The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:

"
Succinyl-CoA synthetase domains
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
« Back to all FunFams

FunFam 1: Succinate--CoA ligase [ADP-forming] subunit beta

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 22 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Succinate-CoA ligase (ADP-forming) activity GO:0004775
Catalysis of the reaction: ATP + succinate + CoA = ADP + succinyl-CoA + phosphate.
157 P0A836 (/IMP) P0A836 (/IMP) P0A836 (/IMP) P0A836 (/IMP) P0A836 (/IMP) P0A836 (/IMP) P0A836 (/IMP) P0A836 (/IMP) P0A836 (/IMP) P0A836 (/IMP)
(147 more)
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
157 E5KS60 (/IPI) E5KS60 (/IPI) P0A836 (/IPI) P0A836 (/IPI) P0A836 (/IPI) P0A836 (/IPI) P0A836 (/IPI) P0A836 (/IPI) P0A836 (/IPI) P0A836 (/IPI)
(147 more)
Succinate-CoA ligase (ADP-forming) activity GO:0004775
Catalysis of the reaction: ATP + succinate + CoA = ADP + succinyl-CoA + phosphate.
30 A0A0B4JCW4 (/ISS) A0A126GUR6 (/ISS) Q2GFL7 (/ISS) Q2GJ42 (/ISS) Q2GJ42 (/ISS) Q2GJ42 (/ISS) Q5HVN3 (/ISS) Q5HVN3 (/ISS) Q5HVN3 (/ISS) Q5HVN3 (/ISS)
(20 more)
Succinate-CoA ligase (ADP-forming) activity GO:0004775
Catalysis of the reaction: ATP + succinate + CoA = ADP + succinyl-CoA + phosphate.
19 F1LM47 (/IDA) P53312 (/IDA) P53312 (/IDA) P53312 (/IDA) P53312 (/IDA) P53312 (/IDA) P53312 (/IDA) P53593 (/IDA) P53593 (/IDA) P53593 (/IDA)
(9 more)
Nucleoside diphosphate kinase activity GO:0004550
Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate.
11 P53593 (/IDA) P53593 (/IDA) P53593 (/IDA) P53593 (/IDA) P53593 (/IDA) P53593 (/IDA) P53593 (/IDA) P53593 (/IDA) P53593 (/IDA) P53593 (/IDA)
(1 more)
Succinate-CoA ligase activity GO:0004774
Catalysis of the reaction: succinate + CoA + nucleotide triphosphate = nucleotide diphosphate + phosphate + succinyl-CoA.
2 A0A1D8PTB5 (/NAS) A0A1D8PTB5 (/NAS)
Succinate-CoA ligase (ADP-forming) activity GO:0004775
Catalysis of the reaction: ATP + succinate + CoA = ADP + succinyl-CoA + phosphate.
2 Q9P2R7 (/TAS) Q9P2R7 (/TAS)
Succinate-CoA ligase (GDP-forming) activity GO:0004776
Catalysis of the reaction: GTP + succinate + CoA = GDP + succinyl-CoA + phosphate.
2 B1H270 (/IDA) F1LPV8 (/IDA)
Succinate-CoA ligase (GDP-forming) activity GO:0004776
Catalysis of the reaction: GTP + succinate + CoA = GDP + succinyl-CoA + phosphate.
2 Q96I99 (/NAS) Q96I99 (/NAS)
GDP binding GO:0019003
Interacting selectively and non-covalently with GDP, guanosine 5'-diphosphate.
2 B1H270 (/IDA) F1LPV8 (/IDA)
Protein heterodimerization activity GO:0046982
Interacting selectively and non-covalently with a nonidentical protein to form a heterodimer.
2 B1H270 (/IDA) F1LPV8 (/IDA)
Succinate-CoA ligase activity GO:0004774
Catalysis of the reaction: succinate + CoA + nucleotide triphosphate = nucleotide diphosphate + phosphate + succinyl-CoA.
1 Q9Z2I9 (/ISS)
Succinate-CoA ligase (ADP-forming) activity GO:0004775
Catalysis of the reaction: ATP + succinate + CoA = ADP + succinyl-CoA + phosphate.
1 Q9Z2I9 (/ISO)
Succinate-CoA ligase (ADP-forming) activity GO:0004775
Catalysis of the reaction: ATP + succinate + CoA = ADP + succinyl-CoA + phosphate.
1 C8VC98 (/RCA)
Succinate-CoA ligase (GDP-forming) activity GO:0004776
Catalysis of the reaction: GTP + succinate + CoA = GDP + succinyl-CoA + phosphate.
1 Q9Z2I8 (/ISO)
Succinate-CoA ligase (GDP-forming) activity GO:0004776
Catalysis of the reaction: GTP + succinate + CoA = GDP + succinyl-CoA + phosphate.
1 Q9V470 (/ISS)
Succinate-semialdehyde dehydrogenase (NAD+) activity GO:0004777
Catalysis of the reaction: succinate semialdehyde + NAD+ + H2O = succinate + NADH + H+.
1 Q9Z2I8 (/ISA)
Copper ion binding GO:0005507
Interacting selectively and non-covalently with copper (Cu) ions.
1 O82662 (/IDA)
ATP binding GO:0005524
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
1 O82662 (/IDA)
GDP binding GO:0019003
Interacting selectively and non-covalently with GDP, guanosine 5'-diphosphate.
1 Q9Z2I8 (/ISO)
Protein heterodimerization activity GO:0046982
Interacting selectively and non-covalently with a nonidentical protein to form a heterodimer.
1 Q9Z2I8 (/ISO)
Malate-CoA ligase activity GO:0050074
Catalysis of the reaction: ATP + malate + CoA = ADP + phosphate + malyl-CoA.
1 Q5LT46 (/ISS)

There are 19 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Tricarboxylic acid cycle GO:0006099
A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle.
151 P0A836 (/IMP) P0A836 (/IMP) P0A836 (/IMP) P0A836 (/IMP) P0A836 (/IMP) P0A836 (/IMP) P0A836 (/IMP) P0A836 (/IMP) P0A836 (/IMP) P0A836 (/IMP)
(141 more)
Tricarboxylic acid cycle GO:0006099
A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle.
31 A0A0B4JCW4 (/ISS) A0A126GUR6 (/ISS) Q2GFL7 (/ISS) Q2GJ42 (/ISS) Q2GJ42 (/ISS) Q2GJ42 (/ISS) Q5HVN3 (/ISS) Q5HVN3 (/ISS) Q5HVN3 (/ISS) Q5HVN3 (/ISS)
(21 more)
Nucleoside triphosphate biosynthetic process GO:0009142
The chemical reactions and pathways resulting in the formation of a nucleoside triphosphate, a compound consisting of a nucleobase linked to a deoxyribose or ribose sugar esterified with triphosphate on the sugar.
11 P53593 (/IDA) P53593 (/IDA) P53593 (/IDA) P53593 (/IDA) P53593 (/IDA) P53593 (/IDA) P53593 (/IDA) P53593 (/IDA) P53593 (/IDA) P53593 (/IDA)
(1 more)
Protein autophosphorylation GO:0046777
The phosphorylation by a protein of one or more of its own amino acid residues (cis-autophosphorylation), or residues on an identical protein (trans-autophosphorylation).
11 P53593 (/IDA) P53593 (/IDA) P53593 (/IDA) P53593 (/IDA) P53593 (/IDA) P53593 (/IDA) P53593 (/IDA) P53593 (/IDA) P53593 (/IDA) P53593 (/IDA)
(1 more)
Tricarboxylic acid cycle GO:0006099
A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle.
10 P53312 (/TAS) P53312 (/TAS) P53312 (/TAS) P53312 (/TAS) P53312 (/TAS) P53312 (/TAS) Q96I99 (/TAS) Q96I99 (/TAS) Q9P2R7 (/TAS) Q9P2R7 (/TAS)
Succinyl-CoA metabolic process GO:0006104
The chemical reactions and pathways involving succinyl-CoA, a compound composed of the monovalent acyl group 3-carboxypropanoyl, derived from succinic acid by loss of one OH group, linked to coenzyme A.
10 B1H270 (/IDA) F1LM47 (/IDA) F1LPV8 (/IDA) P53312 (/IDA) P53312 (/IDA) P53312 (/IDA) P53312 (/IDA) P53312 (/IDA) P53312 (/IDA) Q84LB6 (/IDA)
Tricarboxylic acid cycle GO:0006099
A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle.
4 B1H270 (/IDA) F1LM47 (/IDA) F1LPV8 (/IDA) Q84LB6 (/IDA)
Succinate metabolic process GO:0006105
The chemical reactions and pathways involving succinate, also known as butanedioate or ethane dicarboxylate, the dianion of succinic acid. Succinate is an important intermediate in metabolism and a component of the TCA cycle.
4 B1H270 (/IDA) F1LM47 (/IDA) F1LPV8 (/IDA) Q84LB6 (/IDA)
Sperm individualization GO:0007291
The resolution of the male germline syncytium or cyst into individual gametes by packaging each spermatid into its own plasma membrane.
4 A0A0B4JCW4 (/IMP) A0A126GUR6 (/IMP) Q95U38 (/IMP) Q9VHJ8 (/IMP)
Positive regulation of cysteine-type endopeptidase activity involved in apoptotic process GO:0043280
Any process that activates or increases the activity of a cysteine-type endopeptidase involved in the apoptotic process.
4 A0A0B4JCW4 (/IMP) A0A126GUR6 (/IMP) Q95U38 (/IMP) Q9VHJ8 (/IMP)
Tricarboxylic acid cycle GO:0006099
A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle.
3 O94415 (/ISO) Q9Z2I8 (/ISO) Q9Z2I9 (/ISO)
Succinyl-CoA metabolic process GO:0006104
The chemical reactions and pathways involving succinyl-CoA, a compound composed of the monovalent acyl group 3-carboxypropanoyl, derived from succinic acid by loss of one OH group, linked to coenzyme A.
3 O94415 (/ISO) Q9Z2I8 (/ISO) Q9Z2I9 (/ISO)
Succinyl-CoA metabolic process GO:0006104
The chemical reactions and pathways involving succinyl-CoA, a compound composed of the monovalent acyl group 3-carboxypropanoyl, derived from succinic acid by loss of one OH group, linked to coenzyme A.
2 Q96I99 (/NAS) Q96I99 (/NAS)
Succinyl-CoA metabolic process GO:0006104
The chemical reactions and pathways involving succinyl-CoA, a compound composed of the monovalent acyl group 3-carboxypropanoyl, derived from succinic acid by loss of one OH group, linked to coenzyme A.
2 Q9P2R7 (/TAS) Q9P2R7 (/TAS)
Succinate metabolic process GO:0006105
The chemical reactions and pathways involving succinate, also known as butanedioate or ethane dicarboxylate, the dianion of succinic acid. Succinate is an important intermediate in metabolism and a component of the TCA cycle.
2 Q9Z2I8 (/ISO) Q9Z2I9 (/ISO)
Succinyl-CoA pathway GO:0006781
The chemical reactions that utilize succinyl-CoA in the synthesis of protoporphyrin IX.
2 Q9P2R7 (/NAS) Q9P2R7 (/NAS)
Tricarboxylic acid cycle GO:0006099
A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle.
1 C8VC98 (/RCA)
Energy derivation by oxidation of organic compounds GO:0015980
The chemical reactions and pathways by which a cell derives energy from organic compounds; results in the oxidation of the compounds from which energy is released.
1 Q5LT46 (/ISS)
Response to cadmium ion GO:0046686
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cadmium (Cd) ion stimulus.
1 O82662 (/IEP)

There are 22 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
151 P0A836 (/HDA) P0A836 (/HDA) P0A836 (/HDA) P0A836 (/HDA) P0A836 (/HDA) P0A836 (/HDA) P0A836 (/HDA) P0A836 (/HDA) P0A836 (/HDA) P0A836 (/HDA)
(141 more)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
151 P0A836 (/IDA) P0A836 (/IDA) P0A836 (/IDA) P0A836 (/IDA) P0A836 (/IDA) P0A836 (/IDA) P0A836 (/IDA) P0A836 (/IDA) P0A836 (/IDA) P0A836 (/IDA)
(141 more)
Succinate-CoA ligase complex (ADP-forming) GO:0009361
A heterodimeric enzyme complex, composed of an alpha and beta chain, most usually found in (but not limited to) bacteria. Functions in the TCA cycle, hydrolyzing succinyl-CoA into succinate and CoA, thereby forming ATP.
151 P0A836 (/IDA) P0A836 (/IDA) P0A836 (/IDA) P0A836 (/IDA) P0A836 (/IDA) P0A836 (/IDA) P0A836 (/IDA) P0A836 (/IDA) P0A836 (/IDA) P0A836 (/IDA)
(141 more)
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
24 A0A024R325 (/IDA) A0A024R325 (/IDA) A0A0B4JCW4 (/IDA) A0A126GUR6 (/IDA) B1H270 (/IDA) E5KS60 (/IDA) E5KS60 (/IDA) F1LM47 (/IDA) F1LPV8 (/IDA) O82662 (/IDA)
(14 more)
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
16 A0A0B4JCW4 (/HDA) A0A126GUR6 (/HDA) O94415 (/HDA) P53312 (/HDA) P53312 (/HDA) P53312 (/HDA) P53312 (/HDA) P53312 (/HDA) P53312 (/HDA) P53588 (/HDA)
(6 more)
Succinate-CoA ligase complex GO:0042709
A heterodimeric enzyme complex, usually composed of an alpha and beta chain. Functions in the TCA cycle, hydrolyzing succinyl-CoA into succinate and CoA, thereby forming ATP or GTP.
11 P53593 (/IDA) P53593 (/IDA) P53593 (/IDA) P53593 (/IDA) P53593 (/IDA) P53593 (/IDA) P53593 (/IDA) P53593 (/IDA) P53593 (/IDA) P53593 (/IDA)
(1 more)
Succinate-CoA ligase complex (ADP-forming) GO:0009361
A heterodimeric enzyme complex, composed of an alpha and beta chain, most usually found in (but not limited to) bacteria. Functions in the TCA cycle, hydrolyzing succinyl-CoA into succinate and CoA, thereby forming ATP.
10 A0A0B4JCW4 (/ISS) A0A126GUR6 (/ISS) Q5HVN3 (/ISS) Q5HVN3 (/ISS) Q5HVN3 (/ISS) Q5HVN3 (/ISS) Q5HVN3 (/ISS) Q5HVN3 (/ISS) Q95U38 (/ISS) Q9VHJ8 (/ISS)
Mitochondrial matrix GO:0005759
The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty acid oxidation.
4 Q96I99 (/TAS) Q96I99 (/TAS) Q9P2R7 (/TAS) Q9P2R7 (/TAS)
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
4 A0A024R325 (/IDA) A0A024R325 (/IDA) Q96I99 (/IDA) Q96I99 (/IDA)
Cul3-RING ubiquitin ligase complex GO:0031463
A ubiquitin ligase complex in which a cullin from the Cul3 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a BTB-domain-containing protein.
4 A0A0B4JCW4 (/IDA) A0A126GUR6 (/IDA) Q95U38 (/IDA) Q9VHJ8 (/IDA)
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
3 Q38AM2 (/ISO) Q9Z2I8 (/ISO) Q9Z2I9 (/ISO)
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
2 Q55AI5 (/ISS) Q869S7 (/ISS)
Protein-containing complex GO:0032991
A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together.
2 B1H270 (/IDA) F1LPV8 (/IDA)
Succinate-CoA ligase complex (GDP-forming) GO:0045244
A heterodimeric enzyme complex, usually composed of an alpha and beta chain. Functions in the TCA cycle, hydrolyzing succinyl-CoA into succinate and CoA, thereby forming GTP.
2 B1H270 (/IDA) F1LPV8 (/IDA)
Extracellular exosome GO:0070062
A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
2 Q9P2R7 (/HDA) Q9P2R7 (/HDA)
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
1 Q4Q1C4 (/RCA)
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
1 Q9Z2I8 (/ISO)
Protein-containing complex GO:0032991
A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together.
1 Q9Z2I8 (/ISO)
Succinate-CoA ligase complex GO:0042709
A heterodimeric enzyme complex, usually composed of an alpha and beta chain. Functions in the TCA cycle, hydrolyzing succinyl-CoA into succinate and CoA, thereby forming ATP or GTP.
1 O94415 (/IC)
Myelin sheath GO:0043209
An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system.
1 Q9Z2I9 (/HDA)
Succinate-CoA ligase complex (GDP-forming) GO:0045244
A heterodimeric enzyme complex, usually composed of an alpha and beta chain. Functions in the TCA cycle, hydrolyzing succinyl-CoA into succinate and CoA, thereby forming GTP.
1 Q9Z2I8 (/ISO)
Succinate-CoA ligase complex (GDP-forming) GO:0045244
A heterodimeric enzyme complex, usually composed of an alpha and beta chain. Functions in the TCA cycle, hydrolyzing succinyl-CoA into succinate and CoA, thereby forming GTP.
1 Q9V470 (/ISS)
CATH-Gene3D is a Global Biodata Core Resource Learn more...