The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:

"
P-loop containing nucleotide triphosphate hydrolases
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 498: Eukaryotic initiation factor 4A-III

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 19 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Selenocysteine insertion sequence binding GO:0035368
Interacting selectively and non-covalently with the selenocysteine insertion sequence (SECIS), a regulatory sequence within mRNA which directs incorporation of a selenocysteine at a stop codon (UGA) during translation.
32 Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA)
(22 more)
RNA stem-loop binding GO:0035613
Interacting selectively and non-covalently with a stem-loop in an RNA molecule. An RNA stem-loop is a secondary RNA structure consisting of a double-stranded RNA (dsRNA) stem and a terminal loop.
32 Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA)
(22 more)
Ribonucleoprotein complex binding GO:0043021
Interacting selectively and non-covalently with any complex of RNA and protein.
32 Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA)
(22 more)
Translation regulator activity GO:0045182
Any molecular function involved in the initiation, activation, perpetuation, repression or termination of polypeptide synthesis at the ribosome.
32 Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA)
(22 more)
Translation regulator activity GO:0045182
Any molecular function involved in the initiation, activation, perpetuation, repression or termination of polypeptide synthesis at the ribosome.
32 Q3B8Q2 (/IMP) Q3B8Q2 (/IMP) Q3B8Q2 (/IMP) Q3B8Q2 (/IMP) Q3B8Q2 (/IMP) Q3B8Q2 (/IMP) Q3B8Q2 (/IMP) Q3B8Q2 (/IMP) Q3B8Q2 (/IMP) Q3B8Q2 (/IMP)
(22 more)
MRNA binding GO:0003729
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
13 P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA)
(3 more)
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
13 P38919 (/IPI) P38919 (/IPI) P38919 (/IPI) P38919 (/IPI) P38919 (/IPI) P38919 (/IPI) P38919 (/IPI) P38919 (/IPI) P38919 (/IPI) P38919 (/IPI)
(3 more)
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
12 P38919 (/HDA) P38919 (/HDA) P38919 (/HDA) P38919 (/HDA) P38919 (/HDA) P38919 (/HDA) P38919 (/HDA) P38919 (/HDA) P38919 (/HDA) P38919 (/HDA)
(2 more)
RNA helicase activity GO:0003724
Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction drives the unwinding of an RNA helix.
12 P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA)
(2 more)
ATP binding GO:0005524
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
12 P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA)
(2 more)
Poly(A) binding GO:0008143
Interacting selectively and non-covalently with a sequence of adenylyl residues in an RNA molecule, such as the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA.
12 P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA)
(2 more)
RNA helicase activity GO:0003724
Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction drives the unwinding of an RNA helix.
2 Q10055 (/ISO) Q91VC3 (/ISO)
MRNA binding GO:0003729
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
1 Q91VC3 (/ISO)
ATP binding GO:0005524
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
1 Q91VC3 (/ISO)
Poly(A) binding GO:0008143
Interacting selectively and non-covalently with a sequence of adenylyl residues in an RNA molecule, such as the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA.
1 Q91VC3 (/ISO)
Selenocysteine insertion sequence binding GO:0035368
Interacting selectively and non-covalently with the selenocysteine insertion sequence (SECIS), a regulatory sequence within mRNA which directs incorporation of a selenocysteine at a stop codon (UGA) during translation.
1 Q91VC3 (/ISO)
RNA stem-loop binding GO:0035613
Interacting selectively and non-covalently with a stem-loop in an RNA molecule. An RNA stem-loop is a secondary RNA structure consisting of a double-stranded RNA (dsRNA) stem and a terminal loop.
1 Q91VC3 (/ISO)
Ribonucleoprotein complex binding GO:0043021
Interacting selectively and non-covalently with any complex of RNA and protein.
1 Q91VC3 (/ISO)
Translation regulator activity GO:0045182
Any molecular function involved in the initiation, activation, perpetuation, repression or termination of polypeptide synthesis at the ribosome.
1 Q91VC3 (/ISO)

There are 46 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Regulation of alternative mRNA splicing, via spliceosome GO:0000381
Any process that modulates the frequency, rate or extent of alternative splicing of nuclear mRNAs.
108 A6M931 (/ISS) A6M931 (/ISS) A6M931 (/ISS) A6M931 (/ISS) A6M931 (/ISS) A6M931 (/ISS) A6M931 (/ISS) A6M931 (/ISS) A6M931 (/ISS) A6M931 (/ISS)
(98 more)
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
106 A6M931 (/ISS) A6M931 (/ISS) A6M931 (/ISS) A6M931 (/ISS) A6M931 (/ISS) A6M931 (/ISS) A6M931 (/ISS) A6M931 (/ISS) A6M931 (/ISS) A6M931 (/ISS)
(96 more)
Embryonic cranial skeleton morphogenesis GO:0048701
The process in which the anatomical structures of the cranial skeleton are generated and organized during the embryonic phase.
98 A6M931 (/ISS) A6M931 (/ISS) A6M931 (/ISS) A6M931 (/ISS) A6M931 (/ISS) A6M931 (/ISS) A6M931 (/ISS) A6M931 (/ISS) A6M931 (/ISS) A6M931 (/ISS)
(88 more)
Associative learning GO:0008306
Learning by associating a stimulus (the cause) with a particular outcome (the effect).
32 Q3B8Q2 (/IEP) Q3B8Q2 (/IEP) Q3B8Q2 (/IEP) Q3B8Q2 (/IEP) Q3B8Q2 (/IEP) Q3B8Q2 (/IEP) Q3B8Q2 (/IEP) Q3B8Q2 (/IEP) Q3B8Q2 (/IEP) Q3B8Q2 (/IEP)
(22 more)
Negative regulation of gene expression GO:0010629
Any process that decreases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
32 Q3B8Q2 (/IMP) Q3B8Q2 (/IMP) Q3B8Q2 (/IMP) Q3B8Q2 (/IMP) Q3B8Q2 (/IMP) Q3B8Q2 (/IMP) Q3B8Q2 (/IMP) Q3B8Q2 (/IMP) Q3B8Q2 (/IMP) Q3B8Q2 (/IMP)
(22 more)
Response to organic cyclic compound GO:0014070
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic cyclic compound stimulus.
32 Q3B8Q2 (/IEP) Q3B8Q2 (/IEP) Q3B8Q2 (/IEP) Q3B8Q2 (/IEP) Q3B8Q2 (/IEP) Q3B8Q2 (/IEP) Q3B8Q2 (/IEP) Q3B8Q2 (/IEP) Q3B8Q2 (/IEP) Q3B8Q2 (/IEP)
(22 more)
Exploration behavior GO:0035640
The specific behavior of an organism in response to a novel environment or stimulus.
32 Q3B8Q2 (/IEP) Q3B8Q2 (/IEP) Q3B8Q2 (/IEP) Q3B8Q2 (/IEP) Q3B8Q2 (/IEP) Q3B8Q2 (/IEP) Q3B8Q2 (/IEP) Q3B8Q2 (/IEP) Q3B8Q2 (/IEP) Q3B8Q2 (/IEP)
(22 more)
Cellular response to selenite ion GO:0072715
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a selenite ion stimulus.
32 Q3B8Q2 (/IEP) Q3B8Q2 (/IEP) Q3B8Q2 (/IEP) Q3B8Q2 (/IEP) Q3B8Q2 (/IEP) Q3B8Q2 (/IEP) Q3B8Q2 (/IEP) Q3B8Q2 (/IEP) Q3B8Q2 (/IEP) Q3B8Q2 (/IEP)
(22 more)
Negative regulation of excitatory postsynaptic potential GO:0090394
Any process that prevents the establishment or decreases the extent of the excitatory postsynaptic potential (EPSP) which is a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential.
32 Q3B8Q2 (/IMP) Q3B8Q2 (/IMP) Q3B8Q2 (/IMP) Q3B8Q2 (/IMP) Q3B8Q2 (/IMP) Q3B8Q2 (/IMP) Q3B8Q2 (/IMP) Q3B8Q2 (/IMP) Q3B8Q2 (/IMP) Q3B8Q2 (/IMP)
(22 more)
Regulation of translation at postsynapse, modulating synaptic transmission GO:0099578
Any process that modulates synaptic transmission by regulating translation occurring at the postsynapse.
32 Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA)
(22 more)
Regulation of translation at postsynapse, modulating synaptic transmission GO:0099578
Any process that modulates synaptic transmission by regulating translation occurring at the postsynapse.
32 Q3B8Q2 (/IMP) Q3B8Q2 (/IMP) Q3B8Q2 (/IMP) Q3B8Q2 (/IMP) Q3B8Q2 (/IMP) Q3B8Q2 (/IMP) Q3B8Q2 (/IMP) Q3B8Q2 (/IMP) Q3B8Q2 (/IMP) Q3B8Q2 (/IMP)
(22 more)
Regulation of mRNA binding GO:1902415
Any process that modulates the frequency, rate or extent of mRNA binding.
32 Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA)
(22 more)
Negative regulation of selenocysteine incorporation GO:1904570
Any process that stops, prevents or reduces the frequency, rate or extent of selenocysteine incorporation.
32 Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA)
(22 more)
Negative regulation of selenocysteine insertion sequence binding GO:1904574
Any process that stops, prevents or reduces the frequency, rate or extent of selenocysteine insertion sequence binding.
32 Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA)
(22 more)
Cellular response to brain-derived neurotrophic factor stimulus GO:1990416
A process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a brain-derived neurotrophic factor stimulus.
32 Q3B8Q2 (/IEP) Q3B8Q2 (/IEP) Q3B8Q2 (/IEP) Q3B8Q2 (/IEP) Q3B8Q2 (/IEP) Q3B8Q2 (/IEP) Q3B8Q2 (/IEP) Q3B8Q2 (/IEP) Q3B8Q2 (/IEP) Q3B8Q2 (/IEP)
(22 more)
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
13 P38919 (/IC) P38919 (/IC) P38919 (/IC) P38919 (/IC) P38919 (/IC) P38919 (/IC) P38919 (/IC) P38919 (/IC) P38919 (/IC) P38919 (/IC)
(3 more)
Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0000184
The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins.
12 P38919 (/IMP) P38919 (/IMP) P38919 (/IMP) P38919 (/IMP) P38919 (/IMP) P38919 (/IMP) P38919 (/IMP) P38919 (/IMP) P38919 (/IMP) P38919 (/IMP)
(2 more)
Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0000184
The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins.
12 P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS)
(2 more)
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
12 P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA)
(2 more)
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
12 P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS)
(2 more)
RNA export from nucleus GO:0006405
The directed movement of RNA from the nucleus to the cytoplasm.
12 P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS)
(2 more)
MRNA export from nucleus GO:0006406
The directed movement of mRNA from the nucleus to the cytoplasm.
12 P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS)
(2 more)
Negative regulation of translation GO:0017148
Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA.
12 P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA)
(2 more)
MRNA 3'-end processing GO:0031124
Any process involved in forming the mature 3' end of an mRNA molecule.
12 P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS)
(2 more)
Positive regulation of translation GO:0045727
Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA.
12 P38919 (/IMP) P38919 (/IMP) P38919 (/IMP) P38919 (/IMP) P38919 (/IMP) P38919 (/IMP) P38919 (/IMP) P38919 (/IMP) P38919 (/IMP) P38919 (/IMP)
(2 more)
Embryonic cranial skeleton morphogenesis GO:0048701
The process in which the anatomical structures of the cranial skeleton are generated and organized during the embryonic phase.
12 P38919 (/IMP) P38919 (/IMP) P38919 (/IMP) P38919 (/IMP) P38919 (/IMP) P38919 (/IMP) P38919 (/IMP) P38919 (/IMP) P38919 (/IMP) P38919 (/IMP)
(2 more)
Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0000184
The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins.
1 Q91VC3 (/ISO)
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
1 Q91VC3 (/ISO)
Response to hypoxia GO:0001666
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level.
1 Q94A52 (/IDA)
Chromatin organization GO:0006325
Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin.
1 Q9VHS8 (/IMP)
RRNA processing GO:0006364
Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules.
1 Q10055 (/ISO)
RNA splicing GO:0008380
The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA.
1 Q9VHS8 (/IMP)
Positive regulation of gene expression GO:0010628
Any process that increases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
1 Q9VHS8 (/IMP)
Negative regulation of gene expression GO:0010629
Any process that decreases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
1 Q91VC3 (/ISO)
Negative regulation of translation GO:0017148
Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA.
1 Q91VC3 (/ISO)
Pole plasm oskar mRNA localization GO:0045451
Any process in which oskar mRNA is transported to, or maintained in, the oocyte pole plasm.
1 Q9VHS8 (/IGI)
Positive regulation of translation GO:0045727
Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA.
1 Q91VC3 (/ISO)
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
1 Q91VC3 (/IDA)
Positive regulation of mRNA splicing, via spliceosome GO:0048026
Any process that activates or increases the rate or extent of mRNA splicing via a spliceosomal mechanism.
1 Q91VC3 (/IMP)
Embryonic cranial skeleton morphogenesis GO:0048701
The process in which the anatomical structures of the cranial skeleton are generated and organized during the embryonic phase.
1 Q91VC3 (/ISO)
Negative regulation of excitatory postsynaptic potential GO:0090394
Any process that prevents the establishment or decreases the extent of the excitatory postsynaptic potential (EPSP) which is a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential.
1 Q91VC3 (/ISO)
Regulation of translation at postsynapse, modulating synaptic transmission GO:0099578
Any process that modulates synaptic transmission by regulating translation occurring at the postsynapse.
1 Q91VC3 (/ISO)
Regulation of mRNA binding GO:1902415
Any process that modulates the frequency, rate or extent of mRNA binding.
1 Q91VC3 (/ISO)
Exon-exon junction complex assembly GO:1903040
The aggregation, arrangement and bonding together of a set of components to form an exon-exon junction complex.
1 Q9VHS8 (/IMP)
Negative regulation of selenocysteine incorporation GO:1904570
Any process that stops, prevents or reduces the frequency, rate or extent of selenocysteine incorporation.
1 Q91VC3 (/ISO)
Negative regulation of selenocysteine insertion sequence binding GO:1904574
Any process that stops, prevents or reduces the frequency, rate or extent of selenocysteine insertion sequence binding.
1 Q91VC3 (/ISO)

There are 37 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
U2-type catalytic step 1 spliceosome GO:0071006
A spliceosomal complex that is formed by the displacement of the U1 and U4 snRNPs from the precatalytic spliceosome; the U2, U5 and U6 snRNPs remain associated with the mRNA. This complex, sometimes called the activated spliceosome, is the catalytically active form of the spliceosome, and includes many proteins in addition to those found in the U2, and U5 and U6 snRNPs.
106 A6M931 (/ISS) A6M931 (/ISS) A6M931 (/ISS) A6M931 (/ISS) A6M931 (/ISS) A6M931 (/ISS) A6M931 (/ISS) A6M931 (/ISS) A6M931 (/ISS) A6M931 (/ISS)
(96 more)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
73 A6M931 (/ISS) A6M931 (/ISS) A6M931 (/ISS) A6M931 (/ISS) A6M931 (/ISS) A6M931 (/ISS) A6M931 (/ISS) A6M931 (/ISS) A6M931 (/ISS) A6M931 (/ISS)
(63 more)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
47 P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA)
(37 more)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
44 P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA)
(34 more)
Dendrite GO:0030425
A neuron projection that has a short, tapering, morphology. Dendrites receive and integrate signals from other neurons or from sensory stimuli, and conduct nerve impulses towards the axon or the cell body. In most neurons, the impulse is conveyed from dendrites to axon via the cell body, but in some types of unipolar neuron, the impulse does not travel via the cell body.
32 Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA)
(22 more)
Neuronal cell body GO:0043025
The portion of a neuron that includes the nucleus, but excludes cell projections such as axons and dendrites.
32 Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA)
(22 more)
Glutamatergic synapse GO:0098978
A synapse that uses glutamate as a neurotransmitter.
32 Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA)
(22 more)
Glutamatergic synapse GO:0098978
A synapse that uses glutamate as a neurotransmitter.
32 Q3B8Q2 (/IMP) Q3B8Q2 (/IMP) Q3B8Q2 (/IMP) Q3B8Q2 (/IMP) Q3B8Q2 (/IMP) Q3B8Q2 (/IMP) Q3B8Q2 (/IMP) Q3B8Q2 (/IMP) Q3B8Q2 (/IMP) Q3B8Q2 (/IMP)
(22 more)
Postsynaptic cytosol GO:0099524
The region of the cytosol consisting of all cytosol that is part of the postsynapse.
32 Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA)
(22 more)
Ribonucleoprotein complex GO:1990904
A macromolecular complex containing both protein and RNA molecules.
32 Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA) Q3B8Q2 (/IDA)
(22 more)
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
25 A0A024R8W0 (/IDA) A0A024R8W0 (/IDA) A0A024R8W0 (/IDA) A0A024R8W0 (/IDA) A0A024R8W0 (/IDA) A0A024R8W0 (/IDA) A0A024R8W0 (/IDA) A0A024R8W0 (/IDA) A0A024R8W0 (/IDA) A0A024R8W0 (/IDA)
(15 more)
Exon-exon junction complex GO:0035145
A multi-subunit complex deposited by the spliceosome upstream of messenger RNA exon-exon junctions. The exon-exon junction complex provides a binding platform for factors involved in mRNA export and nonsense-mediated mRNA decay.
13 P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA)
(3 more)
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
12 P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS)
(2 more)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
12 P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS) P38919 (/TAS)
(2 more)
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
12 P38919 (/HDA) P38919 (/HDA) P38919 (/HDA) P38919 (/HDA) P38919 (/HDA) P38919 (/HDA) P38919 (/HDA) P38919 (/HDA) P38919 (/HDA) P38919 (/HDA)
(2 more)
U2-type catalytic step 1 spliceosome GO:0071006
A spliceosomal complex that is formed by the displacement of the U1 and U4 snRNPs from the precatalytic spliceosome; the U2, U5 and U6 snRNPs remain associated with the mRNA. This complex, sometimes called the activated spliceosome, is the catalytically active form of the spliceosome, and includes many proteins in addition to those found in the U2, and U5 and U6 snRNPs.
12 P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA)
(2 more)
Catalytic step 2 spliceosome GO:0071013
A spliceosomal complex that contains three snRNPs, including U5, bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the associated snRNPs.
12 P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA) P38919 (/IDA)
(2 more)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
1 Q10055 (/HDA)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
1 Q91VC3 (/ISO)
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
1 Q91VC3 (/ISO)
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
1 Q94A52 (/IDA)
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
1 Q10055 (/ISO)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
1 Q91VC3 (/ISO)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
1 Q10055 (/HDA)
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
1 Q94A52 (/IDA)
Nuclear speck GO:0016607
A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy.
1 Q94A52 (/IDA)
Dendrite GO:0030425
A neuron projection that has a short, tapering, morphology. Dendrites receive and integrate signals from other neurons or from sensory stimuli, and conduct nerve impulses towards the axon or the cell body. In most neurons, the impulse is conveyed from dendrites to axon via the cell body, but in some types of unipolar neuron, the impulse does not travel via the cell body.
1 Q91VC3 (/ISO)
Exon-exon junction complex GO:0035145
A multi-subunit complex deposited by the spliceosome upstream of messenger RNA exon-exon junctions. The exon-exon junction complex provides a binding platform for factors involved in mRNA export and nonsense-mediated mRNA decay.
1 Q91VC3 (/ISO)
Neuronal cell body GO:0043025
The portion of a neuron that includes the nucleus, but excludes cell projections such as axons and dendrites.
1 Q91VC3 (/ISO)
Pole plasm GO:0045495
Differentiated cytoplasm associated with a pole (animal, vegetal, anterior, or posterior) of an oocyte, egg or early embryo.
1 Q9VHS8 (/IDA)
U2-type catalytic step 1 spliceosome GO:0071006
A spliceosomal complex that is formed by the displacement of the U1 and U4 snRNPs from the precatalytic spliceosome; the U2, U5 and U6 snRNPs remain associated with the mRNA. This complex, sometimes called the activated spliceosome, is the catalytically active form of the spliceosome, and includes many proteins in addition to those found in the U2, and U5 and U6 snRNPs.
1 Q91VC3 (/ISO)
Precatalytic spliceosome GO:0071011
A spliceosomal complex that is formed by the recruitment of a preassembled U5-containing tri-snRNP to the prespliceosome. Although all 5 snRNPs are present, the precatalytic spliceosome is catalytically inactive. The precatalytic spliceosome includes many proteins in addition to those found in the associated snRNPs.
1 Q9VHS8 (/HDA)
Catalytic step 2 spliceosome GO:0071013
A spliceosomal complex that contains three snRNPs, including U5, bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the associated snRNPs.
1 Q9VHS8 (/HDA)
Catalytic step 2 spliceosome GO:0071013
A spliceosomal complex that contains three snRNPs, including U5, bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the associated snRNPs.
1 Q91VC3 (/ISO)
Glutamatergic synapse GO:0098978
A synapse that uses glutamate as a neurotransmitter.
1 Q91VC3 (/ISO)
Postsynaptic cytosol GO:0099524
The region of the cytosol consisting of all cytosol that is part of the postsynapse.
1 Q91VC3 (/ISO)
Ribonucleoprotein complex GO:1990904
A macromolecular complex containing both protein and RNA molecules.
1 Q91VC3 (/ISO)
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