The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"Vaccinia Virus protein VP39
".
FunFam 192: NOP2p rRNA m5C methyltransferase
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 5 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
4 | P40991 (/IPI) P40991 (/IPI) P40991 (/IPI) P40991 (/IPI) |
RRNA (cytosine-C5-)-methyltransferase activity GO:0009383
Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to cytosine to form 5-methylcytosine in small subunit ribosomal RNA.
|
4 | P40991 (/EXP) P40991 (/EXP) P40991 (/EXP) P40991 (/EXP) |
RRNA (cytosine-C5-)-methyltransferase activity GO:0009383
Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to cytosine to form 5-methylcytosine in small subunit ribosomal RNA.
|
4 | P40991 (/IDA) P40991 (/IDA) P40991 (/IDA) P40991 (/IDA) |
RRNA (cytosine-C5-)-methyltransferase activity GO:0009383
Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to cytosine to form 5-methylcytosine in small subunit ribosomal RNA.
|
4 | P40991 (/IGI) P40991 (/IGI) P40991 (/IGI) P40991 (/IGI) |
RRNA (cytosine-C5-)-methyltransferase activity GO:0009383
Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to cytosine to form 5-methylcytosine in small subunit ribosomal RNA.
|
4 | P40991 (/IMP) P40991 (/IMP) P40991 (/IMP) P40991 (/IMP) |
There are 7 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0000463
Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.
|
4 | P40991 (/IMP) P40991 (/IMP) P40991 (/IMP) P40991 (/IMP) |
RRNA methylation GO:0031167
The posttranscriptional addition of methyl groups to specific residues in an rRNA molecule.
|
4 | P40991 (/TAS) P40991 (/TAS) P40991 (/TAS) P40991 (/TAS) |
Ribosomal large subunit biogenesis GO:0042273
A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a large ribosomal subunit; includes transport to the sites of protein synthesis.
|
4 | P40991 (/IMP) P40991 (/IMP) P40991 (/IMP) P40991 (/IMP) |
RRNA base methylation GO:0070475
The addition of a methyl group to an atom in the nucleoside base portion of a nucleotide residue in an rRNA molecule.
|
4 | P40991 (/IDA) P40991 (/IDA) P40991 (/IDA) P40991 (/IDA) |
RRNA base methylation GO:0070475
The addition of a methyl group to an atom in the nucleoside base portion of a nucleotide residue in an rRNA molecule.
|
4 | P40991 (/IGI) P40991 (/IGI) P40991 (/IGI) P40991 (/IGI) |
RRNA base methylation GO:0070475
The addition of a methyl group to an atom in the nucleoside base portion of a nucleotide residue in an rRNA molecule.
|
4 | P40991 (/IMP) P40991 (/IMP) P40991 (/IMP) P40991 (/IMP) |
Assembly of large subunit precursor of preribosome GO:1902626
The aggregation, arrangement and bonding together of a set of components to form the large subunit precursor of the preribosome.
|
4 | P40991 (/IMP) P40991 (/IMP) P40991 (/IMP) P40991 (/IMP) |
There are 6 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
4 | P40991 (/HDA) P40991 (/HDA) P40991 (/HDA) P40991 (/HDA) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
4 | P40991 (/TAS) P40991 (/TAS) P40991 (/TAS) P40991 (/TAS) |
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
|
4 | P40991 (/HDA) P40991 (/HDA) P40991 (/HDA) P40991 (/HDA) |
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
|
4 | P40991 (/IDA) P40991 (/IDA) P40991 (/IDA) P40991 (/IDA) |
Preribosome, large subunit precursor GO:0030687
A preribosomal complex consisting of 27SA, 27SB, and/or 7S pre-rRNA, 5S rRNA, ribosomal proteins including late-associating large subunit proteins, and associated proteins; a precursor of the eukaryotic cytoplasmic large ribosomal subunit.
|
4 | P40991 (/HDA) P40991 (/HDA) P40991 (/HDA) P40991 (/HDA) |
Preribosome, large subunit precursor GO:0030687
A preribosomal complex consisting of 27SA, 27SB, and/or 7S pre-rRNA, 5S rRNA, ribosomal proteins including late-associating large subunit proteins, and associated proteins; a precursor of the eukaryotic cytoplasmic large ribosomal subunit.
|
4 | P40991 (/IDA) P40991 (/IDA) P40991 (/IDA) P40991 (/IDA) |