

There are 16 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Retromer complex GO:0030904
A conserved hetero-pentameric membrane-associated complex involved in retrograde transport from endosomes to the Golgi apparatus. The budding yeast retromer comprises Vps35p, Vps29p, Vps26p, Vps5p, and Vps17p. The mammalian complex shows slight variation in composition compared to yeast, and comprises SNX1 or SNX2, SNX5 or SNX6, VPS26A or VPS26B, VPS29, and VPS35.
53 B2RZ78 (/ISS) Q3T0M0 (/ISS) Q3T0M0 (/ISS) Q3T0M0 (/ISS) Q3T0M0 (/ISS) Q3T0M0 (/ISS) Q3T0M0 (/ISS) Q3T0M0 (/ISS) Q3T0M0 (/ISS) Q3T0M0 (/ISS)
(43 more)
Retromer complex GO:0030904
A conserved hetero-pentameric membrane-associated complex involved in retrograde transport from endosomes to the Golgi apparatus. The budding yeast retromer comprises Vps35p, Vps29p, Vps26p, Vps5p, and Vps17p. The mammalian complex shows slight variation in composition compared to yeast, and comprises SNX1 or SNX2, SNX5 or SNX6, VPS26A or VPS26B, VPS29, and VPS35.
38 Q9QZ88 (/IDA) Q9QZ88 (/IDA) Q9QZ88 (/IDA) Q9QZ88 (/IDA) Q9QZ88 (/IDA) Q9QZ88 (/IDA) Q9QZ88 (/IDA) Q9QZ88 (/IDA) Q9QZ88 (/IDA) Q9QZ88 (/IDA)
(28 more)
Endosome GO:0005768
A vacuole to which materials ingested by endocytosis are delivered.
37 Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO)
(27 more)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
37 Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO)
(27 more)
Retromer complex GO:0030904
A conserved hetero-pentameric membrane-associated complex involved in retrograde transport from endosomes to the Golgi apparatus. The budding yeast retromer comprises Vps35p, Vps29p, Vps26p, Vps5p, and Vps17p. The mammalian complex shows slight variation in composition compared to yeast, and comprises SNX1 or SNX2, SNX5 or SNX6, VPS26A or VPS26B, VPS29, and VPS35.
37 Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO)
(27 more)
Retromer, cargo-selective complex GO:0030906
The trimeric subcomplex of the retromer, believed to be closely associated with the membrane. This trimeric complex is responsible for recognizing and binding to cargo molecules. The complex comprises three Vps proteins in both yeast and mammalian cells: Vps35p, Vps29p, and Vps26p in yeast, and VPS35, VPS29 and VPS26A or VPS26B in mammals.
37 Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO)
(27 more)
Intracellular membrane-bounded organelle GO:0043231
Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.
37 Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO) Q9QZ88 (/ISO)
(27 more)
Endosome GO:0005768
A vacuole to which materials ingested by endocytosis are delivered.
10 Q2XYI2 (/ISS) Q2XYI2 (/ISS) Q2XYI2 (/ISS) Q2XYI2 (/ISS) Q9VPX5 (/ISS) Q9VPX5 (/ISS) Q9VPX5 (/ISS) Q9VPX5 (/ISS) Q9VPX5 (/ISS) Q9VPX5 (/ISS)
Retromer, cargo-selective complex GO:0030906
The trimeric subcomplex of the retromer, believed to be closely associated with the membrane. This trimeric complex is responsible for recognizing and binding to cargo molecules. The complex comprises three Vps proteins in both yeast and mammalian cells: Vps35p, Vps29p, and Vps26p in yeast, and VPS35, VPS29 and VPS26A or VPS26B in mammals.
10 Q2XYI2 (/ISS) Q2XYI2 (/ISS) Q2XYI2 (/ISS) Q2XYI2 (/ISS) Q9VPX5 (/ISS) Q9VPX5 (/ISS) Q9VPX5 (/ISS) Q9VPX5 (/ISS) Q9VPX5 (/ISS) Q9VPX5 (/ISS)
Late endosome membrane GO:0031902
The lipid bilayer surrounding a late endosome.
10 Q2XYI2 (/IDA) Q2XYI2 (/IDA) Q2XYI2 (/IDA) Q2XYI2 (/IDA) Q9VPX5 (/IDA) Q9VPX5 (/IDA) Q9VPX5 (/IDA) Q9VPX5 (/IDA) Q9VPX5 (/IDA) Q9VPX5 (/IDA)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
2 F8VXU5 (/IDA) Q9UBQ0 (/IDA)
Intracellular membrane-bounded organelle GO:0043231
Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.
2 F8VXU5 (/IDA) Q9UBQ0 (/IDA)
Endosome GO:0005768
A vacuole to which materials ingested by endocytosis are delivered.
1 Q9UBQ0 (/IDA)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
1 Q9UBQ0 (/TAS)
Retromer, cargo-selective complex GO:0030906
The trimeric subcomplex of the retromer, believed to be closely associated with the membrane. This trimeric complex is responsible for recognizing and binding to cargo molecules. The complex comprises three Vps proteins in both yeast and mammalian cells: Vps35p, Vps29p, and Vps26p in yeast, and VPS35, VPS29 and VPS26A or VPS26B in mammals.
1 Q9UBQ0 (/IDA)
Retromer, cargo-selective complex GO:0030906
The trimeric subcomplex of the retromer, believed to be closely associated with the membrane. This trimeric complex is responsible for recognizing and binding to cargo molecules. The complex comprises three Vps proteins in both yeast and mammalian cells: Vps35p, Vps29p, and Vps26p in yeast, and VPS35, VPS29 and VPS26A or VPS26B in mammals.
1 Q9UBQ0 (/NAS)
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