The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:

"
Creatinase/prolidase N-terminal domain
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
« Back to all FunFams

FunFam 5: SPT16 homolog, facilitates chromatin-remodeling su...

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 2 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
13 Q9W603 (/IPI) Q9W603 (/IPI) Q9Y5B9 (/IPI) Q9Y5B9 (/IPI) Q9Y5B9 (/IPI) Q9Y5B9 (/IPI) Q9Y5B9 (/IPI) Q9Y5B9 (/IPI) Q9Y5B9 (/IPI) Q9Y5B9 (/IPI)
(3 more)
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
11 Q9Y5B9 (/HDA) Q9Y5B9 (/HDA) Q9Y5B9 (/HDA) Q9Y5B9 (/HDA) Q9Y5B9 (/HDA) Q9Y5B9 (/HDA) Q9Y5B9 (/HDA) Q9Y5B9 (/HDA) Q9Y5B9 (/HDA) Q9Y5B9 (/HDA)
(1 more)

There are 5 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Nucleosome disassembly GO:0006337
The controlled breakdown of nucleosomes, the beadlike structural units of eukaryotic chromatin composed of histones and DNA.
11 Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS)
(1 more)
Transcription by RNA polymerase II GO:0006366
The synthesis of RNA from a DNA template by RNA polymerase II (RNAP II), originating at an RNA polymerase II promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).
11 Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS)
(1 more)
Transcription elongation from RNA polymerase II promoter GO:0006368
The extension of an RNA molecule after transcription initiation and promoter clearance at an RNA polymerase II promoter by the addition of ribonucleotides catalyzed by RNA polymerase II.
11 Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS)
(1 more)
Positive regulation of DNA-templated transcription, elongation GO:0032786
Any process that activates or increases the frequency, rate or extent of transcription elongation, the extension of an RNA molecule after transcription initiation and promoter clearance by the addition of ribonucleotides catalyzed by a DNA-dependent RNA polymerase.
11 Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS)
(1 more)
Regulation of signal transduction by p53 class mediator GO:1901796
Any process that modulates the frequency, rate or extent of signal transduction by p53 class mediator.
11 Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS)
(1 more)

There are 3 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
11 Q9Y5B9 (/IDA) Q9Y5B9 (/IDA) Q9Y5B9 (/IDA) Q9Y5B9 (/IDA) Q9Y5B9 (/IDA) Q9Y5B9 (/IDA) Q9Y5B9 (/IDA) Q9Y5B9 (/IDA) Q9Y5B9 (/IDA) Q9Y5B9 (/IDA)
(1 more)
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
11 Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS) Q9Y5B9 (/TAS)
(1 more)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
1 Q920B9 (/ISO)
CATH-Gene3D is a Global Biodata Core Resource Learn more...