The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:

"
N-terminal domain of ligase-like
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
« Back to all FunFams

FunFam 28: Long-chain-fatty-acid--CoA ligase 1

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 9 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Long-chain fatty acid-CoA ligase activity GO:0004467
Catalysis of the reaction: ATP + a long-chain fatty acid + CoA = AMP + diphosphate + an acyl-CoA; a long-chain fatty acid is a fatty acid with a chain length between C13 and C22.
11 P30624 (/IDA) P30624 (/IDA) P30624 (/IDA) P30624 (/IDA) P30624 (/IDA) P30624 (/IDA) P30624 (/IDA) P30624 (/IDA) P39002 (/IDA) P39002 (/IDA)
(1 more)
Long-chain fatty acid-CoA ligase activity GO:0004467
Catalysis of the reaction: ATP + a long-chain fatty acid + CoA = AMP + diphosphate + an acyl-CoA; a long-chain fatty acid is a fatty acid with a chain length between C13 and C22.
11 A0A1D8PU56 (/IGI) A0A1D8PU56 (/IGI) P30624 (/IGI) P30624 (/IGI) P30624 (/IGI) P30624 (/IGI) P30624 (/IGI) P30624 (/IGI) P30624 (/IGI) P30624 (/IGI)
(1 more)
Long-chain fatty acid-CoA ligase activity GO:0004467
Catalysis of the reaction: ATP + a long-chain fatty acid + CoA = AMP + diphosphate + an acyl-CoA; a long-chain fatty acid is a fatty acid with a chain length between C13 and C22.
11 A0A1D8PU56 (/IMP) A0A1D8PU56 (/IMP) P30624 (/IMP) P30624 (/IMP) P30624 (/IMP) P30624 (/IMP) P30624 (/IMP) P30624 (/IMP) P30624 (/IMP) P30624 (/IMP)
(1 more)
Medium-chain fatty acid-CoA ligase activity GO:0031956
Catalysis of the reaction: ATP + a medium-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; a medium-chain fatty acid is any fatty acid with a chain length of between C6 and C12.
8 P30624 (/IDA) P30624 (/IDA) P30624 (/IDA) P30624 (/IDA) P30624 (/IDA) P30624 (/IDA) P30624 (/IDA) P30624 (/IDA)
Very long-chain fatty acid-CoA ligase activity GO:0031957
Catalysis of the reaction: ATP + a very-long-chain fatty acid + CoA = AMP + diphosphate + an acyl-CoA; a very long-chain fatty acid is a fatty acid which has a chain length greater than C22.
2 P39002 (/IDA) P39002 (/IDA)
Myristoyl-CoA ligase activity GO:0090432
Catalysis of the reaction: ATP + myristic acid + CoA = AMP + diphosphate + myristoyl-CoA.
2 O60135 (/IMP) Q9P7D7 (/IMP)
Long-chain fatty acid-CoA ligase activity GO:0004467
Catalysis of the reaction: ATP + a long-chain fatty acid + CoA = AMP + diphosphate + an acyl-CoA; a long-chain fatty acid is a fatty acid with a chain length between C13 and C22.
1 C8V333 (/RCA)
Palmitoyl-CoA ligase activity GO:0090433
Catalysis of the reaction: ATP + palmitic acid + CoA = AMP + diphosphate + palmitoyl-CoA.
1 O60135 (/IMP)
Oleoyl-CoA ligase activity GO:0090434
Catalysis of the reaction: ATP + oleic acid + CoA = AMP + diphosphate + oleoyl-CoA.
1 O60135 (/IMP)

There are 9 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Long-chain fatty-acyl-CoA metabolic process GO:0035336
The chemical reactions and pathways involving long-chain fatty-acyl-CoAs, any derivative of coenzyme A in which the sulfhydryl group is in a thioester linkage with a long-chain fatty-acyl group. Long-chain fatty-acyl-CoAs have chain lengths of C13 or more.
11 O60135 (/IGI) P30624 (/IGI) P30624 (/IGI) P30624 (/IGI) P30624 (/IGI) P30624 (/IGI) P30624 (/IGI) P30624 (/IGI) P30624 (/IGI) P47912 (/IGI)
(1 more)
Long-chain fatty-acyl-CoA metabolic process GO:0035336
The chemical reactions and pathways involving long-chain fatty-acyl-CoAs, any derivative of coenzyme A in which the sulfhydryl group is in a thioester linkage with a long-chain fatty-acyl group. Long-chain fatty-acyl-CoAs have chain lengths of C13 or more.
10 O60135 (/IMP) P30624 (/IMP) P30624 (/IMP) P30624 (/IMP) P30624 (/IMP) P30624 (/IMP) P30624 (/IMP) P30624 (/IMP) P30624 (/IMP) P47912 (/IMP)
Long-chain fatty acid import into cell GO:0044539
The directed movement of a long-chain fatty acid from outside of a cell into a cell. This may occur via transport across the plasma membrane or via endocytosis. A long-chain fatty acid is a fatty acid with a chain length between C13 and C22.
10 A0A1D8PU56 (/IMP) A0A1D8PU56 (/IMP) P30624 (/IMP) P30624 (/IMP) P30624 (/IMP) P30624 (/IMP) P30624 (/IMP) P30624 (/IMP) P30624 (/IMP) P30624 (/IMP)
Long-chain fatty acid import into cell GO:0044539
The directed movement of a long-chain fatty acid from outside of a cell into a cell. This may occur via transport across the plasma membrane or via endocytosis. A long-chain fatty acid is a fatty acid with a chain length between C13 and C22.
9 P30624 (/IGI) P30624 (/IGI) P30624 (/IGI) P30624 (/IGI) P30624 (/IGI) P30624 (/IGI) P30624 (/IGI) P30624 (/IGI) P47912 (/IGI)
Sphingoid long-chain base transport GO:1905329
The directed movement of a sphingoid long-chain base, sometimes referred to as long-chain base, or sphingoid base, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Sphingoid long-chain bases are long-chain aliphatic amines that are the fundamental building blocks of sphingolipids. The main mammalian sphingoid long-chain bases are dihydrosphingosine and sphingosine, while dihydrosphingosine and phytosphingosine are the main sphingoid long-chain bases in yeast.
9 P30624 (/IGI) P30624 (/IGI) P30624 (/IGI) P30624 (/IGI) P30624 (/IGI) P30624 (/IGI) P30624 (/IGI) P30624 (/IGI) P47912 (/IGI)
Sphingoid long-chain base transport GO:1905329
The directed movement of a sphingoid long-chain base, sometimes referred to as long-chain base, or sphingoid base, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Sphingoid long-chain bases are long-chain aliphatic amines that are the fundamental building blocks of sphingolipids. The main mammalian sphingoid long-chain bases are dihydrosphingosine and sphingosine, while dihydrosphingosine and phytosphingosine are the main sphingoid long-chain bases in yeast.
8 P30624 (/IMP) P30624 (/IMP) P30624 (/IMP) P30624 (/IMP) P30624 (/IMP) P30624 (/IMP) P30624 (/IMP) P30624 (/IMP)
Long-chain fatty acid metabolic process GO:0001676
The chemical reactions and pathways involving long-chain fatty acids, A long-chain fatty acid is a fatty acid with a chain length between C13 and C22.
2 P39002 (/IGI) P39002 (/IGI)
N-terminal protein myristoylation GO:0006499
The covalent attachment of a myristoyl group to the N-terminal amino acid residue of a protein.
1 Q9P7D7 (/ISO)
Fatty acid metabolic process GO:0006631
The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis.
1 C8V333 (/RCA)

There are 11 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
10 C8V333 (/IDA) P30624 (/IDA) P30624 (/IDA) P30624 (/IDA) P30624 (/IDA) P30624 (/IDA) P30624 (/IDA) P30624 (/IDA) P30624 (/IDA) P47912 (/IDA)
Endoplasmic reticulum GO:0005783
The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
9 O60135 (/HDA) P30624 (/HDA) P30624 (/HDA) P30624 (/HDA) P30624 (/HDA) P30624 (/HDA) P30624 (/HDA) P30624 (/HDA) P30624 (/HDA)
Lipid droplet GO:0005811
An intracellular non-membrane-bounded organelle comprising a matrix of coalesced lipids surrounded by a phospholipid monolayer. May include associated proteins.
9 P30624 (/IDA) P30624 (/IDA) P30624 (/IDA) P30624 (/IDA) P30624 (/IDA) P30624 (/IDA) P30624 (/IDA) P30624 (/IDA) P47912 (/IDA)
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
8 P30624 (/HDA) P30624 (/HDA) P30624 (/HDA) P30624 (/HDA) P30624 (/HDA) P30624 (/HDA) P30624 (/HDA) P30624 (/HDA)
Mitochondrial outer membrane GO:0005741
The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope.
8 P30624 (/HDA) P30624 (/HDA) P30624 (/HDA) P30624 (/HDA) P30624 (/HDA) P30624 (/HDA) P30624 (/HDA) P30624 (/HDA)
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
8 P30624 (/HDA) P30624 (/HDA) P30624 (/HDA) P30624 (/HDA) P30624 (/HDA) P30624 (/HDA) P30624 (/HDA) P30624 (/HDA)
Fungal-type vacuole membrane GO:0000329
The lipid bilayer surrounding a vacuole, the shape of which correlates with cell cycle phase. The membrane separates its contents from the cytoplasm of the cell. An example of this structure is found in Saccharomyces cerevisiae.
1 Q9P7D7 (/HDA)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
1 P47912 (/HDA)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
1 C8V333 (/IDA)
Golgi apparatus GO:0005794
A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions.
1 Q9P7D7 (/HDA)
Cytoplasmic stress granule GO:0010494
A dense aggregation in the cytosol composed of proteins and RNAs that appear when the cell is under stress.
1 P47912 (/IDA)
CATH-Gene3D is a Global Biodata Core Resource Learn more...