The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"VSR Endonuclease
".
FunFam 1: Very short patch repair endonuclease
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 3 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
DNA binding GO:0003677
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
|
10 | P09184 (/IDA) P09184 (/IDA) P09184 (/IDA) P09184 (/IDA) P09184 (/IDA) P09184 (/IDA) P09184 (/IDA) P09184 (/IDA) P09184 (/IDA) P09184 (/IDA) |
|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
10 | P09184 (/IPI) P09184 (/IPI) P09184 (/IPI) P09184 (/IPI) P09184 (/IPI) P09184 (/IPI) P09184 (/IPI) P09184 (/IPI) P09184 (/IPI) P09184 (/IPI) |
|
T/G mismatch-specific endonuclease activity GO:0043765
Catalysis of the repair of T/G mismatches arising from deamination of 5-methylcytosine in DNA by nicking double-stranded DNA within the sequence CT(AT)GN or NT(AT)GG next to the mismatched thymidine residue. The incision is mismatch-dependent and strand-specific, in favor of the G-containing strand. The incision serves as a starting point for subsequent excision repair by DNA polymerase I, which excises thymidine and reinserts cytidine.
|
10 | P09184 (/IDA) P09184 (/IDA) P09184 (/IDA) P09184 (/IDA) P09184 (/IDA) P09184 (/IDA) P09184 (/IDA) P09184 (/IDA) P09184 (/IDA) P09184 (/IDA) |
There are 1 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Mismatch repair GO:0006298
A system for the correction of errors in which an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination.
|
10 | P09184 (/IDA) P09184 (/IDA) P09184 (/IDA) P09184 (/IDA) P09184 (/IDA) P09184 (/IDA) P09184 (/IDA) P09184 (/IDA) P09184 (/IDA) P09184 (/IDA) |
There are 0 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
