The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:

"
N-terminal domain of ligase-like
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 39: Peroxisomal-coenzyme A synthetase

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 4 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Oxalate-CoA ligase activity GO:0050203
Catalysis of the reaction: ATP + CoA + oxalate = AMP + diphosphate + H(+) + oxalyl-CoA.
9 P38137 (/IDA) P38137 (/IDA) P38137 (/IDA) P38137 (/IDA) P38137 (/IDA) P38137 (/IDA) P38137 (/IDA) Q9SMT7 (/IDA) Q9SMT7 (/IDA)
MRNA binding GO:0003729
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
7 P38137 (/IDA) P38137 (/IDA) P38137 (/IDA) P38137 (/IDA) P38137 (/IDA) P38137 (/IDA) P38137 (/IDA)
Oxalate-CoA ligase activity GO:0050203
Catalysis of the reaction: ATP + CoA + oxalate = AMP + diphosphate + H(+) + oxalyl-CoA.
7 P38137 (/IMP) P38137 (/IMP) P38137 (/IMP) P38137 (/IMP) P38137 (/IMP) P38137 (/IMP) P38137 (/IMP)
Acid-thiol ligase activity GO:0016878
Catalysis of the joining of an acid and a thiol via a carbon-sulfur bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.
1 O74976 (/ISM)

There are 8 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Oxalate catabolic process GO:0033611
The chemical reactions and pathways resulting in the breakdown of oxalate, the organic acid ethanedioate.
9 P38137 (/IDA) P38137 (/IDA) P38137 (/IDA) P38137 (/IDA) P38137 (/IDA) P38137 (/IDA) P38137 (/IDA) Q9SMT7 (/IDA) Q9SMT7 (/IDA)
Oxalate catabolic process GO:0033611
The chemical reactions and pathways resulting in the breakdown of oxalate, the organic acid ethanedioate.
7 P38137 (/IMP) P38137 (/IMP) P38137 (/IMP) P38137 (/IMP) P38137 (/IMP) P38137 (/IMP) P38137 (/IMP)
Response to cytokinin GO:0009735
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokinin stimulus.
2 Q9SMT7 (/IDA) Q9SMT7 (/IDA)
Positive regulation of seed germination GO:0010030
Any process that activates or increase the rate of seed germination.
2 Q9SMT7 (/IMP) Q9SMT7 (/IMP)
Seed coat development GO:0010214
The process whose specific outcome is the progression of the seed coat over time, from its formation to the mature structure.
2 Q9SMT7 (/IMP) Q9SMT7 (/IMP)
Response to cadmium ion GO:0046686
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cadmium (Cd) ion stimulus.
2 Q9SMT7 (/IEP) Q9SMT7 (/IEP)
Defense response to fungus GO:0050832
Reactions triggered in response to the presence of a fungus that act to protect the cell or organism.
2 Q9SMT7 (/IMP) Q9SMT7 (/IMP)
Acetyl-CoA metabolic process GO:0006084
The chemical reactions and pathways involving acetyl-CoA, a derivative of coenzyme A in which the sulfhydryl group is acetylated; it is a metabolite derived from several pathways (e.g. glycolysis, fatty acid oxidation, amino-acid catabolism) and is further metabolized by the tricarboxylic acid cycle. It is a key intermediate in lipid and terpenoid biosynthesis.
1 O74976 (/ISM)

There are 11 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
7 P38137 (/HDA) P38137 (/HDA) P38137 (/HDA) P38137 (/HDA) P38137 (/HDA) P38137 (/HDA) P38137 (/HDA)
Peroxisomal membrane GO:0005778
The lipid bilayer surrounding a peroxisome.
7 P38137 (/IDA) P38137 (/IDA) P38137 (/IDA) P38137 (/IDA) P38137 (/IDA) P38137 (/IDA) P38137 (/IDA)
Peroxisomal matrix GO:0005782
The volume contained within the membranes of a peroxisome; in many cells the matrix contains a crystalloid core largely composed of urate oxidase.
7 P38137 (/IDA) P38137 (/IDA) P38137 (/IDA) P38137 (/IDA) P38137 (/IDA) P38137 (/IDA) P38137 (/IDA)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
2 Q9SMT7 (/IDA) Q9SMT7 (/IDA)
Plasmodesma GO:0009506
A fine cytoplasmic channel, found in all higher plants, that connects the cytoplasm of one cell to that of an adjacent cell.
2 Q9SMT7 (/IDA) Q9SMT7 (/IDA)
Chloroplast GO:0009507
A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
2 Q9SMT7 (/IDA) Q9SMT7 (/IDA)
Chloroplast stroma GO:0009570
The space enclosed by the double membrane of a chloroplast but excluding the thylakoid space. It contains DNA, ribosomes and some temporary products of photosynthesis.
2 Q9SMT7 (/IDA) Q9SMT7 (/IDA)
Apoplast GO:0048046
The cell membranes and intracellular regions in a plant are connected through plasmodesmata, and plants may be described as having two major compartments: the living symplast and the non-living apoplast. The apoplast is external to the plasma membrane and includes cell walls, intercellular spaces and the lumen of dead structures such as xylem vessels. Water and solutes pass freely through it.
2 Q9SMT7 (/IDA) Q9SMT7 (/IDA)
Peroxisomal membrane GO:0005778
The lipid bilayer surrounding a peroxisome.
1 O74976 (/ISO)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
1 O74976 (/HDA)
Phagocytic vesicle GO:0045335
A membrane-bounded intracellular vesicle that arises from the ingestion of particulate material by phagocytosis.
1 Q54WL7 (/HDA)
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