The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"Glutaredoxin
".
FunFam 142: Elongation factor 1 gamma
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 8 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Guanyl-nucleotide exchange factor activity GO:0005085
Stimulates the exchange of guanyl nucleotides associated with a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase.
|
14 |
P29547 (/IDA)
P29547 (/IDA)
P29547 (/IDA)
P29547 (/IDA)
P29547 (/IDA)
P29547 (/IDA)
P29547 (/IDA)
P29547 (/IDA)
P29547 (/IDA)
P29547 (/IDA)
(4 more) |
Core promoter binding GO:0001047
Interacting selectively and non-covalently with the regulatory region composed of the transcription start site and binding sites for the basal transcription machinery. Binding may occur as a sequence specific interaction or as an interaction observed only once a factor has been recruited to the DNA by other factors.
|
10 | P29547 (/IDA) P29547 (/IDA) P29547 (/IDA) P29547 (/IDA) P29547 (/IDA) P29547 (/IDA) P29547 (/IDA) P29547 (/IDA) P29547 (/IDA) P29547 (/IDA) |
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
|
10 | P29547 (/IMP) P29547 (/IMP) P29547 (/IMP) P29547 (/IMP) P29547 (/IMP) P29547 (/IMP) P29547 (/IMP) P29547 (/IMP) P29547 (/IMP) P29547 (/IMP) |
Calcium ion binding GO:0005509
Interacting selectively and non-covalently with calcium ions (Ca2+).
|
10 | P29547 (/IDA) P29547 (/IDA) P29547 (/IDA) P29547 (/IDA) P29547 (/IDA) P29547 (/IDA) P29547 (/IDA) P29547 (/IDA) P29547 (/IDA) P29547 (/IDA) |
Phospholipid binding GO:0005543
Interacting selectively and non-covalently with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester.
|
10 | P29547 (/IDA) P29547 (/IDA) P29547 (/IDA) P29547 (/IDA) P29547 (/IDA) P29547 (/IDA) P29547 (/IDA) P29547 (/IDA) P29547 (/IDA) P29547 (/IDA) |
Translation elongation factor activity GO:0003746
Functions in chain elongation during polypeptide synthesis at the ribosome.
|
4 | P36008 (/TAS) P36008 (/TAS) P36008 (/TAS) P36008 (/TAS) |
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
4 | P36008 (/IPI) P36008 (/IPI) P36008 (/IPI) P36008 (/IPI) |
Translation elongation factor activity GO:0003746
Functions in chain elongation during polypeptide synthesis at the ribosome.
|
1 | P40921 (/ISO) |
There are 7 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Translational elongation GO:0006414
The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis.
|
14 |
P29547 (/IDA)
P29547 (/IDA)
P29547 (/IDA)
P29547 (/IDA)
P29547 (/IDA)
P29547 (/IDA)
P29547 (/IDA)
P29547 (/IDA)
P29547 (/IDA)
P29547 (/IDA)
(4 more) |
Regulation of translational termination GO:0006449
Any process that modulates the frequency, rate or extent of translational termination.
|
10 | P29547 (/IGI) P29547 (/IGI) P29547 (/IGI) P29547 (/IGI) P29547 (/IGI) P29547 (/IGI) P29547 (/IGI) P29547 (/IGI) P29547 (/IGI) P29547 (/IGI) |
Ribosome biogenesis GO:0042254
A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits; includes transport to the sites of protein synthesis.
|
10 | P29547 (/IGI) P29547 (/IGI) P29547 (/IGI) P29547 (/IGI) P29547 (/IGI) P29547 (/IGI) P29547 (/IGI) P29547 (/IGI) P29547 (/IGI) P29547 (/IGI) |
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
|
10 | P29547 (/IMP) P29547 (/IMP) P29547 (/IMP) P29547 (/IMP) P29547 (/IMP) P29547 (/IMP) P29547 (/IMP) P29547 (/IMP) P29547 (/IMP) P29547 (/IMP) |
Secondary metabolic process GO:0019748
The chemical reactions and pathways resulting in many of the chemical changes of compounds that are not necessarily required for growth and maintenance of cells, and are often unique to a taxon. In multicellular organisms secondary metabolism is generally carried out in specific cell types, and may be useful for the organism as a whole. In unicellular organisms, secondary metabolism is often used for the production of antibiotics or for the utilization and acquisition of unusual nutrients.
|
2 | Q5BCY5 (/IEP) Q5BCY5 (/IEP) |
Secondary metabolic process GO:0019748
The chemical reactions and pathways resulting in many of the chemical changes of compounds that are not necessarily required for growth and maintenance of cells, and are often unique to a taxon. In multicellular organisms secondary metabolism is generally carried out in specific cell types, and may be useful for the organism as a whole. In unicellular organisms, secondary metabolism is often used for the production of antibiotics or for the utilization and acquisition of unusual nutrients.
|
2 | Q5BCY5 (/IGC) Q5BCY5 (/IGC) |
Cytoplasmic translational elongation GO:0002182
The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis in the cytoplasm.
|
1 | P40921 (/IDA) |
There are 7 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Cytoplasmic stress granule GO:0010494
A dense aggregation in the cytosol composed of proteins and RNAs that appear when the cell is under stress.
|
14 |
P29547 (/IDA)
P29547 (/IDA)
P29547 (/IDA)
P29547 (/IDA)
P29547 (/IDA)
P29547 (/IDA)
P29547 (/IDA)
P29547 (/IDA)
P29547 (/IDA)
P29547 (/IDA)
(4 more) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
10 | P29547 (/IDA) P29547 (/IDA) P29547 (/IDA) P29547 (/IDA) P29547 (/IDA) P29547 (/IDA) P29547 (/IDA) P29547 (/IDA) P29547 (/IDA) P29547 (/IDA) |
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
|
4 | P36008 (/HDA) P36008 (/HDA) P36008 (/HDA) P36008 (/HDA) |
Ribosome GO:0005840
An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
|
4 | P36008 (/TAS) P36008 (/TAS) P36008 (/TAS) P36008 (/TAS) |
Eukaryotic translation elongation factor 1 complex GO:0005853
A multisubunit nucleotide exchange complex that binds GTP and aminoacyl-tRNAs, and catalyzes their codon-dependent placement at the A-site of the ribosome. In humans, the complex is composed of four subunits, alpha, beta, delta and gamma.
|
4 | P36008 (/ISS) P36008 (/ISS) P36008 (/ISS) P36008 (/ISS) |
Extracellular region GO:0005576
The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
|
2 | Q5AYR7 (/IDA) Q5AYR7 (/IDA) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
1 | P40921 (/HDA) |