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CATH Superfamily 3.40.50.150

Vaccinia Virus protein VP39

The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:

"
Vaccinia Virus protein VP39
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 37: Ribosomal RNA large subunit methyltransferase J

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 3 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
 17 P37634 (/IPI) P37634 (/IPI) P37634 (/IPI) P37634 (/IPI) P37634 (/IPI) P37634 (/IPI) P37634 (/IPI) P37634 (/IPI) P37634 (/IPI) P37634 (/IPI)
(7 more)
RRNA (adenine-N6-)-methyltransferase activity GO:0008988
Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing N6-methyladenine.
 17 P37634 (/IDA) P37634 (/IDA) P37634 (/IDA) P37634 (/IDA) P37634 (/IDA) P37634 (/IDA) P37634 (/IDA) P37634 (/IDA) P37634 (/IDA) P37634 (/IDA)
(7 more)
23S rRNA (adenine(2030)-N(6))-methyltransferase activity GO:0036307
Catalysis of the reaction: S-adenosyl-L-methionine + adenine(2030) in 23S rRNA = S-adenosyl-L-homocysteine + rRNA containing N(6)-methyladenine(2030) in 23S rRNA.
 17 P37634 (/IDA) P37634 (/IDA) P37634 (/IDA) P37634 (/IDA) P37634 (/IDA) P37634 (/IDA) P37634 (/IDA) P37634 (/IDA) P37634 (/IDA) P37634 (/IDA)
(7 more)

There are 3 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Carbon utilization GO:0015976
A series of processes that forms an integrated mechanism by which a cell or an organism detects the depletion of primary carbon sources and then activates genes to scavenge the last traces of the primary carbon source and to transport and metabolize alternative carbon sources such as carbon dioxide or carbonic acid. The utilization process begins when the cell or organism detects carbon levels, includes the activation of genes whose products detect, transport or metabolize carbon-containing substances, and ends when carbon is incorporated into the cell or organism's metabolism.
 17 P37634 (/IMP) P37634 (/IMP) P37634 (/IMP) P37634 (/IMP) P37634 (/IMP) P37634 (/IMP) P37634 (/IMP) P37634 (/IMP) P37634 (/IMP) P37634 (/IMP)
(7 more)
RRNA base methylation GO:0070475
The addition of a methyl group to an atom in the nucleoside base portion of a nucleotide residue in an rRNA molecule.
 17 P37634 (/IDA) P37634 (/IDA) P37634 (/IDA) P37634 (/IDA) P37634 (/IDA) P37634 (/IDA) P37634 (/IDA) P37634 (/IDA) P37634 (/IDA) P37634 (/IDA)
(7 more)
RRNA base methylation GO:0070475
The addition of a methyl group to an atom in the nucleoside base portion of a nucleotide residue in an rRNA molecule.
 17 P37634 (/IMP) P37634 (/IMP) P37634 (/IMP) P37634 (/IMP) P37634 (/IMP) P37634 (/IMP) P37634 (/IMP) P37634 (/IMP) P37634 (/IMP) P37634 (/IMP)
(7 more)

There are 1 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
 17 P37634 (/IDA) P37634 (/IDA) P37634 (/IDA) P37634 (/IDA) P37634 (/IDA) P37634 (/IDA) P37634 (/IDA) P37634 (/IDA) P37634 (/IDA) P37634 (/IDA)
(7 more)