The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:

"
P-loop containing nucleotide triphosphate hydrolases
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 464: GTP-binding protein ypt5

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 5 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
GTPase activity GO:0003924
Catalysis of the reaction: GTP + H2O = GDP + phosphate.
10 P36018 (/IDA) P36018 (/IDA) P36018 (/IDA) P36018 (/IDA) P36018 (/IDA) P36018 (/IDA) P36018 (/IDA) P36018 (/IDA) P36018 (/IDA) P36018 (/IDA)
GTPase activity GO:0003924
Catalysis of the reaction: GTP + H2O = GDP + phosphate.
10 P36018 (/IMP) P36018 (/IMP) P36018 (/IMP) P36018 (/IMP) P36018 (/IMP) P36018 (/IMP) P36018 (/IMP) P36018 (/IMP) P36018 (/IMP) P36018 (/IMP)
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
10 P36018 (/IPI) P36018 (/IPI) P36018 (/IPI) P36018 (/IPI) P36018 (/IPI) P36018 (/IPI) P36018 (/IPI) P36018 (/IPI) P36018 (/IPI) P36018 (/IPI)
GTP binding GO:0005525
Interacting selectively and non-covalently with GTP, guanosine triphosphate.
3 P36586 (/IDA) Q5B6I8 (/IDA) Q5B6I8 (/IDA)
GTPase activity GO:0003924
Catalysis of the reaction: GTP + H2O = GDP + phosphate.
1 P36586 (/ISO)

There are 13 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Protein targeting to vacuole GO:0006623
The process of directing proteins towards the vacuole, usually using signals contained within the protein.
15 A0A1D8PFT9 (/IMP) A0A1D8PFT9 (/IMP) A0A1D8PFT9 (/IMP) P36018 (/IMP) P36018 (/IMP) P36018 (/IMP) P36018 (/IMP) P36018 (/IMP) P36018 (/IMP) P36018 (/IMP)
(5 more)
Endocytosis GO:0006897
A vesicle-mediated transport process in which cells take up external materials or membrane constituents by the invagination of a small region of the plasma membrane to form a new membrane-bounded vesicle.
12 P36018 (/IMP) P36018 (/IMP) P36018 (/IMP) P36018 (/IMP) P36018 (/IMP) P36018 (/IMP) P36018 (/IMP) P36018 (/IMP) P36018 (/IMP) P36018 (/IMP)
(2 more)
Golgi to endosome transport GO:0006895
The directed movement of substances from the Golgi to early sorting endosomes. Clathrin vesicles transport substances from the trans-Golgi to endosomes.
10 P36018 (/IGI) P36018 (/IGI) P36018 (/IGI) P36018 (/IGI) P36018 (/IGI) P36018 (/IGI) P36018 (/IGI) P36018 (/IGI) P36018 (/IGI) P36018 (/IGI)
Golgi to endosome transport GO:0006895
The directed movement of substances from the Golgi to early sorting endosomes. Clathrin vesicles transport substances from the trans-Golgi to endosomes.
10 P36018 (/IMP) P36018 (/IMP) P36018 (/IMP) P36018 (/IMP) P36018 (/IMP) P36018 (/IMP) P36018 (/IMP) P36018 (/IMP) P36018 (/IMP) P36018 (/IMP)
Late endosome to vacuole transport via multivesicular body sorting pathway GO:0032511
The directed movement of substances from endosomes to vacuoles by a pathway in which molecules are sorted into multivesicular bodies, which then fuse with the vacuole.
10 P36018 (/IGI) P36018 (/IGI) P36018 (/IGI) P36018 (/IGI) P36018 (/IGI) P36018 (/IGI) P36018 (/IGI) P36018 (/IGI) P36018 (/IGI) P36018 (/IGI)
Protein localization to endosome GO:0036010
A process in which a protein is transported to, or maintained in, a location within an endosome.
10 P36018 (/IGI) P36018 (/IGI) P36018 (/IGI) P36018 (/IGI) P36018 (/IGI) P36018 (/IGI) P36018 (/IGI) P36018 (/IGI) P36018 (/IGI) P36018 (/IGI)
Multivesicular body assembly GO:0036258
The aggregation, arrangement and bonding together of a set of components to form a multivesicular body, a type of late endosome in which regions of the limiting endosomal membrane invaginate to form internal vesicles; membrane proteins that enter the internal vesicles are sequestered from the cytoplasm.
10 P36018 (/IGI) P36018 (/IGI) P36018 (/IGI) P36018 (/IGI) P36018 (/IGI) P36018 (/IGI) P36018 (/IGI) P36018 (/IGI) P36018 (/IGI) P36018 (/IGI)
Small GTPase mediated signal transduction GO:0007264
Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals.
2 Q5B6I8 (/IMP) Q5B6I8 (/IMP)
Regulation of vacuole organization GO:0044088
Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of a vacuole.
2 Q5B6I8 (/IMP) Q5B6I8 (/IMP)
Endocytosis GO:0006897
A vesicle-mediated transport process in which cells take up external materials or membrane constituents by the invagination of a small region of the plasma membrane to form a new membrane-bounded vesicle.
1 P36586 (/ISO)
Small GTPase mediated signal transduction GO:0007264
Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals.
1 P36586 (/IC)
Regulation of intracellular protein transport GO:0033157
Any process that modulates the frequency, rate or extent of the directed movement of proteins within cells.
1 P36586 (/IC)
Endosomal vesicle fusion GO:0034058
The homotypic fusion of endocytic vesicles to form or add to an early endosome.
1 P36586 (/IMP)

There are 8 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Fungal-type vacuole membrane GO:0000329
The lipid bilayer surrounding a vacuole, the shape of which correlates with cell cycle phase. The membrane separates its contents from the cytoplasm of the cell. An example of this structure is found in Saccharomyces cerevisiae.
10 P36018 (/HDA) P36018 (/HDA) P36018 (/HDA) P36018 (/HDA) P36018 (/HDA) P36018 (/HDA) P36018 (/HDA) P36018 (/HDA) P36018 (/HDA) P36018 (/HDA)
Late endosome GO:0005770
A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center.
10 P36018 (/IMP) P36018 (/IMP) P36018 (/IMP) P36018 (/IMP) P36018 (/IMP) P36018 (/IMP) P36018 (/IMP) P36018 (/IMP) P36018 (/IMP) P36018 (/IMP)
Late endosome GO:0005770
A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center.
5 A0A1D8PFT9 (/IDA) A0A1D8PFT9 (/IDA) A0A1D8PFT9 (/IDA) Q5B6I8 (/IDA) Q5B6I8 (/IDA)
Early endosome GO:0005769
A membrane-bounded organelle that receives incoming material from primary endocytic vesicles that have been generated by clathrin-dependent and clathrin-independent endocytosis; vesicles fuse with the early endosome to deliver cargo for sorting into recycling or degradation pathways.
2 Q5B6I8 (/IDA) Q5B6I8 (/IDA)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
1 P36586 (/HDA)
Late endosome GO:0005770
A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center.
1 P36586 (/ISO)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
1 P36586 (/HDA)
Early endosome membrane GO:0031901
The lipid bilayer surrounding an early endosome.
1 P36586 (/IDA)
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