The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"P-loop containing nucleotide triphosphate hydrolases
".
FunFam 402: Ras-related protein Rab-27A
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 13 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
GTPase activity GO:0003924
Catalysis of the reaction: GTP + H2O = GDP + phosphate.
|
12 |
G5EBS5 (/ISS)
O00194 (/ISS)
O00194 (/ISS)
P23640 (/ISS)
P51159 (/ISS)
P51159 (/ISS)
Q1HE58 (/ISS)
Q4LE85 (/ISS)
Q4LE85 (/ISS)
Q8HZJ5 (/ISS)
(2 more) |
GTP binding GO:0005525
Interacting selectively and non-covalently with GTP, guanosine triphosphate.
|
11 |
O00194 (/ISS)
O00194 (/ISS)
P23640 (/ISS)
P51159 (/ISS)
P51159 (/ISS)
Q1HE58 (/ISS)
Q4LE85 (/ISS)
Q4LE85 (/ISS)
Q8HZJ5 (/ISS)
Q8HZJ5 (/ISS)
(1 more) |
GDP binding GO:0019003
Interacting selectively and non-covalently with GDP, guanosine 5'-diphosphate.
|
11 |
P23640 (/ISS)
Q1HE58 (/ISS)
Q4LE85 (/ISS)
Q4LE85 (/ISS)
Q8HZJ5 (/ISS)
Q8HZJ5 (/ISS)
Q99P58 (/ISS)
Q99P58 (/ISS)
Q99P74 (/ISS)
Q9ERI2 (/ISS)
(1 more) |
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
10 | O00194 (/IPI) O00194 (/IPI) P23640 (/IPI) P51159 (/IPI) P51159 (/IPI) Q99P58 (/IPI) Q99P58 (/IPI) Q99P74 (/IPI) Q9ERI2 (/IPI) Q9ERI2 (/IPI) |
GTP binding GO:0005525
Interacting selectively and non-covalently with GTP, guanosine triphosphate.
|
8 | O00194 (/IDA) O00194 (/IDA) P51159 (/IDA) P51159 (/IDA) Q99P58 (/IDA) Q99P58 (/IDA) Q9ERI2 (/IDA) Q9ERI2 (/IDA) |
GTPase activity GO:0003924
Catalysis of the reaction: GTP + H2O = GDP + phosphate.
|
4 | Q99P58 (/IDA) Q99P58 (/IDA) Q9ERI2 (/IDA) Q9ERI2 (/IDA) |
GTP binding GO:0005525
Interacting selectively and non-covalently with GTP, guanosine triphosphate.
|
4 | Q99P58 (/ISO) Q99P58 (/ISO) Q9ERI2 (/ISO) Q9ERI2 (/ISO) |
GDP binding GO:0019003
Interacting selectively and non-covalently with GDP, guanosine 5'-diphosphate.
|
4 | O00194 (/IDA) O00194 (/IDA) P51159 (/IDA) P51159 (/IDA) |
GDP binding GO:0019003
Interacting selectively and non-covalently with GDP, guanosine 5'-diphosphate.
|
4 | Q99P58 (/ISO) Q99P58 (/ISO) Q9ERI2 (/ISO) Q9ERI2 (/ISO) |
Protein domain specific binding GO:0019904
Interacting selectively and non-covalently with a specific domain of a protein.
|
4 | Q99P58 (/ISO) Q99P58 (/ISO) Q9ERI2 (/ISO) Q9ERI2 (/ISO) |
Myosin V binding GO:0031489
Interacting selectively and non-covalently with a class V myosin; myosin V is a dimeric molecule involved in intracellular transport.
|
4 | O00194 (/IPI) O00194 (/IPI) Q9ERI2 (/IPI) Q9ERI2 (/IPI) |
Protein domain specific binding GO:0019904
Interacting selectively and non-covalently with a specific domain of a protein.
|
3 | O00194 (/IPI) O00194 (/IPI) P23640 (/IPI) |
Myosin V binding GO:0031489
Interacting selectively and non-covalently with a class V myosin; myosin V is a dimeric molecule involved in intracellular transport.
|
2 | Q99P58 (/ISO) Q99P58 (/ISO) |
There are 54 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Anterograde axonal protein transport GO:0099641
The directed movement of proteins along microtubules from the cell body toward the cell periphery in nerve cell axons.
|
6 | O00194 (/ISS) O00194 (/ISS) Q8HZJ5 (/ISS) Q8HZJ5 (/ISS) Q99P58 (/ISS) Q99P58 (/ISS) |
Melanosome localization GO:0032400
Any process in which a melanosome is transported to, and/or maintained in, a specific location within the cell.
|
4 | P51159 (/IMP) P51159 (/IMP) Q9ERI2 (/IMP) Q9ERI2 (/IMP) |
Positive regulation of exocytosis GO:0045921
Any process that activates or increases the frequency, rate or extent of exocytosis.
|
4 | O00194 (/IMP) O00194 (/IMP) P51159 (/IMP) P51159 (/IMP) |
Positive regulation of exocytosis GO:0045921
Any process that activates or increases the frequency, rate or extent of exocytosis.
|
4 | Q99P58 (/ISO) Q99P58 (/ISO) Q9ERI2 (/ISO) Q9ERI2 (/ISO) |
Multivesicular body sorting pathway GO:0071985
A vesicle-mediated transport process in which transmembrane proteins are ubiquitylated to facilitate their entry into luminal vesicles of multivesicular bodies (MVBs); upon subsequent fusion of MVBs with lysosomes or vacuoles, the cargo proteins are degraded.
|
4 | O00194 (/IMP) O00194 (/IMP) P51159 (/IMP) P51159 (/IMP) |
Multivesicular body sorting pathway GO:0071985
A vesicle-mediated transport process in which transmembrane proteins are ubiquitylated to facilitate their entry into luminal vesicles of multivesicular bodies (MVBs); upon subsequent fusion of MVBs with lysosomes or vacuoles, the cargo proteins are degraded.
|
4 | Q99P58 (/ISO) Q99P58 (/ISO) Q9ERI2 (/ISO) Q9ERI2 (/ISO) |
Platelet degranulation GO:0002576
The regulated exocytosis of secretory granules containing preformed mediators such as histamine and serotonin by a platelet.
|
2 | O00194 (/TAS) O00194 (/TAS) |
Protein targeting GO:0006605
The process of targeting specific proteins to particular regions of the cell, typically membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif.
|
2 | Q9ERI2 (/IMP) Q9ERI2 (/IMP) |
Exocytosis GO:0006887
A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle. Exocytosis can occur either by full fusion, when the vesicle collapses into the plasma membrane, or by a kiss-and-run mechanism that involves the formation of a transient contact, a pore, between a granule (for exemple of chromaffin cells) and the plasma membrane. The latter process most of the time leads to only partial secretion of the granule content. Exocytosis begins with steps that prepare vesicles for fusion with the membrane (tethering and docking) and ends when molecules are secreted from the cell.
|
2 | P51159 (/IDA) P51159 (/IDA) |
Exocytosis GO:0006887
A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle. Exocytosis can occur either by full fusion, when the vesicle collapses into the plasma membrane, or by a kiss-and-run mechanism that involves the formation of a transient contact, a pore, between a granule (for exemple of chromaffin cells) and the plasma membrane. The latter process most of the time leads to only partial secretion of the granule content. Exocytosis begins with steps that prepare vesicles for fusion with the membrane (tethering and docking) and ends when molecules are secreted from the cell.
|
2 | Q9ERI2 (/ISO) Q9ERI2 (/ISO) |
Blood coagulation GO:0007596
The sequential process in which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers.
|
2 | Q9ERI2 (/IMP) Q9ERI2 (/IMP) |
Positive regulation of gene expression GO:0010628
Any process that increases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
|
2 | P51159 (/IMP) P51159 (/IMP) |
Positive regulation of gene expression GO:0010628
Any process that increases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
|
2 | Q9ERI2 (/ISO) Q9ERI2 (/ISO) |
Vesicle-mediated transport GO:0016192
A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane.
|
2 | Q9ERI2 (/IMP) Q9ERI2 (/IMP) |
Regulation of exocytosis GO:0017157
Any process that modulates the frequency, rate or extent of exocytosis.
|
2 | Q99P58 (/ISO) Q99P58 (/ISO) |
Antigen processing and presentation GO:0019882
The process in which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex.
|
2 | P51159 (/IMP) P51159 (/IMP) |
Antigen processing and presentation GO:0019882
The process in which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex.
|
2 | Q9ERI2 (/ISO) Q9ERI2 (/ISO) |
Melanocyte differentiation GO:0030318
The process in which a relatively unspecialized cell acquires specialized features of a melanocyte.
|
2 | Q9ERI2 (/IMP) Q9ERI2 (/IMP) |
Melanosome localization GO:0032400
Any process in which a melanosome is transported to, and/or maintained in, a specific location within the cell.
|
2 | Q9ERI2 (/ISO) Q9ERI2 (/ISO) |
Melanosome transport GO:0032402
The directed movement of melanosomes into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
|
2 | Q9ERI2 (/IMP) Q9ERI2 (/IMP) |
Melanosome transport GO:0032402
The directed movement of melanosomes into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
|
2 | P51159 (/NAS) P51159 (/NAS) |
Multivesicular body organization GO:0036257
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a multivesicular body. A multivesicular body is a type of late endosome in which regions of the limiting endosomal membrane invaginate to form internal vesicles; membrane proteins that enter the internal vesicles are sequestered from the cytoplasm.
|
2 | P51159 (/IMP) P51159 (/IMP) |
Multivesicular body organization GO:0036257
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a multivesicular body. A multivesicular body is a type of late endosome in which regions of the limiting endosomal membrane invaginate to form internal vesicles; membrane proteins that enter the internal vesicles are sequestered from the cytoplasm.
|
2 | Q9ERI2 (/ISO) Q9ERI2 (/ISO) |
Neutrophil degranulation GO:0043312
The regulated exocytosis of secretory granules containing preformed mediators such as proteases, lipases, and inflammatory mediators by a neutrophil.
|
2 | P51159 (/TAS) P51159 (/TAS) |
Cytotoxic T cell degranulation GO:0043316
The regulated exocytosis of secretory granules containing preformed mediators such as perforin and granzymes by a cytotoxic T cell.
|
2 | Q9ERI2 (/IMP) Q9ERI2 (/IMP) |
Natural killer cell degranulation GO:0043320
The regulated exocytosis of secretory granules containing preformed mediators such as perforin and granzymes by a natural killer cell.
|
2 | Q9ERI2 (/IMP) Q9ERI2 (/IMP) |
Pigmentation GO:0043473
The accumulation of pigment in an organism, tissue or cell, either by increased deposition or by increased number of cells.
|
2 | Q9ERI2 (/IMP) Q9ERI2 (/IMP) |
Synaptic vesicle endocytosis GO:0048488
A vesicle-mediated transport process, in which the synaptic vesicle membrane constituents are retrieved from the presynaptic membrane on the axon terminal after neurotransmitter secretion by exocytosis. Synaptic vesicle endocytosis can occur via clathrin-dependent and clathrin-independent mechanisms.
|
2 | Q99P58 (/ISO) Q99P58 (/ISO) |
Synaptic vesicle transport GO:0048489
The directed movement of synaptic vesicles.
|
2 | P51159 (/TAS) P51159 (/TAS) |
Positive regulation of phagocytosis GO:0050766
Any process that activates or increases the frequency, rate or extent of phagocytosis.
|
2 | P51159 (/IMP) P51159 (/IMP) |
Positive regulation of phagocytosis GO:0050766
Any process that activates or increases the frequency, rate or extent of phagocytosis.
|
2 | Q9ERI2 (/ISO) Q9ERI2 (/ISO) |
Pigment granule localization GO:0051875
Any process in which a pigment granule is transported to, and/or maintained in, a specific location within the cell.
|
2 | Q9ERI2 (/IMP) Q9ERI2 (/IMP) |
Pigment granule transport GO:0051904
The directed movement of pigment granules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
|
2 | Q9ERI2 (/IMP) Q9ERI2 (/IMP) |
Complement-dependent cytotoxicity GO:0097278
Lysis of a cell resulting from triggering of the complement cascade. An example can be seen with complement activation and subsequent lysis of a bacterial cell as a result of the binding of IgM to the cell surface followed by the binding of complement proteins to that antibody.
|
2 | P51159 (/IMP) P51159 (/IMP) |
Complement-dependent cytotoxicity GO:0097278
Lysis of a cell resulting from triggering of the complement cascade. An example can be seen with complement activation and subsequent lysis of a bacterial cell as a result of the binding of IgM to the cell surface followed by the binding of complement proteins to that antibody.
|
2 | Q9ERI2 (/ISO) Q9ERI2 (/ISO) |
Anterograde axonal protein transport GO:0099641
The directed movement of proteins along microtubules from the cell body toward the cell periphery in nerve cell axons.
|
2 | Q99P58 (/ISO) Q99P58 (/ISO) |
Positive regulation of regulated secretory pathway GO:1903307
Any process that activates or increases the frequency, rate or extent of regulated secretory pathway.
|
2 | P51159 (/IGI) P51159 (/IGI) |
Positive regulation of regulated secretory pathway GO:1903307
Any process that activates or increases the frequency, rate or extent of regulated secretory pathway.
|
2 | P51159 (/IMP) P51159 (/IMP) |
Positive regulation of regulated secretory pathway GO:1903307
Any process that activates or increases the frequency, rate or extent of regulated secretory pathway.
|
2 | Q9ERI2 (/ISO) Q9ERI2 (/ISO) |
Positive regulation of reactive oxygen species biosynthetic process GO:1903428
Any process that activates or increases the frequency, rate or extent of reactive oxygen species biosynthetic process.
|
2 | P51159 (/IMP) P51159 (/IMP) |
Positive regulation of reactive oxygen species biosynthetic process GO:1903428
Any process that activates or increases the frequency, rate or extent of reactive oxygen species biosynthetic process.
|
2 | Q9ERI2 (/ISO) Q9ERI2 (/ISO) |
Positive regulation of constitutive secretory pathway GO:1903435
Any process that activates or increases the frequency, rate or extent of constitutive secretory pathway.
|
2 | P51159 (/IMP) P51159 (/IMP) |
Positive regulation of constitutive secretory pathway GO:1903435
Any process that activates or increases the frequency, rate or extent of constitutive secretory pathway.
|
2 | Q9ERI2 (/ISO) Q9ERI2 (/ISO) |
Exosomal secretion GO:1990182
The process whereby a membrane-bounded vesicle is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane.
|
2 | P51159 (/IMP) P51159 (/IMP) |
Exosomal secretion GO:1990182
The process whereby a membrane-bounded vesicle is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane.
|
2 | Q9ERI2 (/ISO) Q9ERI2 (/ISO) |
Exocytosis GO:0006887
A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle. Exocytosis can occur either by full fusion, when the vesicle collapses into the plasma membrane, or by a kiss-and-run mechanism that involves the formation of a transient contact, a pore, between a granule (for exemple of chromaffin cells) and the plasma membrane. The latter process most of the time leads to only partial secretion of the granule content. Exocytosis begins with steps that prepare vesicles for fusion with the membrane (tethering and docking) and ends when molecules are secreted from the cell.
|
1 | P23640 (/TAS) |
Regulation of exocytosis GO:0017157
Any process that modulates the frequency, rate or extent of exocytosis.
|
1 | Q99P74 (/IDA) |
Synaptic vesicle endocytosis GO:0048488
A vesicle-mediated transport process, in which the synaptic vesicle membrane constituents are retrieved from the presynaptic membrane on the axon terminal after neurotransmitter secretion by exocytosis. Synaptic vesicle endocytosis can occur via clathrin-dependent and clathrin-independent mechanisms.
|
1 | Q99P74 (/IDA) |
Synaptic vesicle endocytosis GO:0048488
A vesicle-mediated transport process, in which the synaptic vesicle membrane constituents are retrieved from the presynaptic membrane on the axon terminal after neurotransmitter secretion by exocytosis. Synaptic vesicle endocytosis can occur via clathrin-dependent and clathrin-independent mechanisms.
|
1 | Q99P74 (/IMP) |
Vesicle tethering involved in exocytosis GO:0090522
The initial, indirect interaction between a secretory vesicle membrane and a site of exocytosis in the plasma membrane. This interaction is mediated by tethering factors (or complexes), which interact with both membranes. Interaction can occur via direct binding to membrane phospholipids or membrane proteins, or via binding to vesicle coat proteins. This process is distinct from and prior to docking and fusion.
|
1 | G5EBS5 (/IMP) |
Anterograde axonal protein transport GO:0099641
The directed movement of proteins along microtubules from the cell body toward the cell periphery in nerve cell axons.
|
1 | Q99P74 (/IMP) |
Positive regulation of cellular protein catabolic process GO:1903364
Any process that activates or increases the frequency, rate or extent of cellular protein catabolic process.
|
1 | G5EBS5 (/IMP) |
Dense core granule exocytosis GO:1990504
The secretion of molecules (e.g. neuropeptides, insulin-related peptides or neuromodulators such as serotonin and dopamine) contained within a membrane-bounced dense core granule by fusion of the granule with the plasma membrane of a cell in response to increased cytosolic calcium levels.
|
1 | G5EBS5 (/IMP) |
Positive regulation of defecation GO:2000294
Any process that activates or increases the frequency, rate or extent of defecation.
|
1 | G5EBS5 (/IMP) |
There are 40 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Melanosome GO:0042470
A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells.
|
6 | O00194 (/IDA) O00194 (/IDA) P51159 (/IDA) P51159 (/IDA) Q9ERI2 (/IDA) Q9ERI2 (/IDA) |
Golgi apparatus GO:0005794
A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions.
|
4 | Q99P58 (/IDA) Q99P58 (/IDA) Q9ERI2 (/IDA) Q9ERI2 (/IDA) |
Apical plasma membrane GO:0016324
The region of the plasma membrane located at the apical end of the cell.
|
4 | Q99P58 (/ISO) Q99P58 (/ISO) Q9ERI2 (/ISO) Q9ERI2 (/ISO) |
Secretory granule membrane GO:0030667
The lipid bilayer surrounding a secretory granule.
|
4 | Q99P58 (/ISO) Q99P58 (/ISO) Q9ERI2 (/ISO) Q9ERI2 (/ISO) |
Multivesicular body membrane GO:0032585
The lipid bilayer surrounding a multivesicular body.
|
4 | O00194 (/IDA) O00194 (/IDA) P51159 (/IDA) P51159 (/IDA) |
Multivesicular body membrane GO:0032585
The lipid bilayer surrounding a multivesicular body.
|
4 | Q99P58 (/ISO) Q99P58 (/ISO) Q9ERI2 (/ISO) Q9ERI2 (/ISO) |
Melanosome GO:0042470
A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells.
|
4 | Q99P58 (/ISO) Q99P58 (/ISO) Q9ERI2 (/ISO) Q9ERI2 (/ISO) |
Extracellular exosome GO:0070062
A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
|
4 | O00194 (/HDA) O00194 (/HDA) P51159 (/HDA) P51159 (/HDA) |
Photoreceptor outer segment GO:0001750
The outer segment of a vertebrate photoreceptor that contains a stack of membrane discs embedded with photoreceptor proteins.
|
2 | Q9ERI2 (/IDA) Q9ERI2 (/IDA) |
Extracellular region GO:0005576
The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
|
2 | P51159 (/TAS) P51159 (/TAS) |
Lysosome GO:0005764
A small lytic vacuole that has cell cycle-independent morphology and is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions.
|
2 | P51159 (/IDA) P51159 (/IDA) |
Lysosome GO:0005764
A small lytic vacuole that has cell cycle-independent morphology and is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions.
|
2 | Q9ERI2 (/ISO) Q9ERI2 (/ISO) |
Late endosome GO:0005770
A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center.
|
2 | P51159 (/IDA) P51159 (/IDA) |
Late endosome GO:0005770
A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center.
|
2 | Q9ERI2 (/ISO) Q9ERI2 (/ISO) |
Golgi stack GO:0005795
The set of thin, flattened membrane-bounded compartments, called cisternae, that form the central portion of the Golgi complex. The stack usually comprises cis, medial, and trans cisternae; the cis- and trans-Golgi networks are not considered part of the stack.
|
2 | O00194 (/IDA) O00194 (/IDA) |
Golgi stack GO:0005795
The set of thin, flattened membrane-bounded compartments, called cisternae, that form the central portion of the Golgi complex. The stack usually comprises cis, medial, and trans cisternae; the cis- and trans-Golgi networks are not considered part of the stack.
|
2 | Q99P58 (/ISO) Q99P58 (/ISO) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
2 | P51159 (/TAS) P51159 (/TAS) |
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
|
2 | O00194 (/TAS) O00194 (/TAS) |
Apical plasma membrane GO:0016324
The region of the plasma membrane located at the apical end of the cell.
|
2 | P23640 (/IDA) Q99P74 (/IDA) |
Trans-Golgi network transport vesicle GO:0030140
A vesicle that mediates transport between the trans-Golgi network and other parts of the cell.
|
2 | O00194 (/IDA) O00194 (/IDA) |
Trans-Golgi network transport vesicle GO:0030140
A vesicle that mediates transport between the trans-Golgi network and other parts of the cell.
|
2 | Q99P58 (/ISO) Q99P58 (/ISO) |
Secretory granule GO:0030141
A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell and upon stimulation, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules.
|
2 | Q9ERI2 (/IMP) Q9ERI2 (/IMP) |
Secretory granule GO:0030141
A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell and upon stimulation, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules.
|
2 | Q9ERI2 (/ISO) Q9ERI2 (/ISO) |
Dendrite GO:0030425
A neuron projection that has a short, tapering, morphology. Dendrites receive and integrate signals from other neurons or from sensory stimuli, and conduct nerve impulses towards the axon or the cell body. In most neurons, the impulse is conveyed from dendrites to axon via the cell body, but in some types of unipolar neuron, the impulse does not travel via the cell body.
|
2 | P51159 (/IDA) P51159 (/IDA) |
Dendrite GO:0030425
A neuron projection that has a short, tapering, morphology. Dendrites receive and integrate signals from other neurons or from sensory stimuli, and conduct nerve impulses towards the axon or the cell body. In most neurons, the impulse is conveyed from dendrites to axon via the cell body, but in some types of unipolar neuron, the impulse does not travel via the cell body.
|
2 | Q9ERI2 (/ISO) Q9ERI2 (/ISO) |
Secretory granule membrane GO:0030667
The lipid bilayer surrounding a secretory granule.
|
2 | P23640 (/IDA) Q99P74 (/IDA) |
Platelet dense granule membrane GO:0031088
The lipid bilayer surrounding the platelet dense granule.
|
2 | O00194 (/TAS) O00194 (/TAS) |
Weibel-Palade body GO:0033093
A large, elongated, rod-shaped secretory granule characteristic of vascular endothelial cells that contain a number of structurally and functionally distinct proteins, of which the best characterized are von Willebrand factor (VWF) and P-selectin. Weibel-Palade bodies are formed from the trans-Golgi network in a process that depends on VWF, which is densely packed in a highly organized manner, and on coat proteins that remain associated with the granules. Upon cell stimulation, regulated exocytosis releases the contained proteins to the cell surface, where they act in the recruitment of platelets and leukocytes and in inflammatory and vasoactive responses.
|
2 | Q9ERI2 (/ISO) Q9ERI2 (/ISO) |
Melanosome membrane GO:0033162
The lipid bilayer surrounding a melanosome.
|
2 | P51159 (/TAS) P51159 (/TAS) |
Specific granule lumen GO:0035580
The volume enclosed by the membrane of a specific granule, a granule with a membranous, tubular internal structure, found primarily in mature neutrophil cells. Most are released into the extracellular fluid. Specific granules contain lactoferrin, lysozyme, vitamin B12 binding protein and elastase.
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2 | P51159 (/TAS) P51159 (/TAS) |
Zymogen granule membrane GO:0042589
The lipid bilayer surrounding a zymogen granule.
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2 | Q99P58 (/ISO) Q99P58 (/ISO) |
Exocytic vesicle GO:0070382
A transport vesicle that mediates transport from an intracellular compartment to the plasma membrane, and fuses with the plasma membrane to release various cargo molecules, such as proteins or hormones, by exocytosis.
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2 | P51159 (/IDA) P51159 (/IDA) |
Exocytic vesicle GO:0070382
A transport vesicle that mediates transport from an intracellular compartment to the plasma membrane, and fuses with the plasma membrane to release various cargo molecules, such as proteins or hormones, by exocytosis.
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2 | Q9ERI2 (/ISO) Q9ERI2 (/ISO) |
Anchored component of synaptic vesicle membrane GO:0098993
The component of the synaptic vesicle membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.
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2 | Q99P58 (/ISO) Q99P58 (/ISO) |
Synaptic vesicle GO:0008021
A secretory organelle, typically 50 nm in diameter, of presynaptic nerve terminals; accumulates in high concentrations of neurotransmitters and secretes these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane.
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1 | G5EBS5 (/IDA) |
Secretory granule GO:0030141
A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell and upon stimulation, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules.
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1 | P23640 (/IDA) |
Weibel-Palade body GO:0033093
A large, elongated, rod-shaped secretory granule characteristic of vascular endothelial cells that contain a number of structurally and functionally distinct proteins, of which the best characterized are von Willebrand factor (VWF) and P-selectin. Weibel-Palade bodies are formed from the trans-Golgi network in a process that depends on VWF, which is densely packed in a highly organized manner, and on coat proteins that remain associated with the granules. Upon cell stimulation, regulated exocytosis releases the contained proteins to the cell surface, where they act in the recruitment of platelets and leukocytes and in inflammatory and vasoactive responses.
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1 | P23640 (/IDA) |
Zymogen granule membrane GO:0042589
The lipid bilayer surrounding a zymogen granule.
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1 | Q99P74 (/IDA) |
Anchored component of synaptic vesicle membrane GO:0098993
The component of the synaptic vesicle membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.
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1 | Q99P74 (/EXP) |
Anchored component of synaptic vesicle membrane GO:0098993
The component of the synaptic vesicle membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.
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1 | Q99P74 (/IDA) |