The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 3: HTH-type transcriptional activator AaeR

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 0 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.

There are 8 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Transcription, DNA-templated GO:0006351
The cellular synthesis of RNA on a template of DNA.
131 P67662 (/EXP) P67662 (/EXP) P67662 (/EXP) P67662 (/EXP) P67662 (/EXP) P67662 (/EXP) P67662 (/EXP) P67662 (/EXP) P67662 (/EXP) P67662 (/EXP)
(121 more)
Transcription, DNA-templated GO:0006351
The cellular synthesis of RNA on a template of DNA.
131 P67662 (/IMP) P67662 (/IMP) P67662 (/IMP) P67662 (/IMP) P67662 (/IMP) P67662 (/IMP) P67662 (/IMP) P67662 (/IMP) P67662 (/IMP) P67662 (/IMP)
(121 more)
Transcription, DNA-templated GO:0006351
The cellular synthesis of RNA on a template of DNA.
131 P67662 (/ISS) P67662 (/ISS) P67662 (/ISS) P67662 (/ISS) P67662 (/ISS) P67662 (/ISS) P67662 (/ISS) P67662 (/ISS) P67662 (/ISS) P67662 (/ISS)
(121 more)
Transcription, DNA-templated GO:0006351
The cellular synthesis of RNA on a template of DNA.
131 P67662 (/RCA) P67662 (/RCA) P67662 (/RCA) P67662 (/RCA) P67662 (/RCA) P67662 (/RCA) P67662 (/RCA) P67662 (/RCA) P67662 (/RCA) P67662 (/RCA)
(121 more)
DNA-templated transcription, initiation GO:0006352
Any process involved in the assembly of the RNA polymerase preinitiation complex (PIC) at the core promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter. The initiation phase includes PIC assembly and the formation of the first few bonds in the RNA chain, including abortive initiation, which occurs when the first few nucleotides are repeatedly synthesized and then released. The initiation phase ends just before and does not include promoter clearance, or release, which is the transition between the initiation and elongation phases of transcription.
131 P67662 (/IMP) P67662 (/IMP) P67662 (/IMP) P67662 (/IMP) P67662 (/IMP) P67662 (/IMP) P67662 (/IMP) P67662 (/IMP) P67662 (/IMP) P67662 (/IMP)
(121 more)
Regulation of transcription, DNA-templated GO:0006355
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
131 P67662 (/IMP) P67662 (/IMP) P67662 (/IMP) P67662 (/IMP) P67662 (/IMP) P67662 (/IMP) P67662 (/IMP) P67662 (/IMP) P67662 (/IMP) P67662 (/IMP)
(121 more)
Positive regulation of transcription, DNA-templated GO:0045893
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
131 P67662 (/IMP) P67662 (/IMP) P67662 (/IMP) P67662 (/IMP) P67662 (/IMP) P67662 (/IMP) P67662 (/IMP) P67662 (/IMP) P67662 (/IMP) P67662 (/IMP)
(121 more)
Positive regulation of transcription, DNA-templated GO:0045893
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
131 P67662 (/ISS) P67662 (/ISS) P67662 (/ISS) P67662 (/ISS) P67662 (/ISS) P67662 (/ISS) P67662 (/ISS) P67662 (/ISS) P67662 (/ISS) P67662 (/ISS)
(121 more)

There are 0 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
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