The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:

"
P-loop containing nucleotide triphosphate hydrolases
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
« Back to all FunFams

FunFam 188: signal recognition particle receptor subunit alpha

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 6 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Signal recognition particle binding GO:0005047
Interacting selectively and non-covalently with the signal recognition particle.
10 Q8ID42 (/RCA) Q8ID42 (/RCA) Q8ID42 (/RCA) Q8ID42 (/RCA) Q8ID42 (/RCA) Q8ID42 (/RCA) Q8ID42 (/RCA) Q8ID42 (/RCA) Q8ID42 (/RCA) Q8ID42 (/RCA)
GTP binding GO:0005525
Interacting selectively and non-covalently with GTP, guanosine triphosphate.
10 Q8ID42 (/RCA) Q8ID42 (/RCA) Q8ID42 (/RCA) Q8ID42 (/RCA) Q8ID42 (/RCA) Q8ID42 (/RCA) Q8ID42 (/RCA) Q8ID42 (/RCA) Q8ID42 (/RCA) Q8ID42 (/RCA)
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
3 P08240 (/HDA) P08240 (/HDA) P08240 (/HDA)
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
2 Q9U5L1 (/NAS) Q9U5L1 (/NAS)
Signal recognition particle binding GO:0005047
Interacting selectively and non-covalently with the signal recognition particle.
2 Q383U0 (/ISA) Q383U0 (/ISA)
Signal recognition particle binding GO:0005047
Interacting selectively and non-covalently with the signal recognition particle.
1 Q54ZR7 (/ISS)

There are 6 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Cotranslational protein targeting to membrane GO:0006613
The targeting of proteins to a membrane that occurs during translation. The transport of most secretory proteins, particularly those with more than 100 amino acids, into the endoplasmic reticulum lumen occurs in this manner, as does the import of some proteins into mitochondria.
3 P08240 (/TAS) P08240 (/TAS) P08240 (/TAS)
IRE1-mediated unfolded protein response GO:0036498
A series of molecular signals mediated by the endoplasmic reticulum stress sensor IRE1 (Inositol-requiring transmembrane kinase/endonuclease). Begins with activation of IRE1 in response to endoplasmic reticulum (ER) stress, and ends with regulation of a downstream cellular process, e.g. transcription. One target of activated IRE1 is the transcription factor HAC1 in yeast, or XBP1 in mammals; IRE1 cleaves an intron of a mRNA coding for HAC1/XBP1 to generate an activated HAC1/XBP1 transcription factor, which controls the up regulation of UPR-related genes. At least in mammals, IRE1 can also signal through additional intracellular pathways including JNK and NF-kappaB.
3 P08240 (/TAS) P08240 (/TAS) P08240 (/TAS)
Cotranslational protein targeting to membrane GO:0006613
The targeting of proteins to a membrane that occurs during translation. The transport of most secretory proteins, particularly those with more than 100 amino acids, into the endoplasmic reticulum lumen occurs in this manner, as does the import of some proteins into mitochondria.
2 Q383U0 (/ISA) Q383U0 (/ISA)
Axonogenesis GO:0007409
De novo generation of a long process of a neuron, including the terminal branched region. Refers to the morphogenesis or creation of shape or form of the developing axon, which carries efferent (outgoing) action potentials from the cell body towards target cells.
2 Q9U5L1 (/IEP) Q9U5L1 (/IEP)
Regulation of protein secretion GO:0050708
Any process that modulates the frequency, rate or extent of the controlled release of a protein from a cell.
2 Q9U5L1 (/IEP) Q9U5L1 (/IEP)
Protein targeting to ER GO:0045047
The process of directing proteins towards the endoplasmic reticulum (ER) using signals contained within the protein. One common mechanism uses a 16- to 30-residue signal sequence, typically located at the N-terminus of the protein and containing positively charged amino acids followed by a continuous stretch of hydrophobic residues, which directs the ribosome to the ER membrane and initiates transport of the growing polypeptide across the ER membrane.
1 Q54ZR7 (/ISS)

There are 13 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Signal recognition particle receptor complex GO:0005785
A transmembrane heterodimeric protein located in the membrane of the rough endoplasmic reticulum. Both subunits contain GTPase domains with which signal recognition particle interacts. In the presence of GTP and SRP receptor, SRP is released from the ribosome-nascent chain complex.
10 Q8ID42 (/RCA) Q8ID42 (/RCA) Q8ID42 (/RCA) Q8ID42 (/RCA) Q8ID42 (/RCA) Q8ID42 (/RCA) Q8ID42 (/RCA) Q8ID42 (/RCA) Q8ID42 (/RCA) Q8ID42 (/RCA)
Endoplasmic reticulum GO:0005783
The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
4 Q383U0 (/IDA) Q383U0 (/IDA) Q9M0A0 (/IDA) Q9M0A0 (/IDA)
Endoplasmic reticulum membrane GO:0005789
The lipid bilayer surrounding the endoplasmic reticulum.
4 P06625 (/TAS) P08240 (/TAS) P08240 (/TAS) P08240 (/TAS)
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
3 P08240 (/IDA) P08240 (/IDA) P08240 (/IDA)
Extracellular exosome GO:0070062
A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
3 P08240 (/HDA) P08240 (/HDA) P08240 (/HDA)
Nuclear envelope GO:0005635
The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space).
2 Q383U0 (/IDA) Q383U0 (/IDA)
Signal recognition particle receptor complex GO:0005785
A transmembrane heterodimeric protein located in the membrane of the rough endoplasmic reticulum. Both subunits contain GTPase domains with which signal recognition particle interacts. In the presence of GTP and SRP receptor, SRP is released from the ribosome-nascent chain complex.
2 Q383U0 (/ISA) Q383U0 (/ISA)
Endoplasmic reticulum membrane GO:0005789
The lipid bilayer surrounding the endoplasmic reticulum.
2 Q9U5L1 (/IDA) Q9U5L1 (/IDA)
Endomembrane system GO:0012505
A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles.
2 Q9U5L1 (/HDA) Q9U5L1 (/HDA)
Nuclear envelope GO:0005635
The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space).
1 Q4Q161 (/ISO)
Endoplasmic reticulum GO:0005783
The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
1 Q4Q161 (/ISO)
Endoplasmic reticulum membrane GO:0005789
The lipid bilayer surrounding the endoplasmic reticulum.
1 Q54ZR7 (/ISS)
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
1 Q9DBG7 (/ISO)
CATH-Gene3D is a Global Biodata Core Resource Learn more...