The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.
FunFam 2: Histone acetyltransferase
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 41 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
88 |
E2RE71 (/IPI)
E2RE71 (/IPI)
E2RE71 (/IPI)
E2RE71 (/IPI)
E2RE71 (/IPI)
E2RE71 (/IPI)
E2RE71 (/IPI)
E2RE71 (/IPI)
E2RE71 (/IPI)
E2RE71 (/IPI)
(78 more) |
Transcription coactivator activity GO:0003713
A protein or a member of a complex that interacts specifically and non-covalently with a DNA-bound DNA-binding transcription factor to activate the transcription of specific genes. Coactivators often act by altering chromatin structure and modifications. For example, one class of transcription coregulators modifies chromatin structure through covalent modification of histones. A second ATP-dependent class modifies the conformation of chromatin. Another type of coregulator activity is the bridging of a DNA-binding transcription factor to the basal transcription machinery. The Mediator complex, which bridges transcription factors and RNA polymerase, is also a transcription coactivator.
|
56 |
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
(46 more) |
Transcription coactivator activity GO:0003713
A protein or a member of a complex that interacts specifically and non-covalently with a DNA-bound DNA-binding transcription factor to activate the transcription of specific genes. Coactivators often act by altering chromatin structure and modifications. For example, one class of transcription coregulators modifies chromatin structure through covalent modification of histones. A second ATP-dependent class modifies the conformation of chromatin. Another type of coregulator activity is the bridging of a DNA-binding transcription factor to the basal transcription machinery. The Mediator complex, which bridges transcription factors and RNA polymerase, is also a transcription coactivator.
|
41 |
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
(31 more) |
Peptide-lysine-N-acetyltransferase activity GO:0061733
Catalysis of the reaction: acetyl-CoA + lysine in peptide = CoA + N-acetyl-lysine-peptide.
|
41 |
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
(31 more) |
Histone acetyltransferase activity GO:0004402
Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone.
|
33 |
O02193 (/IDA)
Q08649 (/IDA)
Q08649 (/IDA)
Q08649 (/IDA)
Q08649 (/IDA)
Q08649 (/IDA)
Q08649 (/IDA)
Q08649 (/IDA)
Q08649 (/IDA)
Q92993 (/IDA)
(23 more) |
Peptide-lysine-N-acetyltransferase activity GO:0061733
Catalysis of the reaction: acetyl-CoA + lysine in peptide = CoA + N-acetyl-lysine-peptide.
|
33 |
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
(23 more) |
Histone acetyltransferase activity GO:0004402
Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone.
|
28 |
Q08649 (/IMP)
Q08649 (/IMP)
Q08649 (/IMP)
Q08649 (/IMP)
Q08649 (/IMP)
Q08649 (/IMP)
Q08649 (/IMP)
Q08649 (/IMP)
Q92993 (/IMP)
Q92993 (/IMP)
(18 more) |
Chromatin binding GO:0003682
Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.
|
24 |
O02193 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
(14 more) |
Histone acetyltransferase activity GO:0004402
Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone.
|
24 |
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
(14 more) |
Transcription factor binding GO:0008134
Interacting selectively and non-covalently with a transcription factor, a protein required to initiate or regulate transcription.
|
24 |
Q99MK2 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
(14 more) |
Transcription factor binding GO:0008134
Interacting selectively and non-covalently with a transcription factor, a protein required to initiate or regulate transcription.
|
24 |
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
(14 more) |
Chromatin binding GO:0003682
Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.
|
23 |
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
(13 more) |
Transcription coactivator activity GO:0003713
A protein or a member of a complex that interacts specifically and non-covalently with a DNA-bound DNA-binding transcription factor to activate the transcription of specific genes. Coactivators often act by altering chromatin structure and modifications. For example, one class of transcription coregulators modifies chromatin structure through covalent modification of histones. A second ATP-dependent class modifies the conformation of chromatin. Another type of coregulator activity is the bridging of a DNA-binding transcription factor to the basal transcription machinery. The Mediator complex, which bridges transcription factors and RNA polymerase, is also a transcription coactivator.
|
23 |
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
(13 more) |
Histone acetyltransferase activity GO:0004402
Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone.
|
23 |
Q99MK2 (/NAS)
Q99MK2 (/NAS)
Q99MK2 (/NAS)
Q99MK2 (/NAS)
Q99MK2 (/NAS)
Q99MK2 (/NAS)
Q99MK2 (/NAS)
Q99MK2 (/NAS)
Q99MK2 (/NAS)
Q99MK2 (/NAS)
(13 more) |
Phospholipase binding GO:0043274
Interacting selectively and non-covalently with any phospholipase, enzymes that catalyze of the hydrolysis of a glycerophospholipid.
|
23 |
Q99MK2 (/IPI)
Q99MK2 (/IPI)
Q99MK2 (/IPI)
Q99MK2 (/IPI)
Q99MK2 (/IPI)
Q99MK2 (/IPI)
Q99MK2 (/IPI)
Q99MK2 (/IPI)
Q99MK2 (/IPI)
Q99MK2 (/IPI)
(13 more) |
Phospholipase binding GO:0043274
Interacting selectively and non-covalently with any phospholipase, enzymes that catalyze of the hydrolysis of a glycerophospholipid.
|
23 |
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
(13 more) |
Protein-containing complex binding GO:0044877
Interacting selectively and non-covalently with a macromolecular complex.
|
23 |
Q99MK2 (/IPI)
Q99MK2 (/IPI)
Q99MK2 (/IPI)
Q99MK2 (/IPI)
Q99MK2 (/IPI)
Q99MK2 (/IPI)
Q99MK2 (/IPI)
Q99MK2 (/IPI)
Q99MK2 (/IPI)
Q99MK2 (/IPI)
(13 more) |
Protein-containing complex binding GO:0044877
Interacting selectively and non-covalently with a macromolecular complex.
|
23 |
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
(13 more) |
Peptide-lysine-N-acetyltransferase activity GO:0061733
Catalysis of the reaction: acetyl-CoA + lysine in peptide = CoA + N-acetyl-lysine-peptide.
|
23 |
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
(13 more) |
Repressing transcription factor binding GO:0070491
Interacting selectively and non-covalently with a transcription repressor, any protein whose activity is required to prevent or downregulate transcription.
|
23 |
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
(13 more) |
Transcription coactivator activity GO:0003713
A protein or a member of a complex that interacts specifically and non-covalently with a DNA-bound DNA-binding transcription factor to activate the transcription of specific genes. Coactivators often act by altering chromatin structure and modifications. For example, one class of transcription coregulators modifies chromatin structure through covalent modification of histones. A second ATP-dependent class modifies the conformation of chromatin. Another type of coregulator activity is the bridging of a DNA-binding transcription factor to the basal transcription machinery. The Mediator complex, which bridges transcription factors and RNA polymerase, is also a transcription coactivator.
|
18 |
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
(8 more) |
Acetyltransferase activity GO:0016407
Catalysis of the transfer of an acetyl group to an acceptor molecule.
|
18 |
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
(8 more) |
Androgen receptor binding GO:0050681
Interacting selectively and non-covalently with an androgen receptor.
|
18 |
Q92993 (/NAS)
Q92993 (/NAS)
Q92993 (/NAS)
Q92993 (/NAS)
Q92993 (/NAS)
Q92993 (/NAS)
Q92993 (/NAS)
Q92993 (/NAS)
Q92993 (/NAS)
Q92993 (/NAS)
(8 more) |
Repressing transcription factor binding GO:0070491
Interacting selectively and non-covalently with a transcription repressor, any protein whose activity is required to prevent or downregulate transcription.
|
18 |
Q92993 (/IPI)
Q92993 (/IPI)
Q92993 (/IPI)
Q92993 (/IPI)
Q92993 (/IPI)
Q92993 (/IPI)
Q92993 (/IPI)
Q92993 (/IPI)
Q92993 (/IPI)
Q92993 (/IPI)
(8 more) |
H4 histone acetyltransferase activity GO:0010485
Catalysis of the reaction: acetyl-CoA + histone H4 = CoA + acetyl-histone H4.
|
8 | Q08649 (/IDA) Q08649 (/IDA) Q08649 (/IDA) Q08649 (/IDA) Q08649 (/IDA) Q08649 (/IDA) Q08649 (/IDA) Q08649 (/IDA) |
Peptide N-acetyltransferase activity GO:0034212
Catalysis of the acetylation of an amino acid residue of a peptide or protein, according to the reaction: acetyl-CoA + peptide = CoA + N-acetylpeptide.
|
8 | Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) |
Acetyltransferase activity GO:0016407
Catalysis of the transfer of an acetyl group to an acceptor molecule.
|
2 | Q9D1P2 (/IDA) Q9H7Z6 (/IDA) |
Euchromatin binding GO:1990188
Interacting selectively and non-covalently with euchromatin, a dispersed and relatively uncompacted form of chromatin.
|
2 | Q960X4 (/IDA) Q960X4 (/IDA) |
MRNA binding GO:0003729
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
|
1 | O02193 (/TAS) |
Histone acetyltransferase activity GO:0004402
Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone.
|
1 | O02193 (/ISS) |
Histone acetyltransferase activity GO:0004402
Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone.
|
1 | O02193 (/TAS) |
Lysine N-acetyltransferase activity, acting on acetyl phosphate as donor GO:0004468
Catalysis of the reaction: acetyl phosphate + L-lysine = phosphate + N6-acetyl-L-lysine.
|
1 | O02193 (/TAS) |
H4 histone acetyltransferase activity GO:0010485
Catalysis of the reaction: acetyl-CoA + histone H4 = CoA + acetyl-histone H4.
|
1 | O94446 (/ISO) |
Acetyltransferase activity GO:0016407
Catalysis of the transfer of an acetyl group to an acceptor molecule.
|
1 | Q9D1P2 (/ISO) |
Enzyme binding GO:0019899
Interacting selectively and non-covalently with any enzyme.
|
1 | Q9D1P2 (/IPI) |
Methylated histone binding GO:0035064
Interacting selectively and non-covalently with a histone in which a residue has been modified by methylation. Histones are any of a group of water-soluble proteins found in association with the DNA of eukaroytic chromosomes.
|
1 | Q9H7Z6 (/IDA) |
Methylated histone binding GO:0035064
Interacting selectively and non-covalently with a histone in which a residue has been modified by methylation. Histones are any of a group of water-soluble proteins found in association with the DNA of eukaroytic chromosomes.
|
1 | Q9D1P2 (/ISO) |
Histone acetyltransferase activity (H4-K5 specific) GO:0043995
Catalysis of the reaction: acetyl-CoA + histone H4 L-lysine (position 5) = CoA + histone H4 N6-acetyl-L-lysine (position 5).
|
1 | Q9FLF7 (/IMP) |
Histone acetyltransferase activity (H3-K4 specific) GO:0044016
Catalysis of the reaction: acetyl-CoA + histone H3 L-lysine (position 4) = CoA + histone H3 N6-acetyl-L-lysine (position 4).
|
1 | O94446 (/IDA) |
Histone acetyltransferase activity (H4-K16 specific) GO:0046972
Catalysis of the reaction: acetyl-CoA + histone H4 L-lysine (position 16) = CoA + histone H4 N6-acetyl-L-lysine (position 16). This reaction represents the addition of an acetyl group to the lysine at position 16 of histone H4.
|
1 | O02193 (/IMP) |
Histone acetyltransferase activity (H4-K16 specific) GO:0046972
Catalysis of the reaction: acetyl-CoA + histone H4 L-lysine (position 16) = CoA + histone H4 N6-acetyl-L-lysine (position 16). This reaction represents the addition of an acetyl group to the lysine at position 16 of histone H4.
|
1 | O02193 (/TAS) |
There are 115 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Positive regulation of transcription, DNA-templated GO:0045893
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
|
58 |
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
(48 more) |
DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator GO:0006978
A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, resulting in the induction of the transcription of p21 (also known as WAF1, CIP1 and SDI1) or any equivalent protein, in response to the detection of DNA damage.
|
56 |
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
(46 more) |
Positive regulation of autophagy GO:0010508
Any process that activates, maintains or increases the rate of autophagy. Autophagy is the process in which cells digest parts of their own cytoplasm.
|
41 |
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
(31 more) |
Peptidyl-lysine acetylation GO:0018394
The acetylation of peptidyl-lysine.
|
41 |
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
(31 more) |
Positive regulation of autophagy GO:0010508
Any process that activates, maintains or increases the rate of autophagy. Autophagy is the process in which cells digest parts of their own cytoplasm.
|
33 |
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
(23 more) |
Peptidyl-lysine acetylation GO:0018394
The acetylation of peptidyl-lysine.
|
33 |
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
(23 more) |
Histone acetylation GO:0016573
The modification of a histone by the addition of an acetyl group.
|
29 |
Q08649 (/IDA)
Q08649 (/IDA)
Q08649 (/IDA)
Q08649 (/IDA)
Q08649 (/IDA)
Q08649 (/IDA)
Q08649 (/IDA)
Q08649 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
(19 more) |
Histone acetylation GO:0016573
The modification of a histone by the addition of an acetyl group.
|
24 |
C8VBH4 (/IMP)
Q99MK2 (/IMP)
Q99MK2 (/IMP)
Q99MK2 (/IMP)
Q99MK2 (/IMP)
Q99MK2 (/IMP)
Q99MK2 (/IMP)
Q99MK2 (/IMP)
Q99MK2 (/IMP)
Q99MK2 (/IMP)
(14 more) |
Histone acetylation GO:0016573
The modification of a histone by the addition of an acetyl group.
|
24 |
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
(14 more) |
Negative regulation of transcription, DNA-templated GO:0045892
Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.
|
24 |
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
(14 more) |
Positive regulation of transcription, DNA-templated GO:0045893
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
|
24 |
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
(14 more) |
Negative regulation of transcription by RNA polymerase II GO:0000122
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II.
|
23 |
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
(13 more) |
Double-strand break repair GO:0006302
The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix.
|
23 |
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
(13 more) |
Regulation of transcription, DNA-templated GO:0006355
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
|
23 |
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
(13 more) |
Apoptotic process GO:0006915
A programmed cell death process which begins when a cell receives an internal (e.g. DNA damage) or external signal (e.g. an extracellular death ligand), and proceeds through a series of biochemical events (signaling pathway phase) which trigger an execution phase. The execution phase is the last step of an apoptotic process, and is typically characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died.
|
23 |
Q99MK2 (/IEP)
Q99MK2 (/IEP)
Q99MK2 (/IEP)
Q99MK2 (/IEP)
Q99MK2 (/IEP)
Q99MK2 (/IEP)
Q99MK2 (/IEP)
Q99MK2 (/IEP)
Q99MK2 (/IEP)
Q99MK2 (/IEP)
(13 more) |
DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator GO:0006978
A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, resulting in the induction of the transcription of p21 (also known as WAF1, CIP1 and SDI1) or any equivalent protein, in response to the detection of DNA damage.
|
23 |
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
(13 more) |
Response to heat GO:0009408
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.
|
23 |
Q99MK2 (/IEP)
Q99MK2 (/IEP)
Q99MK2 (/IEP)
Q99MK2 (/IEP)
Q99MK2 (/IEP)
Q99MK2 (/IEP)
Q99MK2 (/IEP)
Q99MK2 (/IEP)
Q99MK2 (/IEP)
Q99MK2 (/IEP)
(13 more) |
Response to ionizing radiation GO:0010212
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays.
|
23 |
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
(13 more) |
Positive regulation of autophagy GO:0010508
Any process that activates, maintains or increases the rate of autophagy. Autophagy is the process in which cells digest parts of their own cytoplasm.
|
23 |
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
(13 more) |
Peptidyl-lysine acetylation GO:0018394
The acetylation of peptidyl-lysine.
|
23 |
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
(13 more) |
Negative regulation of interleukin-2 production GO:0032703
Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-2 production.
|
23 |
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
(13 more) |
Proteasome-mediated ubiquitin-dependent protein catabolic process GO:0043161
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.
|
23 |
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
(13 more) |
Histone H4 acetylation GO:0043967
The modification of histone H4 by the addition of an acetyl group.
|
23 |
Q99MK2 (/NAS)
Q99MK2 (/NAS)
Q99MK2 (/NAS)
Q99MK2 (/NAS)
Q99MK2 (/NAS)
Q99MK2 (/NAS)
Q99MK2 (/NAS)
Q99MK2 (/NAS)
Q99MK2 (/NAS)
Q99MK2 (/NAS)
(13 more) |
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
|
23 |
Q99MK2 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
(13 more) |
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
|
23 |
Q8CHK4 (/IGI)
Q8CHK4 (/IGI)
Q8CHK4 (/IGI)
Q8CHK4 (/IGI)
Q8CHK4 (/IGI)
Q8CHK4 (/IGI)
Q8CHK4 (/IGI)
Q8CHK4 (/IGI)
Q8CHK4 (/IGI)
Q8CHK4 (/IGI)
(13 more) |
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
|
23 |
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
(13 more) |
Cellular response to hydrogen peroxide GO:0070301
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen peroxide (H2O2) stimulus.
|
23 |
Q99MK2 (/IEP)
Q99MK2 (/IEP)
Q99MK2 (/IEP)
Q99MK2 (/IEP)
Q99MK2 (/IEP)
Q99MK2 (/IEP)
Q99MK2 (/IEP)
Q99MK2 (/IEP)
Q99MK2 (/IEP)
Q99MK2 (/IEP)
(13 more) |
Cellular response to estradiol stimulus GO:0071392
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by estradiol, a C18 steroid hormone hydroxylated at C3 and C17 that acts as a potent estrogen.
|
23 |
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
(13 more) |
Cellular response to X-ray GO:0071481
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz).
|
23 |
Q99MK2 (/IEP)
Q99MK2 (/IEP)
Q99MK2 (/IEP)
Q99MK2 (/IEP)
Q99MK2 (/IEP)
Q99MK2 (/IEP)
Q99MK2 (/IEP)
Q99MK2 (/IEP)
Q99MK2 (/IEP)
Q99MK2 (/IEP)
(13 more) |
Positive regulation of protein acetylation GO:1901985
Any process that activates or increases the frequency, rate or extent of protein acetylation.
|
23 |
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
(13 more) |
Negative regulation of transcription, DNA-templated GO:0045892
Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.
|
19 |
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
(9 more) |
Positive regulation of transcription, DNA-templated GO:0045893
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
|
19 |
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
(9 more) |
Negative regulation of transcription by RNA polymerase II GO:0000122
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II.
|
18 |
Q92993 (/IMP)
Q92993 (/IMP)
Q92993 (/IMP)
Q92993 (/IMP)
Q92993 (/IMP)
Q92993 (/IMP)
Q92993 (/IMP)
Q92993 (/IMP)
Q92993 (/IMP)
Q92993 (/IMP)
(8 more) |
DNA double-strand break processing GO:0000729
The 5' to 3' exonucleolytic resection of the DNA at the site of the break to form a 3' single-strand DNA overhang.
|
18 |
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
(8 more) |
DNA replication GO:0006260
The cellular metabolic process in which a cell duplicates one or more molecules of DNA. DNA replication begins when specific sequences, known as origins of replication, are recognized and bound by initiation proteins, and ends when the original DNA molecule has been completely duplicated and the copies topologically separated. The unit of replication usually corresponds to the genome of the cell, an organelle, or a virus. The template for replication can either be an existing DNA molecule or RNA.
|
18 |
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
(8 more) |
Double-strand break repair GO:0006302
The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix.
|
18 |
Q92993 (/IMP)
Q92993 (/IMP)
Q92993 (/IMP)
Q92993 (/IMP)
Q92993 (/IMP)
Q92993 (/IMP)
Q92993 (/IMP)
Q92993 (/IMP)
Q92993 (/IMP)
Q92993 (/IMP)
(8 more) |
Double-strand break repair via nonhomologous end joining GO:0006303
The repair of a double-strand break in DNA in which the two broken ends are rejoined with little or no sequence complementarity. Information at the DNA ends may be lost due to the modification of broken DNA ends. This term covers instances of separate pathways, called classical (or canonical) and alternative nonhomologous end joining (C-NHEJ and A-NHEJ). These in turn may further branch into sub-pathways, but evidence is still unclear.
|
18 |
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
(8 more) |
DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator GO:0006978
A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, resulting in the induction of the transcription of p21 (also known as WAF1, CIP1 and SDI1) or any equivalent protein, in response to the detection of DNA damage.
|
18 |
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
(8 more) |
Response to ionizing radiation GO:0010212
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays.
|
18 |
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
(8 more) |
Androgen receptor signaling pathway GO:0030521
Any series of molecular signals generated as a consequence of an androgen binding to its receptor.
|
18 |
Q92993 (/NAS)
Q92993 (/NAS)
Q92993 (/NAS)
Q92993 (/NAS)
Q92993 (/NAS)
Q92993 (/NAS)
Q92993 (/NAS)
Q92993 (/NAS)
Q92993 (/NAS)
Q92993 (/NAS)
(8 more) |
Negative regulation of interleukin-2 production GO:0032703
Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-2 production.
|
18 |
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
(8 more) |
Proteasome-mediated ubiquitin-dependent protein catabolic process GO:0043161
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.
|
18 |
Q92993 (/IMP)
Q92993 (/IMP)
Q92993 (/IMP)
Q92993 (/IMP)
Q92993 (/IMP)
Q92993 (/IMP)
Q92993 (/IMP)
Q92993 (/IMP)
Q92993 (/IMP)
Q92993 (/IMP)
(8 more) |
Positive regulation of transcription, DNA-templated GO:0045893
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
|
18 |
Q92993 (/NAS)
Q92993 (/NAS)
Q92993 (/NAS)
Q92993 (/NAS)
Q92993 (/NAS)
Q92993 (/NAS)
Q92993 (/NAS)
Q92993 (/NAS)
Q92993 (/NAS)
Q92993 (/NAS)
(8 more) |
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
|
18 |
Q92993 (/IMP)
Q92993 (/IMP)
Q92993 (/IMP)
Q92993 (/IMP)
Q92993 (/IMP)
Q92993 (/IMP)
Q92993 (/IMP)
Q92993 (/IMP)
Q92993 (/IMP)
Q92993 (/IMP)
(8 more) |
Cellular response to estradiol stimulus GO:0071392
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by estradiol, a C18 steroid hormone hydroxylated at C3 and C17 that acts as a potent estrogen.
|
18 |
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
(8 more) |
Regulation of signal transduction by p53 class mediator GO:1901796
Any process that modulates the frequency, rate or extent of signal transduction by p53 class mediator.
|
18 |
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
(8 more) |
Positive regulation of protein acetylation GO:1901985
Any process that activates or increases the frequency, rate or extent of protein acetylation.
|
18 |
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
(8 more) |
Beta-catenin-TCF complex assembly GO:1904837
The aggregation, arrangement and bonding together of a set of components to form a beta-catenin-TCF complex.
|
18 |
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
(8 more) |
DNA repair GO:0006281
The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway.
|
12 |
O02193 (/IMP)
Q08649 (/IMP)
Q08649 (/IMP)
Q08649 (/IMP)
Q08649 (/IMP)
Q08649 (/IMP)
Q08649 (/IMP)
Q08649 (/IMP)
Q08649 (/IMP)
Q9FLF7 (/IMP)
(2 more) |
Chromatin silencing at rDNA GO:0000183
Repression of transcription of ribosomal DNA by altering the structure of chromatin.
|
8 | Q08649 (/IGI) Q08649 (/IGI) Q08649 (/IGI) Q08649 (/IGI) Q08649 (/IGI) Q08649 (/IGI) Q08649 (/IGI) Q08649 (/IGI) |
Chromatin silencing at rDNA GO:0000183
Repression of transcription of ribosomal DNA by altering the structure of chromatin.
|
8 | Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) |
Histone displacement GO:0001207
The removal of histones, including histone dimers, from nucleosomes within chromatin.
|
8 | Q08649 (/IGI) Q08649 (/IGI) Q08649 (/IGI) Q08649 (/IGI) Q08649 (/IGI) Q08649 (/IGI) Q08649 (/IGI) Q08649 (/IGI) |
Histone displacement GO:0001207
The removal of histones, including histone dimers, from nucleosomes within chromatin.
|
8 | Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) |
DNA repair GO:0006281
The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway.
|
8 | Q08649 (/IDA) Q08649 (/IDA) Q08649 (/IDA) Q08649 (/IDA) Q08649 (/IDA) Q08649 (/IDA) Q08649 (/IDA) Q08649 (/IDA) |
DNA repair GO:0006281
The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway.
|
8 | Q08649 (/IGI) Q08649 (/IGI) Q08649 (/IGI) Q08649 (/IGI) Q08649 (/IGI) Q08649 (/IGI) Q08649 (/IGI) Q08649 (/IGI) |
DNA-templated transcription, elongation GO:0006354
The extension of an RNA molecule after transcription initiation and promoter clearance at a DNA-dependent RNA polymerase promoter by the addition of ribonucleotides catalyzed by an RNA polymerase.
|
8 | Q08649 (/IDA) Q08649 (/IDA) Q08649 (/IDA) Q08649 (/IDA) Q08649 (/IDA) Q08649 (/IDA) Q08649 (/IDA) Q08649 (/IDA) |
DNA-templated transcription, elongation GO:0006354
The extension of an RNA molecule after transcription initiation and promoter clearance at a DNA-dependent RNA polymerase promoter by the addition of ribonucleotides catalyzed by an RNA polymerase.
|
8 | Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) |
Regulation of transcription by RNA polymerase II GO:0006357
Any process that modulates the frequency, rate or extent of transcription mediated by RNA polymerase II.
|
8 | Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) |
Positive regulation of macroautophagy GO:0016239
Any process, such as recognition of nutrient depletion, that activates or increases the rate of macroautophagy to bring cytosolic macromolecules to the vacuole/lysosome for degradation.
|
8 | Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) |
Peptidyl-lysine acetylation GO:0018394
The acetylation of peptidyl-lysine.
|
8 | Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) |
Positive regulation of transcription elongation from RNA polymerase II promoter GO:0032968
Any process that activates or increases the frequency, rate or extent of transcription elongation, the extension of an RNA molecule after transcription initiation and promoter clearance by the addition of ribonucleotides, catalyzed by RNA polymerase II.
|
8 | Q08649 (/IGI) Q08649 (/IGI) Q08649 (/IGI) Q08649 (/IGI) Q08649 (/IGI) Q08649 (/IGI) Q08649 (/IGI) Q08649 (/IGI) |
Positive regulation of transcription elongation from RNA polymerase II promoter GO:0032968
Any process that activates or increases the frequency, rate or extent of transcription elongation, the extension of an RNA molecule after transcription initiation and promoter clearance by the addition of ribonucleotides, catalyzed by RNA polymerase II.
|
8 | Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) |
Regulation of cell cycle GO:0051726
Any process that modulates the rate or extent of progression through the cell cycle.
|
8 | Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) Q08649 (/IMP) |
Primitive hemopoiesis GO:0060215
A first transient wave of blood cell production that, in vertebrates, gives rise to erythrocytes (red blood cells) and myeloid cells.
|
8 | A0A0R4IZD0 (/IMP) A0A2R8QAY9 (/IMP) A0A2R8RHP9 (/IMP) A9JTB7 (/IMP) B0R0X6 (/IMP) F1QX50 (/IMP) Q6DHD0 (/IMP) Q7SXF3 (/IMP) |
Response to UV-B GO:0010224
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a UV-B radiation stimulus. UV-B radiation (UV-B light) spans the wavelengths 280 to 315 nm.
|
3 | Q9FLF7 (/IEP) Q9LXD7 (/IEP) Q9LXD7 (/IEP) |
Nervous system development GO:0007399
The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state.
|
2 | Q960X4 (/IMP) Q960X4 (/IMP) |
Regulation of gene expression GO:0010468
Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
|
2 | Q960X4 (/IMP) Q960X4 (/IMP) |
Histone exchange GO:0043486
The replacement, within chromatin, of resident histones or histone subunits with alternative, sometimes variant, histones or subunits.
|
2 | Q960X4 (/IDA) Q960X4 (/IDA) |
Negative regulation of neuron apoptotic process GO:0043524
Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process in neurons.
|
2 | Q960X4 (/IMP) Q960X4 (/IMP) |
Histone H4 acetylation GO:0043967
The modification of histone H4 by the addition of an acetyl group.
|
2 | Q960X4 (/IMP) Q960X4 (/IMP) |
Histone H4-K5 acetylation GO:0043981
The modification of histone H4 by the addition of an acetyl group to a lysine residue at position 5 of the histone.
|
2 | Q5XI06 (/ISS) Q9D1P2 (/ISS) |
Histone H4-K8 acetylation GO:0043982
The modification of histone H4 by the addition of an acetyl group to a lysine residue at position 8 of the histone.
|
2 | Q5XI06 (/ISS) Q9D1P2 (/ISS) |
Histone H4-K16 acetylation GO:0043984
The modification of histone H4 by the addition of an acetyl group to a lysine residue at position 16 of the histone.
|
2 | O02193 (/IMP) Q9H7Z6 (/IMP) |
Histone H4-K16 acetylation GO:0043984
The modification of histone H4 by the addition of an acetyl group to a lysine residue at position 16 of the histone.
|
2 | Q5XI06 (/ISS) Q9D1P2 (/ISS) |
Regulation of synaptic plasticity GO:0048167
A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers.
|
2 | Q960X4 (/IDA) Q960X4 (/IDA) |
Primitive erythrocyte differentiation GO:0060319
Erythrocyte differentiation which occurs as part of the process of primitive hemopoiesis.
|
2 | B0R0X6 (/IMP) Q6DHD0 (/IMP) |
Regulation of terminal button organization GO:2000331
Any process that modulates the frequency, rate or extent of terminal button organization.
|
2 | Q960X4 (/IDA) Q960X4 (/IDA) |
DNA damage checkpoint GO:0000077
A cell cycle checkpoint that regulates progression through the cell cycle in response to DNA damage. A DNA damage checkpoint may blocks cell cycle progression (in G1, G2 or metaphase) or slow the rate at which S phase proceeds.
|
1 | O02193 (/IMP) |
Cell fate specification GO:0001708
The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment.
|
1 | Q9TYU5 (/IGI) |
Cell fate specification GO:0001708
The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment.
|
1 | Q9TYU5 (/IMP) |
Double-strand break repair GO:0006302
The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix.
|
1 | O94446 (/IGI) |
Dosage compensation GO:0007549
Compensating for the variation in the unpaired sex chromosome:autosome chromosome ratios between sexes by activation or inactivation of genes on one or both of the sex chromosomes.
|
1 | O02193 (/IGI) |
Dosage compensation GO:0007549
Compensating for the variation in the unpaired sex chromosome:autosome chromosome ratios between sexes by activation or inactivation of genes on one or both of the sex chromosomes.
|
1 | O02193 (/IMP) |
Dosage compensation by hyperactivation of X chromosome GO:0009047
Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global hyperactivation of all, or most of, the genes on the X-chromosome in the heterogametic sex, leading to a two-fold increase in gene expression from this chromosome. An example of this is found in Drosophila melanogaster.
|
1 | O02193 (/NAS) |
Negative regulation of cell fate specification GO:0009996
Any process that restricts, stops or prevents a cell from adopting a specific cell fate.
|
1 | Q9TYU5 (/IGI) |
Negative regulation of cell fate specification GO:0009996
Any process that restricts, stops or prevents a cell from adopting a specific cell fate.
|
1 | Q9TYU5 (/IMP) |
Response to ionizing radiation GO:0010212
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays.
|
1 | O02193 (/IMP) |
Regulation of autophagy GO:0010506
Any process that modulates the frequency, rate or extent of autophagy. Autophagy is the process in which cells digest parts of their own cytoplasm.
|
1 | Q9H7Z6 (/IDA) |
Regulation of autophagy GO:0010506
Any process that modulates the frequency, rate or extent of autophagy. Autophagy is the process in which cells digest parts of their own cytoplasm.
|
1 | Q9D1P2 (/ISO) |
Histone acetylation GO:0016573
The modification of a histone by the addition of an acetyl group.
|
1 | O02193 (/TAS) |
Peptidyl-lysine acetylation GO:0018394
The acetylation of peptidyl-lysine.
|
1 | O02193 (/TAS) |
Myeloid cell differentiation GO:0030099
The process in which a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages.
|
1 | Q9H7Z6 (/IDA) |
Myeloid cell differentiation GO:0030099
The process in which a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages.
|
1 | Q9D1P2 (/ISO) |
DNA damage response, signal transduction by p53 class mediator GO:0030330
A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage.
|
1 | O02193 (/IMP) |
Negative regulation of heterochromatin assembly GO:0031452
Any process that stops, prevents, or reduces the frequency, rate or extent of heterochromatin formation.
|
1 | O94446 (/IMP) |
Positive regulation of heterochromatin assembly GO:0031453
Any process that activates or increases the frequency, rate or extent of heterochromatin formation.
|
1 | O94446 (/IMP) |
Centromere complex assembly GO:0034508
The aggregation, arrangement and bonding together of proteins and centromeric DNA molecules to form a centromeric protein-DNA complex. Includes the formation of the chromatin structures which form a platform for the kinetochore, and assembly of the kinetochore onto this specialized chromatin. In fission yeast and higher eukaryotes this process also includes the formation of heterochromatin at the outer repeat (pericentric) regions of the centromere.
|
1 | O94446 (/IGI) |
Negative regulation of apoptotic process GO:0043066
Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process.
|
1 | O02193 (/IMP) |
Histone H4 acetylation GO:0043967
The modification of histone H4 by the addition of an acetyl group.
|
1 | O94446 (/ISO) |
Histone H3-K4 acetylation GO:0043973
The modification of histone H3 by the addition of an acetyl group to a lysine residue at position 4 of the histone.
|
1 | O94446 (/IDA) |
Histone H4-K5 acetylation GO:0043981
The modification of histone H4 by the addition of an acetyl group to a lysine residue at position 5 of the histone.
|
1 | Q9H7Z6 (/IDA) |
Histone H4-K5 acetylation GO:0043981
The modification of histone H4 by the addition of an acetyl group to a lysine residue at position 5 of the histone.
|
1 | Q9D1P2 (/ISO) |
Histone H4-K8 acetylation GO:0043982
The modification of histone H4 by the addition of an acetyl group to a lysine residue at position 8 of the histone.
|
1 | Q9H7Z6 (/IDA) |
Histone H4-K8 acetylation GO:0043982
The modification of histone H4 by the addition of an acetyl group to a lysine residue at position 8 of the histone.
|
1 | Q9D1P2 (/ISO) |
Histone H4-K16 acetylation GO:0043984
The modification of histone H4 by the addition of an acetyl group to a lysine residue at position 16 of the histone.
|
1 | Q9H7Z6 (/IDA) |
Histone H4-K16 acetylation GO:0043984
The modification of histone H4 by the addition of an acetyl group to a lysine residue at position 16 of the histone.
|
1 | Q9D1P2 (/ISO) |
Negative regulation of transcription, DNA-templated GO:0045892
Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.
|
1 | Q9TYU5 (/IGI) |
Positive regulation of transcription, DNA-templated GO:0045893
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
|
1 | Q9H7Z6 (/IMP) |
Replication fork protection GO:0048478
Any process that prevents the collapse of stalled replication forks.
|
1 | O94446 (/IGI) |
Positive regulation of DNA-binding transcription factor activity GO:0051091
Any process that activates or increases the frequency, rate or extent of activity of a transcription factor, any factor involved in the initiation or regulation of transcription.
|
1 | O02193 (/IMP) |
Protein localization to chromatin GO:0071168
Any process in which a protein is transported to, or maintained at, a part of a chromosome that is organized into chromatin.
|
1 | Q9TYU5 (/IGI) |
Cellular response to ionizing radiation GO:0071479
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays.
|
1 | O02193 (/IMP) |
Regulation of secondary metabolite biosynthetic process GO:1900376
Any process that modulates the frequency, rate or extent of secondary metabolite biosynthetic process.
|
1 | C8VBH4 (/IMP) |
Regulation of photoperiodism, flowering GO:2000028
Any process that modulates the frequency, rate or extent of photoperiodism, flowering.
|
1 | Q9FLF7 (/IMP) |
Regulation of histone H4 acetylation involved in response to DNA damage stimulus GO:2000873
Any process that modulates the frequency, rate or extent of histone H4 acetylation involved in response to DNA damage stimulus.
|
1 | O02193 (/IMP) |
There are 46 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Swr1 complex GO:0000812
A multisubunit protein complex that is involved in chromatin remodeling. It is required for the incorporation of the histone variant H2AZ into chromatin. In S. cerevisiae, the complex contains Swr1p, a Swi2/Snf2-related ATPase, and 12 additional subunits.
|
56 |
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
(46 more) |
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
|
56 |
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
(46 more) |
Piccolo NuA4 histone acetyltransferase complex GO:0032777
A heterotrimeric H4/H2A histone acetyltransferase complex with a substrate preference of chromatin over free histones. It contains a subset of the proteins found in the larger NuA4 histone acetyltransferase complex; for example, the S. cerevisiae complex contains Esa1p, Yng2p, and Epl1p.
|
56 |
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
(46 more) |
NuA4 histone acetyltransferase complex GO:0035267
A complex having histone acetylase activity on chromatin, as well as ATPase, DNA helicase and structural DNA binding activities. The complex is thought to be involved in double-strand DNA break repair. Subunits of the human complex include HTATIP/TIP60, TRRAP, RUVBL1, BUVBL2, beta-actin and BAF53/ACTL6A. In yeast, the complex has 13 subunits, including the catalytic subunit Esa1 (homologous to human Tip60).
|
56 |
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
Q5RBG4 (/ISS)
(46 more) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
48 |
O02193 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
(38 more) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
47 |
A0A024R597 (/IDA)
A0A024R597 (/IDA)
A0A024R597 (/IDA)
A0A024R597 (/IDA)
A0A024R597 (/IDA)
A0A024R597 (/IDA)
A0A024R597 (/IDA)
A0A024R597 (/IDA)
A0A024R597 (/IDA)
A0A024R597 (/IDA)
(37 more) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
42 |
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
Q92993 (/TAS)
(32 more) |
Nuclear chromatin GO:0000790
The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome in the nucleus.
|
31 |
Q08649 (/IDA)
Q08649 (/IDA)
Q08649 (/IDA)
Q08649 (/IDA)
Q08649 (/IDA)
Q08649 (/IDA)
Q08649 (/IDA)
Q08649 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
(21 more) |
NuA4 histone acetyltransferase complex GO:0035267
A complex having histone acetylase activity on chromatin, as well as ATPase, DNA helicase and structural DNA binding activities. The complex is thought to be involved in double-strand DNA break repair. Subunits of the human complex include HTATIP/TIP60, TRRAP, RUVBL1, BUVBL2, beta-actin and BAF53/ACTL6A. In yeast, the complex has 13 subunits, including the catalytic subunit Esa1 (homologous to human Tip60).
|
29 |
O94446 (/IDA)
Q08649 (/IDA)
Q08649 (/IDA)
Q08649 (/IDA)
Q08649 (/IDA)
Q08649 (/IDA)
Q08649 (/IDA)
Q08649 (/IDA)
Q08649 (/IDA)
Q92993 (/IDA)
(19 more) |
Piccolo NuA4 histone acetyltransferase complex GO:0032777
A heterotrimeric H4/H2A histone acetyltransferase complex with a substrate preference of chromatin over free histones. It contains a subset of the proteins found in the larger NuA4 histone acetyltransferase complex; for example, the S. cerevisiae complex contains Esa1p, Yng2p, and Epl1p.
|
26 |
Q08649 (/IDA)
Q08649 (/IDA)
Q08649 (/IDA)
Q08649 (/IDA)
Q08649 (/IDA)
Q08649 (/IDA)
Q08649 (/IDA)
Q08649 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
(16 more) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
24 |
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
(14 more) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
24 |
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
(14 more) |
Transcription factor complex GO:0005667
A protein complex that is capable of associating with DNA by direct binding, or via other DNA-binding proteins or complexes, and regulating transcription.
|
24 |
O02193 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
Q8CHK4 (/IDA)
(14 more) |
Nuclear chromatin GO:0000790
The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome in the nucleus.
|
23 |
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
(13 more) |
Swr1 complex GO:0000812
A multisubunit protein complex that is involved in chromatin remodeling. It is required for the incorporation of the histone variant H2AZ into chromatin. In S. cerevisiae, the complex contains Swr1p, a Swi2/Snf2-related ATPase, and 12 additional subunits.
|
23 |
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
(13 more) |
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
|
23 |
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
(13 more) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
23 |
Q99MK2 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
(13 more) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
23 |
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
(13 more) |
Piccolo NuA4 histone acetyltransferase complex GO:0032777
A heterotrimeric H4/H2A histone acetyltransferase complex with a substrate preference of chromatin over free histones. It contains a subset of the proteins found in the larger NuA4 histone acetyltransferase complex; for example, the S. cerevisiae complex contains Esa1p, Yng2p, and Epl1p.
|
23 |
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
(13 more) |
Protein-containing complex GO:0032991
A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together.
|
23 |
Q99MK2 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
Q99MK2 (/IDA)
(13 more) |
Protein-containing complex GO:0032991
A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together.
|
23 |
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
(13 more) |
NuA4 histone acetyltransferase complex GO:0035267
A complex having histone acetylase activity on chromatin, as well as ATPase, DNA helicase and structural DNA binding activities. The complex is thought to be involved in double-strand DNA break repair. Subunits of the human complex include HTATIP/TIP60, TRRAP, RUVBL1, BUVBL2, beta-actin and BAF53/ACTL6A. In yeast, the complex has 13 subunits, including the catalytic subunit Esa1 (homologous to human Tip60).
|
23 |
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
Q8CHK4 (/ISO)
(13 more) |
Swr1 complex GO:0000812
A multisubunit protein complex that is involved in chromatin remodeling. It is required for the incorporation of the histone variant H2AZ into chromatin. In S. cerevisiae, the complex contains Swr1p, a Swi2/Snf2-related ATPase, and 12 additional subunits.
|
18 |
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
(8 more) |
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
|
18 |
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
Q92993 (/IDA)
(8 more) |
Polytene chromosome interband GO:0005705
A stretch of less tightly packed chromatin along the polytene chromosome, found between bands.
|
3 | O02193 (/IDA) Q960X4 (/IDA) Q960X4 (/IDA) |
Histone acetyltransferase complex GO:0000123
A protein complex that possesses histone acetyltransferase activity.
|
2 | Q960X4 (/IPI) Q960X4 (/IPI) |
Histone acetyltransferase complex GO:0000123
A protein complex that possesses histone acetyltransferase activity.
|
2 | Q5XI06 (/ISS) Q9D1P2 (/ISS) |
MLL1 complex GO:0071339
A protein complex that can methylate lysine-4 of histone H3. MLL1/MLL is the catalytic methyltransferase subunit, and the complex also contains the core components ASH2L, HCFC1/HCF1 WDR5 and RBBP5.
|
2 | Q5XI06 (/ISS) Q9D1P2 (/ISS) |
MSL complex GO:0072487
A histone acetyltransferase complex that catalyzes the acetylation of a histone H4 lysine residue at position 16. In human, it contains the catalytic subunit MOF, and MSL1, MSL2 and MSL3.
|
2 | O02193 (/IDA) Q9H7Z6 (/IDA) |
MSL complex GO:0072487
A histone acetyltransferase complex that catalyzes the acetylation of a histone H4 lysine residue at position 16. In human, it contains the catalytic subunit MOF, and MSL1, MSL2 and MSL3.
|
2 | Q5XI06 (/ISS) Q9D1P2 (/ISS) |
Histone acetyltransferase complex GO:0000123
A protein complex that possesses histone acetyltransferase activity.
|
1 | Q9H7Z6 (/IDA) |
Histone acetyltransferase complex GO:0000123
A protein complex that possesses histone acetyltransferase activity.
|
1 | Q9D1P2 (/ISO) |
Nuclear chromosome GO:0000228
A chromosome that encodes the nuclear genome and is found in the nucleus of a eukaryotic cell during the cell cycle phases when the nucleus is intact.
|
1 | O02193 (/IDA) |
Kinetochore GO:0000776
A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules.
|
1 | Q9D1P2 (/IDA) |
X chromosome GO:0000805
The sex chromosome present in both sexes of species in which the male is the heterogametic sex. Two copies of the X chromosome are present in each somatic cell of females and one copy is present in males.
|
1 | O02193 (/IDA) |
X chromosome GO:0000805
The sex chromosome present in both sexes of species in which the male is the heterogametic sex. Two copies of the X chromosome are present in each somatic cell of females and one copy is present in males.
|
1 | O02193 (/TAS) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
1 | O94446 (/HDA) |
Nuclear matrix GO:0016363
The dense fibrillar network lying on the inner side of the nuclear membrane.
|
1 | Q9D1P2 (/IDA) |
X chromosome located dosage compensation complex, transcription activating GO:0016456
An RNA-protein complex localized to the X chromosome of males where it is required for the hyper-transcriptional activation of the X chromosome. An example of this is found in Drosophila melanogaster.
|
1 | O02193 (/IDA) |
X chromosome located dosage compensation complex, transcription activating GO:0016456
An RNA-protein complex localized to the X chromosome of males where it is required for the hyper-transcriptional activation of the X chromosome. An example of this is found in Drosophila melanogaster.
|
1 | O02193 (/NAS) |
X chromosome located dosage compensation complex, transcription activating GO:0016456
An RNA-protein complex localized to the X chromosome of males where it is required for the hyper-transcriptional activation of the X chromosome. An example of this is found in Drosophila melanogaster.
|
1 | O02193 (/TAS) |
Nuclear pericentric heterochromatin GO:0031618
Nuclear heterochromatin that is located adjacent to the CENP-A rich centromere 'central core' and characterized by the modified histone H3K9me3.
|
1 | O94446 (/IDA) |
NSL complex GO:0044545
A histone acetyltransferase complex that catalyzes the acetylation of a histone H4 lysine residues at several positions. In human, it contains the catalytic subunit MOF, NSL1/KIAA1267, NSL2/KANSL2, NSL3/KANSL3, MCRS1, PHF20, OGT1, WDR5 and HCF1.
|
1 | O02193 (/IDA) |
MLL1 complex GO:0071339
A protein complex that can methylate lysine-4 of histone H3. MLL1/MLL is the catalytic methyltransferase subunit, and the complex also contains the core components ASH2L, HCFC1/HCF1 WDR5 and RBBP5.
|
1 | Q9H7Z6 (/IDA) |
MLL1 complex GO:0071339
A protein complex that can methylate lysine-4 of histone H3. MLL1/MLL is the catalytic methyltransferase subunit, and the complex also contains the core components ASH2L, HCFC1/HCF1 WDR5 and RBBP5.
|
1 | Q9D1P2 (/ISO) |
MSL complex GO:0072487
A histone acetyltransferase complex that catalyzes the acetylation of a histone H4 lysine residue at position 16. In human, it contains the catalytic subunit MOF, and MSL1, MSL2 and MSL3.
|
1 | Q9D1P2 (/ISO) |