CATH Superfamily 3.40.50.10810

Browse Functional Families

ID	Function Family (FunFam) Name	Total Sequences	Structure?	Structural Representative	PDB Sites?	Alignment Diversity (0-100)
1	chromodomain-helicase-DNA-binding protein 3 isoform X1	998		-	-	74.3
2	ISWI chromatin-remodeling complex ATPase CHR11 isoform A	959		-	-	82.3
3	chromodomain-helicase-DNA-binding protein 8 isoform X4	828		-	-	72.1
4	probable global transcription activator SNF2L2 isoform X1	712		-	-	61.2
5	Photoperiod-independent early flowering 1	708		-	-	92.9
6	Putative DNA helicase INO80	512		-	-	71.6
7	Chromodomain-helicase-DNA-binding protein 2 isoform 1	451	3D	3mwyW03	-	67.6
8	Chromatin structure-remodeling complex subunit snf21	342		-	-	78.3
9	B-TFIID TATA-box-binding protein-associated factor 1	336		-	-	76.0
10	DNA repair and recombination protein RAD54-like	318	3D	1z3iX01	-	88.4
11	Transcriptional regulator ATRX homolog	260		-	-	66.3
12	RNA polymerase-associated protein RapA	258	3D	6bogB04	-	45.4
13	E3 ubiquitin-protein ligase SHPRH isoform X2	221		-	-	92.4
14	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1	216		-	-	89.1
15	lymphoid-specific helicase isoform X1	213		-	-	83.3
16	Chromatin structure-remodeling complex protein SYD	188		-	-	73.1
17	ATP-dependent helicase BRM	168		-	-	71.9
18	Putative DNA excision repair protein ERCC-6	167		-	-	70.4
19	DNA excision repair protein ERCC-6-like 2 isoform X1	139		-	-	93.4
21	DNA repair and recombination protein RAD54	129		-	-	83.9
20	DNA repair and recombination protein RAD54B	129		-	-	87.1
22	Blast:Putative DNA helicase Ino80	124		-	-	72.9
23	helicase-like transcription factor isoform X1	108		-	-	37.0
24	DNA annealing helicase and endonuclease ZRANB3	99		-	-	70.5
25	E3 ubiquitin-protein ligase SHPRH isoform X1	91		-	-	65.6
26	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1	89		-	-	72.6
27	helicase-like transcription factor isoform X3	81		-	-	37.9
29	ERCC excision repair 6-like, spindle assembly checkpoint helicase	75		-	-	77.9
28	Chromatin-remodeling complex ATPase	75		-	-	42.3
30	ATP-dependent DNA helicase DDM1	69		-	-	70.4
31	Helicase, SNF2/RAD54 family	66		-	-	78.9
32	Helicase ARIP4	62		-	-	14.3
33	E1A-binding protein p400 isoform X9	62		-	-	31.4
34	Protein CHROMATIN REMODELING 8	60		-	-	57.8
35	DsDNA-dependent ATPase Rad54b	59		-	-	67.9
36	Chromatin remodelling complex ATPase chain	56		-	-	63.9
37	chromodomain-helicase-DNA-binding protein 1-like isoform X1	52		-	-	79.1
39	DNA repair protein Rhp26/Rad26	45		-	-	74.8
38	Protein CHROMATIN REMODELING 19 isoform A	45		-	-	73.7
40	Switch 2	43		-	-	60.6
41	Chromatin remodeling protein	37		-	-	61.9
42	SNF2 family helicase-like protein	35		-	-	93.8
43	Transcription termination factor 2	33		-	-	73.2
45	Putative chromatin-remodeling complex ATPase chain	32		-	-	53.8
44	Chromatin remodeling factor18	32		-	-	84.2
47	DEAD/DEAH box helicase	28		-	-	82.0
46	Putative SNF2 family helicase/ATPase	28		-	-	33.6
48	SNF2 helicase, putative	26		-	-	11.8
49	DNA helicase	24		-	-	13.3
50	Snf2-related CBP activator	23		-	-	6.0
51	Helicase SWR1	21		-	-	79.5
53	SNF2 family helicase/ATPase, putative	21		-	-	72.7
52	DNA helicase	21		-	-	6.9
54	Helicase, Snf2 family	21		-	-	83.3
55	Protein CHROMATIN REMODELING 24	20		-	-	75.7
58	RDH54p DNA-dependent ATPase	19		-	-	72.5
57	Snf2/Rad54 family helicase	19		-	-	73.7
56	DNA repair protein RAD5	19		-	-	12.1
59	SNF2 family helicase/ATPase, putative	19		-	-	79.6
62	DNA repair protein rhp16	18		-	-	8.6
61	DNA repair protein rhp16	18		-	-	9.7
60	DNA repair protein RAD5	18		-	-	4.2
63	Chromosome 12, whole genome shotgun sequence	18		-	-	54.9
64	SWI/SNF family DNA-dependent ATPase Ris1, putative	17		-	-	78.0
67	ATP-dependent DNA helicase	15		-	-	43.2
68	SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein	15		-	-	80.4
65	SNF2 DNA repair protein, putative	15		-	-	84.4
66	Uncharacterized protein Fragment	15		-	-	76.3
71	SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein	14		-	-	75.9
69	DNA helicase	14		-	-	0.0
70	DNA helicase, putative	14		-	-	8.7
72	Bifunctional helicase and thymine dioxygenase JBP2	13		-	-	73.8
73	DNA helicase, putative	13		-	-	84.1
74	DNA dependent ATPase, putative	13		-	-	75.4
76	ATP-dependent helicase ULS1	12		-	-	34.4
91	DNA helicase, SNF2/RAD54 family	12	3D	1z6aA01	-	60.4
75	Protein CHROMATIN REMODELING 5	12		-	-	14.0
77	Putative DNA repair protein	11		-	-	58.5
78	Helicase domain containing protein	11		-	-	82.8
79	SWF/SNF family helicase	11		-	-	19.2
80	DNA repair protein RAD16	11		-	-	28.1
84	Protein CHROMATIN REMODELING 19	10		-	-	55.3
82	SNF2 domain-containing protein	10		-	-	24.9
85	Transcription regulatory protein SNF2	10		-	-	85.0
83	Helicase putative	10		-	-	75.6
81	DNA repair protein, putative	10		-	-	34.3
87	Chromatin remodeling 38	9		-	-	19.5
90	Similarity to HELICASE MOT1	9		-	-	85.1
89	DNA repair protein RAD5B	9		-	-	44.6
86	CHD3-type chromatin-remodeling factor PICKLE	9		-	-	6.1
88	Irc20p	9		-	-	35.5
94	DNA excision repair protein ERCC-6	8		-	-	86.8
93	DNA repair protein rhp16, putative	8		-	-	5.2
92	Protein CHROMATIN REMODELING 4	8		-	-	8.7
101	SWI/SNF-related, matrix-associated, actin-dependent regulator of	7		-	-	71.3
96	Helicase, putative	7		-	-	11.0
98	Uncharacterized protein, isoform A	7		-	-	12.6
100	SNF2 family protein	7		-	-	0.5
99	Rad5p	7		-	-	3.4
102	Chromosome organization and biogenesis-related protein, putative	7		-	-	41.5
104	Protein CHROMATIN REMODELING 20	7		-	-	10.6
103	DNA repair and recombination protein RAD54B, putative	7		-	-	6.2
97	Uncharacterized protein, isoform A	7		-	-	13.1
95	Helicase, putative	7		-	-	9.0
106	Probable global transcription activator SNF2L2	7		-	-	53.2
105	DNA repair protein, putative	7		-	-	3.0
113	Putative snf2 family helicase atpase protein	6		-	-	10.9
107	SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein	6		-	-	47.7
116	SNF2 family helicase, putative	6		-	-	83.5
109	SNF2 domain-containing protein CLASSY 4	6		-	-	39.9
110	Putative SNF2 family helicase	6		-	-	4.8
112	SuUR	6		-	-	8.0
108	Helicase superfamily, c-terminal domain protein	6		-	-	8.7
114	DNA repair protein rad8	6		-	-	78.3
115	Nucleosome remodeling complex ATPase subunit Snf2h	6		-	-	66.5
111	Unplaced genomic scaffold supercont1.14, whole genome shotgun sequence	6		-	-	4.8
118	Defense against restriction protein B	5		-	-	14.4
124	RAD54 like	5		-	-	23.6
119	CSB Cockayne Syndrome B	5		-	-	56.7
120	SNF2 family N-terminal domain/Helicase conserved C-terminal domain containing protein, putative	5		-	-	5.1
122	Uncharacterized protein	5		-	-	6.1
121	DNA repair and recombination protein RAD54B	5		-	-	8.0
117	Defense against restriction protein B	5		-	-	13.1
123	Uncharacterized protein	5		-	-	19.0
127	Helicase SNF2	4		-	-	6.8
129	SWF/SNF family helicase	4		-	-	4.5
126	DNA helicase	4		-	-	12.6
128	SNF2_family_N-terminal_domain /Helicase_conserved_C-terminal_domain_containing_protein_-_putative	4		-	-	7.4
130	WGS project CABT00000000 data, contig 2.20	4		-	-	4.0
131	AGAP010699-PA	4		-	-	66.3
132	Excision repair cross-complementation group 6-like 2	4		-	-	62.1
125	Helicase, Snf2 family protein	4		-	-	71.2
139	ATP-dependent helicase, putative	3		-	-	8.1
135	Uncharacterized protein	3		-	-	68.4
145	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1	3		-	-	25.9
136	SNF2 family N-terminal domain-domain-containing protein	3		-	-	0.0
144	SNF2 family N-terminal domain-domain-containing protein	3		-	-	0.0
138	Protein CHROMATIN REMODELING 35	3		-	-	0.4
137	Helicase-like protein	3		-	-	6.7
142	RAD54B DNA helicase splice variant	3		-	-	5.6
140	DNA repair and recombination protein Rhp26p	3		-	-	6.7
143	Eukaryotic translation initiation factor 3 subunit E	3		-	-	8.5
133	SNF2 histone linker PHD RING helicase	3		-	-	29.8
141	Uncharacterized protein	3		-	-	1.2
134	Uncharacterized protein	3		-	-	22.0
146	RAD54L isoform 5	3		-	-	25.2
153	Helicase, putative	2		-	-	0.0
168	DNA repair and recombination protein RAD54B, putative	2		-	-	3.5
178	Helicase superfamily, c-terminal domain protein	2		-	-	1.0
160	Helicase	2		-	-	0.0
180	Snf2 family helicase	2		-	-	0.0
152	Protein CBG00336	2		-	-	41.1
189	SNF2 superfamily protein	2		-	-	35.2
177	SNF2 superfamily protein	2		-	-	0.6
171	Uncharacterized protein	2		-	-	17.0
161	SNF2 family N-terminal domain-domain-containing protein	2		-	-	0.0
151	Snf2-related CREBBP activator protein	2		-	-	46.2
191	Predicted protein	2		-	-	37.9
187	Predicted protein	2		-	-	37.2
176	SNF2 superfamily protein	2		-	-	0.9
170	Predicted protein	2		-	-	35.3
182	p-loop containing nucleoside triphosphate hydrolase protein	2		-	-	0.0
167	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily-related, putative	2		-	-	0.0
192	Chromodomain helicase DNA-binding protein 3	2		-	-	38.5
150	Helicase, putative	2		-	-	41.3
155	Uncharacterized protein	2		-	-	14.1
163	Putative DNA excision/repair protein SNF2	2		-	-	6.0
175	DNA excision repair protein ERCC-6	2		-	-	0.0
184	SWI/SNF family DNA-dependent ATPase, putative	2		-	-	33.3
181	ATP-dependent helicase HepA	2		-	-	0.0
154	SNF2 histone linker PHD RING helicase	2		-	-	0.9
159	Predicted protein	2		-	-	28.6
162	Putative snf2 family dna-dependent atpase domain-containing protein	2		-	-	1.1
174	Uncharacterized protein, isoform E	2		-	-	0.0
188	Uncharacterized protein	2		-	-	28.3
158	Uncharacterized protein	2		-	-	19.5
183	Helicase superfamily, c-terminal domain protein	2		-	-	3.9
169	Predicted protein	2		-	-	33.6
190	Excision repair cross-complementation group 6-like	2		-	-	36.8
148	CHD gene family protein containing chromodomain, helicase domain, and DNA-binding domain	2		-	-	37.3
157	Putative SNF2 family helicase	2		-	-	0.0
165	Excision repair cross-complementing rodent repair deficiency, complementation group 6 variant	2		-	-	9.5
186	SWF/SNF family helicase	2		-	-	33.1
147	RAD54 like	2		-	-	27.1
172	Uncharacterized protein	2		-	-	0.0
179	p-loop containing nucleoside triphosphate hydrolase protein	2		-	-	0.0
149	Snf2-related CREBBP activator protein	2		-	-	38.6
173	Uncharacterized protein, isoform E	2		-	-	0.0
166	Uncharacterized protein	2		-	-	10.8
156	Uncharacterized protein	2		-	-	0.0
185	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1	2		-	-	31.8
164	Uncharacterized protein	2		-	-	0.0
206	Predicted protein	1		-	-	0.0
194	Uncharacterized protein	1		-	-	0.0
220	AEL297Wp	1		-	-	0.0
226	Uncharacterized protein	1		-	-	0.0
211	SWI/SNF chromatin remodeling complex component	1		-	-	0.0
236	Predicted protein	1		-	-	0.0
218	Uncharacterized protein	1		-	-	0.0
234	Uncharacterized protein	1		-	-	0.0
193	Uncharacterized protein	1		-	-	0.0
244	SNF2 family N-terminal domain containing protein	1		-	-	0.0
246	Uncharacterized protein	1		-	-	0.0
221	E3 ubiquitin-protein ligase SHPRH-like Protein	1		-	-	0.0
260	Chromosome 10, whole genome shotgun sequence	1		-	-	0.0
237	Uncharacterized protein	1		-	-	0.0
254	Uncharacterized protein	1		-	-	0.0
205	Uncharacterized protein	1		-	-	0.0
235	Protein CHROMATIN REMODELING 24	1		-	-	0.0
213	Uncharacterized protein	1		-	-	0.0
265	Uncharacterized protein	1		-	-	0.0
200	Uncharacterized protein	1		-	-	0.0
272	Predicted protein	1		-	-	0.0
275	Uncharacterized protein	1		-	-	0.0
197	Adenosinetriphosphatase	1		-	-	0.0
224	SNF2 histone linker PHD RING helicase	1		-	-	0.0
262	Meiotic recombination protein rdh54	1		-	-	0.0
212	Uncharacterized protein	1		-	-	0.0
251	Uncharacterized protein	1		-	-	0.0
279	Uncharacterized protein	1		-	-	0.0
256	Uncharacterized protein	1		-	-	0.0
227	ERCC excision repair 6, chromatin remodeling factor	1		-	-	0.0
255	Snf2 histone linker PHD ring helicase, putative	1		-	-	0.0
264	Uncharacterized protein	1		-	-	0.0
232	Type III restriction enzyme, res subunit family protein	1		-	-	0.0
225	DNA repair protein RAD5A	1		-	-	0.0
207	Uncharacterized protein	1		-	-	0.0
263	Predicted protein	1		-	-	0.0
274	Uncharacterized protein	1		-	-	0.0
250	Uncharacterized protein	1		-	-	0.0
215	Protein CBG05712	1		-	-	0.0
278	Uncharacterized protein	1		-	-	0.0
245	Predicted protein	1		-	-	0.0
267	Uncharacterized protein	1		-	-	0.0
257	Uncharacterized protein	1		-	-	0.0
276	Uncharacterized protein	1		-	-	0.0
233	Swi/snf family helicase_2	1		-	-	0.0
259	Predicted protein	1		-	-	0.0
208	Uncharacterized protein	1		-	-	0.0
199	Protein CBR-RAD-54	1		-	-	0.0
241	Uncharacterized protein	1		-	-	0.0
198	DNA repair protein, putative	1		-	-	0.0
273	Uncharacterized protein	1		-	-	0.0
249	Uncharacterized protein	1		-	-	0.0
202	Uncharacterized protein	1		-	-	0.0
270	Uncharacterized protein	1		-	-	0.0
195	E3 ubiquitin-protein ligase SHPRH-like Protein	1		-	-	0.0
240	Uncharacterized protein	1		-	-	0.0
230	Uncharacterized ATP-dependent helicase MG018	1		-	-	0.0
201	SNF2 family DNA-dependent ATPase	1		-	-	0.0
266	Uncharacterized ATP-dependent helicase C17A2.12	1		-	-	0.0
214	SWI/SNF chromatin remodeling complex component	1		-	-	0.0
229	Type III restriction enzyme, res subunit family protein	1		-	-	0.0
222	Protein CBR-RAD-54	1		-	-	0.0
217	Uncharacterized protein	1		-	-	0.0
239	Uncharacterized protein	1		-	-	0.0
269	Uncharacterized protein	1		-	-	0.0
243	ERCC excision repair 6, chromatin-remodeling factor	1		-	-	0.0
231	Uncharacterized protein	1		-	-	0.0
203	Uncharacterized protein	1		-	-	0.0
261	Uncharacterized protein	1		-	-	0.0
247	DNA repair protein-like protein	1		-	-	0.0
204	Uncharacterized protein	1		-	-	0.0
228	SNF2 DNA repair protein, putative	1		-	-	0.0
268	Uncharacterized protein	1		-	-	0.0
223	Uncharacterized protein	1		-	-	0.0
238	Predicted protein	1		-	-	0.0
253	Uncharacterized protein	1		-	-	0.0
209	DNA repair protein, putative	1		-	-	0.0
216	Uncharacterized protein	1		-	-	0.0
277	Uncharacterized protein	1		-	-	0.0
210	Uncharacterized protein	1		-	-	0.0
258	Excision repair cross-complementing rodent repair deficiency, complementation group 6	1		-	-	0.0
252	Predicted protein	1		-	-	0.0
271	SNF2/RAD54 family protein	1		-	-	0.0
219	Uncharacterized protein	1		-	-	0.0
248	Predicted protein	1		-	-	0.0
196	Predicted protein	1		-	-	0.0
242	Uncharacterized protein	1		-	-	0.0