The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"Vaccinia Virus protein VP39
".
FunFam 12: tRNA/tmRNA (uracil-C(5))-methyltransferase
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 4 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
TRNA binding GO:0000049
Interacting selectively and non-covalently with transfer RNA.
|
68 |
P23003 (/IDA)
P23003 (/IDA)
P23003 (/IDA)
P23003 (/IDA)
P23003 (/IDA)
P23003 (/IDA)
P23003 (/IDA)
P23003 (/IDA)
P23003 (/IDA)
P23003 (/IDA)
(58 more) |
|
RRNA binding GO:0019843
Interacting selectively and non-covalently with ribosomal RNA.
|
68 |
P23003 (/IDA)
P23003 (/IDA)
P23003 (/IDA)
P23003 (/IDA)
P23003 (/IDA)
P23003 (/IDA)
P23003 (/IDA)
P23003 (/IDA)
P23003 (/IDA)
P23003 (/IDA)
(58 more) |
|
S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity GO:0030697
Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing thymine at position U54 of a transfer RNA. This occurs in most Gram-negative bacteria, some archae, and eukaryotes.
|
68 |
P23003 (/IDA)
P23003 (/IDA)
P23003 (/IDA)
P23003 (/IDA)
P23003 (/IDA)
P23003 (/IDA)
P23003 (/IDA)
P23003 (/IDA)
P23003 (/IDA)
P23003 (/IDA)
(58 more) |
|
S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity GO:0030697
Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing thymine at position U54 of a transfer RNA. This occurs in most Gram-negative bacteria, some archae, and eukaryotes.
|
22 |
Q48DT0 (/ISS)
Q48DT0 (/ISS)
Q48DT0 (/ISS)
Q48DT0 (/ISS)
Q48DT0 (/ISS)
Q48DT0 (/ISS)
Q48DT0 (/ISS)
Q48DT0 (/ISS)
Q48DT0 (/ISS)
Q48DT0 (/ISS)
(12 more) |
There are 2 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
TRNA methylation GO:0030488
The posttranscriptional addition of methyl groups to specific residues in a tRNA molecule.
|
68 |
P23003 (/IMP)
P23003 (/IMP)
P23003 (/IMP)
P23003 (/IMP)
P23003 (/IMP)
P23003 (/IMP)
P23003 (/IMP)
P23003 (/IMP)
P23003 (/IMP)
P23003 (/IMP)
(58 more) |
|
TRNA modification GO:0006400
The covalent alteration of one or more nucleotides within a tRNA molecule to produce a tRNA molecule with a sequence that differs from that coded genetically.
|
7 | Q8CX51 (/ISS) Q9KVJ0 (/ISS) Q9KVJ0 (/ISS) Q9KVJ0 (/ISS) Q9KVJ0 (/ISS) Q9KVJ0 (/ISS) Q9KVJ0 (/ISS) |
There are 1 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
68 |
P23003 (/IDA)
P23003 (/IDA)
P23003 (/IDA)
P23003 (/IDA)
P23003 (/IDA)
P23003 (/IDA)
P23003 (/IDA)
P23003 (/IDA)
P23003 (/IDA)
P23003 (/IDA)
(58 more) |
