CATH Superfamily 3.30.720.210
The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.
FunFam 2: ATP-dependent zinc metalloprotease FTSH chloroplas...
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 4 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
ATP-dependent peptidase activity GO:0004176
Catalysis of the reaction: ATP + H2O = ADP + phosphate, to drive the hydrolysis of peptide bonds.
|
4 | F4K9Q6 (/ISS) O80860 (/ISS) O80860 (/ISS) Q8W585 (/ISS) |
|
Metallopeptidase activity GO:0008237
Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
|
2 | O80860 (/ISS) O80860 (/ISS) |
|
Peptidase activity GO:0008233
Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
|
1 | F4K9Q6 (/IMP) |
|
Zinc ion binding GO:0008270
Interacting selectively and non-covalently with zinc (Zn) ions.
|
1 | F4K9Q6 (/ISS) |
There are 10 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
PSII associated light-harvesting complex II catabolic process GO:0010304
The chemical reactions and pathways resulting in the breakdown of one or more components of the light-harvesting complex of photosystem II.
|
3 | O80860 (/TAS) O80860 (/TAS) Q8W585 (/TAS) |
|
Chloroplast organization GO:0009658
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the chloroplast.
|
2 | O80860 (/IGI) O80860 (/IGI) |
|
Response to cytokinin GO:0009735
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokinin stimulus.
|
2 | O80860 (/IDA) O80860 (/IDA) |
|
Thylakoid membrane organization GO:0010027
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the thylakoid membrane.
|
2 | O80860 (/IMP) O80860 (/IMP) |
|
Photoinhibition GO:0010205
The mechanism by which high light intensity inhibits photosynthesis through inactivation of the D1 protein of photosystem II.
|
2 | O80860 (/IMP) O80860 (/IMP) |
|
Photosystem II repair GO:0010206
Proteolysis of the damaged D1 protein and re-assembly of a new D1 subunit in the photosystem II following photoinhibition.
|
2 | O80860 (/IMP) O80860 (/IMP) |
|
Protein catabolic process GO:0030163
The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds.
|
2 | O80860 (/IDA) O80860 (/IDA) |
|
Photosystem I assembly GO:0048564
The aggregation, arrangement and bonding together of a set of components to form a photosystem I complex on the thylakoid membrane.
|
2 | O80860 (/IMP) O80860 (/IMP) |
|
Reactive oxygen species metabolic process GO:0072593
The chemical reactions and pathways involving a reactive oxygen species, any molecules or ions formed by the incomplete one-electron reduction of oxygen. They contribute to the microbicidal activity of phagocytes, regulation of signal transduction and gene expression, and the oxidative damage to biopolymers.
|
2 | O80860 (/IDA) O80860 (/IDA) |
|
PSII associated light-harvesting complex II catabolic process GO:0010304
The chemical reactions and pathways resulting in the breakdown of one or more components of the light-harvesting complex of photosystem II.
|
1 | F4K9Q6 (/IEP) |
There are 7 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Chloroplast GO:0009507
A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
|
4 | F4K9Q6 (/IDA) O80860 (/IDA) O80860 (/IDA) Q8W585 (/IDA) |
|
Chloroplast thylakoid GO:0009534
Sac-like membranous structures (cisternae) in a chloroplast combined into stacks (grana) and present singly in the stroma (stroma thylakoids or frets) as interconnections between grana. An example of this component is found in Arabidopsis thaliana.
|
3 | O80860 (/IDA) O80860 (/IDA) Q8W585 (/IDA) |
|
Chloroplast thylakoid membrane GO:0009535
The pigmented membrane of a chloroplast thylakoid. An example of this component is found in Arabidopsis thaliana.
|
3 | O80860 (/IDA) O80860 (/IDA) Q8W585 (/IDA) |
|
Thylakoid GO:0009579
A membranous cellular structure that bears the photosynthetic pigments in plants, algae, and cyanobacteria. In cyanobacteria thylakoids are of various shapes and are attached to, or continuous with, the plasma membrane. In eukaryotes they are flattened, membrane-bounded disk-like structures located in the chloroplasts; in the chloroplasts of higher plants the thylakoids form dense stacks called grana. Isolated thylakoid preparations can carry out photosynthetic electron transport and the associated phosphorylation.
|
3 | O80860 (/IDA) O80860 (/IDA) Q8W585 (/IDA) |
|
Chloroplast envelope GO:0009941
The double lipid bilayer enclosing the chloroplast and separating its contents from the rest of the cytoplasm; includes the intermembrane space.
|
3 | O80860 (/IDA) O80860 (/IDA) Q8W585 (/IDA) |
|
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
|
3 | O80860 (/IDA) O80860 (/IDA) Q8W585 (/IDA) |
|
Thylakoid lumen GO:0031977
The volume enclosed by a thylakoid membrane.
|
2 | O80860 (/IDA) O80860 (/IDA) |
