CATH Superfamily 3.50.30.30
The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.
FunFam 12: E3 ubiquitin-protein ligase RNF13
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 4 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Ubiquitin-protein transferase activity GO:0004842
Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.
|
24 |
O43567 (/ISS)
O43567 (/ISS)
O43567 (/ISS)
O43567 (/ISS)
O43567 (/ISS)
O43567 (/ISS)
O43567 (/ISS)
O43567 (/ISS)
O43567 (/ISS)
O43567 (/ISS)
(14 more) |
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
10 | O43567 (/IPI) O43567 (/IPI) O43567 (/IPI) O43567 (/IPI) O43567 (/IPI) O43567 (/IPI) O43567 (/IPI) O43567 (/IPI) O43567 (/IPI) O43567 (/IPI) |
Ubiquitin-protein transferase activity GO:0004842
Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.
|
1 | O54965 (/IDA) |
Ubiquitin protein ligase activity GO:0061630
Catalysis of the transfer of ubiquitin to a substrate protein via the reaction X-ubiquitin + S -> X + S-ubiquitin, where X is either an E2 or E3 enzyme, the X-ubiquitin linkage is a thioester bond, and the S-ubiquitin linkage is an amide bond: an isopeptide bond between the C-terminal glycine of ubiquitin and the epsilon-amino group of lysine residues in the substrate or, in the linear extension of ubiquitin chains, a peptide bond the between the C-terminal glycine and N-terminal methionine of ubiquitin residues.
|
1 | O54965 (/IDA) |
There are 2 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Protein autoubiquitination GO:0051865
The ubiquitination by a protein of one or more of its own amino acid residues, or residues on an identical protein. Ubiquitination occurs on the lysine residue by formation of an isopeptide crosslink.
|
24 |
O43567 (/ISS)
O43567 (/ISS)
O43567 (/ISS)
O43567 (/ISS)
O43567 (/ISS)
O43567 (/ISS)
O43567 (/ISS)
O43567 (/ISS)
O43567 (/ISS)
O43567 (/ISS)
(14 more) |
Protein autoubiquitination GO:0051865
The ubiquitination by a protein of one or more of its own amino acid residues, or residues on an identical protein. Ubiquitination occurs on the lysine residue by formation of an isopeptide crosslink.
|
1 | O54965 (/IDA) |
There are 11 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Lysosomal membrane GO:0005765
The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm.
|
23 |
O43567 (/ISS)
O43567 (/ISS)
O43567 (/ISS)
O43567 (/ISS)
O43567 (/ISS)
O43567 (/ISS)
O43567 (/ISS)
O43567 (/ISS)
O43567 (/ISS)
O43567 (/ISS)
(13 more) |
Late endosome membrane GO:0031902
The lipid bilayer surrounding a late endosome.
|
23 |
O43567 (/ISS)
O43567 (/ISS)
O43567 (/ISS)
O43567 (/ISS)
O43567 (/ISS)
O43567 (/ISS)
O43567 (/ISS)
O43567 (/ISS)
O43567 (/ISS)
O43567 (/ISS)
(13 more) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
10 | O43567 (/IDA) O43567 (/IDA) O43567 (/IDA) O43567 (/IDA) O43567 (/IDA) O43567 (/IDA) O43567 (/IDA) O43567 (/IDA) O43567 (/IDA) O43567 (/IDA) |
Lysosomal membrane GO:0005765
The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm.
|
10 | O43567 (/HDA) O43567 (/HDA) O43567 (/HDA) O43567 (/HDA) O43567 (/HDA) O43567 (/HDA) O43567 (/HDA) O43567 (/HDA) O43567 (/HDA) O43567 (/HDA) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
10 | O43567 (/IDA) O43567 (/IDA) O43567 (/IDA) O43567 (/IDA) O43567 (/IDA) O43567 (/IDA) O43567 (/IDA) O43567 (/IDA) O43567 (/IDA) O43567 (/IDA) |
Intracellular membrane-bounded organelle GO:0043231
Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.
|
10 | O43567 (/IDA) O43567 (/IDA) O43567 (/IDA) O43567 (/IDA) O43567 (/IDA) O43567 (/IDA) O43567 (/IDA) O43567 (/IDA) O43567 (/IDA) O43567 (/IDA) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
1 | O54965 (/ISO) |
Lysosomal membrane GO:0005765
The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm.
|
1 | O54965 (/IDA) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
1 | O54965 (/ISO) |
Late endosome membrane GO:0031902
The lipid bilayer surrounding a late endosome.
|
1 | O54965 (/IDA) |
Intracellular membrane-bounded organelle GO:0043231
Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.
|
1 | O54965 (/ISO) |