The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
« Back to all FunFams

FunFam 1: N-acetyldiaminopimelate deacetylase

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 9 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
N-acetyldiaminopimelate deacetylase activity GO:0050118
Catalysis of the reaction: N-acetyl-LL-2,6-diaminopimelate + H(2)O = LL-2,6-diaminopimelate + acetate.
10 D5E0A1 (/IDA) D5E0A1 (/IDA) D5E0A1 (/IDA) D5E0A1 (/IDA) D5E0A1 (/IDA) O34916 (/IDA) O34916 (/IDA) O34916 (/IDA) O34916 (/IDA) O34916 (/IDA)
IAA-Ala conjugate hydrolase activity GO:0010179
Catalysis of the reaction: indole-3-acetyl-alanine + H2O = indole-3-acetate + L-alanine.
4 O04373 (/IDA) O04373 (/IDA) P54970 (/IDA) P54970 (/IDA)
Aminoacylase activity GO:0004046
Catalysis of the reaction: an N-acyl-L-amino acid + H2O = a carboxylate + an L-amino acid.
2 Q81T95 (/ISS) Q81T95 (/ISS)
IAA-amino acid conjugate hydrolase activity GO:0010178
Catalysis of the cleavage of the amide bond between IAA (auxin) and the conjugated amino acid.
2 P54970 (/IDA) P54970 (/IDA)
Jasmonyl-Ile conjugate hydrolase activity GO:1990206
Catalysis of the reaction: jasmonyl-Ile + H2O = jasmonic acid + L-isoleucine.
2 Q8VYX0 (/IMP) Q8VYX0 (/IMP)
IAA-amino acid conjugate hydrolase activity GO:0010178
Catalysis of the cleavage of the amide bond between IAA (auxin) and the conjugated amino acid.
1 Q9SWX9 (/ISS)
IAA-Phe conjugate hydrolase activity GO:0010210
Catalysis of the reaction: indole-3-acetyl-phenylalanine + H2O = indole-3-acetate + phenylalanine.
1 P54968 (/IDA)
IAA-Leu conjugate hydrolase activity GO:0010211
Catalysis of the reaction: indole-3-acetyl-leucine + H2O = indole-3-acetate + L-leucine.
1 P54968 (/IDA)
Hippurate hydrolase activity GO:0047980
Catalysis of the reaction: N-benzoylglycine + H(2)O = benzoate + glycine.
1 Q5LU44 (/ISS)

There are 11 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Diaminopimelate biosynthetic process GO:0019877
The chemical reactions and pathways resulting in the formation of diaminopimelate, both as an intermediate in lysine biosynthesis and as a component (as meso-diaminopimelate) of the peptidoglycan of Gram-negative bacterial cell walls.
10 D5E0A1 (/IDA) D5E0A1 (/IDA) D5E0A1 (/IDA) D5E0A1 (/IDA) D5E0A1 (/IDA) O34916 (/IDA) O34916 (/IDA) O34916 (/IDA) O34916 (/IDA) O34916 (/IDA)
Lysine biosynthetic process via diaminopimelate GO:0009089
The chemical reactions and pathways resulting in the formation of lysine, via the intermediate diaminopimelate.
5 D5E0A1 (/IDA) D5E0A1 (/IDA) D5E0A1 (/IDA) D5E0A1 (/IDA) D5E0A1 (/IDA)
Lysine biosynthetic process via diaminopimelate GO:0009089
The chemical reactions and pathways resulting in the formation of lysine, via the intermediate diaminopimelate.
5 O34916 (/ISS) O34916 (/ISS) O34916 (/ISS) O34916 (/ISS) O34916 (/ISS)
Regulation of systemic acquired resistance GO:0010112
Any process that modulates the frequency, rate or extent of systemic acquired resistance.
3 Q8VYX0 (/IEP) Q8VYX0 (/IEP) Q9SWX9 (/IEP)
Proteolysis GO:0006508
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
2 Q81T95 (/ISS) Q81T95 (/ISS)
Response to wounding GO:0009611
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism.
2 O04373 (/IEP) O04373 (/IEP)
Jasmonic acid metabolic process GO:0009694
The chemical reactions and pathways involving jasmonic acid, a fatty acid derivative with the formula (1R-(1 alpha, 2 beta(Z)))-3-oxo-2-(2-pentenyl)cyclopentaneacetic acid.
2 Q8VYX0 (/IMP) Q8VYX0 (/IMP)
Response to jasmonic acid GO:0009753
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a jasmonic acid stimulus.
2 Q8VYX0 (/IMP) Q8VYX0 (/IMP)
Auxin metabolic process GO:0009850
The chemical reactions and pathways involving auxins, a group of plant hormones that regulate aspects of plant growth.
2 P54970 (/IDA) P54970 (/IDA)
Cellular amino acid metabolic process GO:0006520
The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.
1 Q5LU44 (/ISS)
Auxin metabolic process GO:0009850
The chemical reactions and pathways involving auxins, a group of plant hormones that regulate aspects of plant growth.
1 P54968 (/IMP)

There are 6 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Endoplasmic reticulum GO:0005783
The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
5 O04373 (/IDA) O04373 (/IDA) P54968 (/IDA) P54970 (/IDA) P54970 (/IDA)
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
2 Q4GYS3 (/IDA) Q4GYS3 (/IDA)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
2 Q4GYS3 (/IDA) Q4GYS3 (/IDA)
Golgi apparatus GO:0005794
A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions.
2 P54969 (/IDA) P54969 (/IDA)
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
2 O04373 (/IDA) O04373 (/IDA)
Ciliary plasm GO:0097014
All of the contents of a cilium, excluding the plasma membrane surrounding the cilium.
2 Q4GYS3 (/IDA) Q4GYS3 (/IDA)
CATH-Gene3D is a Global Biodata Core Resource Learn more...