The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 713: Pre-mRNA-splicing factor CWC2

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 5 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
6 Q12046 (/IPI) Q12046 (/IPI) Q12046 (/IPI) Q12046 (/IPI) Q12046 (/IPI) Q12046 (/IPI)
U6 snRNA binding GO:0017070
Interacting selectively and non-covalently with the U6 small nuclear RNA (U6 snRNA).
6 Q12046 (/IDA) Q12046 (/IDA) Q12046 (/IDA) Q12046 (/IDA) Q12046 (/IDA) Q12046 (/IDA)
Pre-mRNA binding GO:0036002
Interacting selectively and non-covalently with pre-messenger RNA (pre-mRNA), an intermediate molecule between DNA and protein that may contain introns and, at least in part, encodes one or more proteins. Introns are removed from pre-mRNA to form a mRNA molecule.
6 Q12046 (/IDA) Q12046 (/IDA) Q12046 (/IDA) Q12046 (/IDA) Q12046 (/IDA) Q12046 (/IDA)
U6 snRNA binding GO:0017070
Interacting selectively and non-covalently with the U6 small nuclear RNA (U6 snRNA).
3 Q6CT50 (/ISS) Q6FNR8 (/ISS) Q6FNR8 (/ISS)
Pre-mRNA binding GO:0036002
Interacting selectively and non-covalently with pre-messenger RNA (pre-mRNA), an intermediate molecule between DNA and protein that may contain introns and, at least in part, encodes one or more proteins. Introns are removed from pre-mRNA to form a mRNA molecule.
3 Q6CT50 (/ISS) Q6FNR8 (/ISS) Q6FNR8 (/ISS)

There are 10 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Spliceosomal snRNP assembly GO:0000387
The aggregation, arrangement and bonding together of one or more snRNA and multiple protein components to form a ribonucleoprotein complex that is involved in formation of the spliceosome.
6 Q12046 (/IDA) Q12046 (/IDA) Q12046 (/IDA) Q12046 (/IDA) Q12046 (/IDA) Q12046 (/IDA)
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
6 Q12046 (/IMP) Q12046 (/IMP) Q12046 (/IMP) Q12046 (/IMP) Q12046 (/IMP) Q12046 (/IMP)
Positive regulation of RNA splicing GO:0033120
Any process that activates or increases the frequency, rate or extent of RNA splicing.
6 Q12046 (/IDA) Q12046 (/IDA) Q12046 (/IDA) Q12046 (/IDA) Q12046 (/IDA) Q12046 (/IDA)
MRNA cis splicing, via spliceosome GO:0045292
The joining together, after removal of an intervening sequence composed of one or more introns, of two segments of the same RNA molecule via spliceosomal catalysis to produce an mRNA composed only of exon sequences that all came from the same primary transcript.
6 Q12046 (/IDA) Q12046 (/IDA) Q12046 (/IDA) Q12046 (/IDA) Q12046 (/IDA) Q12046 (/IDA)
MRNA cis splicing, via spliceosome GO:0045292
The joining together, after removal of an intervening sequence composed of one or more introns, of two segments of the same RNA molecule via spliceosomal catalysis to produce an mRNA composed only of exon sequences that all came from the same primary transcript.
6 Q12046 (/IMP) Q12046 (/IMP) Q12046 (/IMP) Q12046 (/IMP) Q12046 (/IMP) Q12046 (/IMP)
Positive regulation of cell cycle GO:0045787
Any process that activates or increases the rate or extent of progression through the cell cycle.
6 Q12046 (/IMP) Q12046 (/IMP) Q12046 (/IMP) Q12046 (/IMP) Q12046 (/IMP) Q12046 (/IMP)
Spliceosomal snRNP assembly GO:0000387
The aggregation, arrangement and bonding together of one or more snRNA and multiple protein components to form a ribonucleoprotein complex that is involved in formation of the spliceosome.
3 Q6CT50 (/ISS) Q6FNR8 (/ISS) Q6FNR8 (/ISS)
Positive regulation of RNA splicing GO:0033120
Any process that activates or increases the frequency, rate or extent of RNA splicing.
3 Q6CT50 (/ISS) Q6FNR8 (/ISS) Q6FNR8 (/ISS)
MRNA cis splicing, via spliceosome GO:0045292
The joining together, after removal of an intervening sequence composed of one or more introns, of two segments of the same RNA molecule via spliceosomal catalysis to produce an mRNA composed only of exon sequences that all came from the same primary transcript.
3 Q6CT50 (/ISS) Q6FNR8 (/ISS) Q6FNR8 (/ISS)
Positive regulation of cell cycle GO:0045787
Any process that activates or increases the rate or extent of progression through the cell cycle.
3 Q6CT50 (/ISS) Q6FNR8 (/ISS) Q6FNR8 (/ISS)

There are 4 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Prp19 complex GO:0000974
A protein complex consisting of Prp19 and associated proteins that is involved in the transition from the precatalytic spliceosome to the activated form that catalyzes step 1 of splicing, and which remains associated with the spliceosome through the second catalytic step. It is widely conserved, found in both yeast and mammals, though the exact composition varies. In S. cerevisiae, it contains Prp19p, Ntc20p, Snt309p, Isy1p, Syf2p, Cwc2p, Prp46p, Clf1p, Cef1p, and Syf1p.
6 Q12046 (/IPI) Q12046 (/IPI) Q12046 (/IPI) Q12046 (/IPI) Q12046 (/IPI) Q12046 (/IPI)
U2-type catalytic step 1 spliceosome GO:0071006
A spliceosomal complex that is formed by the displacement of the U1 and U4 snRNPs from the precatalytic spliceosome; the U2, U5 and U6 snRNPs remain associated with the mRNA. This complex, sometimes called the activated spliceosome, is the catalytically active form of the spliceosome, and includes many proteins in addition to those found in the U2, and U5 and U6 snRNPs.
6 Q12046 (/IDA) Q12046 (/IDA) Q12046 (/IDA) Q12046 (/IDA) Q12046 (/IDA) Q12046 (/IDA)
U2-type catalytic step 2 spliceosome GO:0071007
A spliceosomal complex that contains the U2, U5 and U6 snRNPs bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the U2, U5 and U6 snRNPs.
6 Q12046 (/IDA) Q12046 (/IDA) Q12046 (/IDA) Q12046 (/IDA) Q12046 (/IDA) Q12046 (/IDA)
Prp19 complex GO:0000974
A protein complex consisting of Prp19 and associated proteins that is involved in the transition from the precatalytic spliceosome to the activated form that catalyzes step 1 of splicing, and which remains associated with the spliceosome through the second catalytic step. It is widely conserved, found in both yeast and mammals, though the exact composition varies. In S. cerevisiae, it contains Prp19p, Ntc20p, Snt309p, Isy1p, Syf2p, Cwc2p, Prp46p, Clf1p, Cef1p, and Syf1p.
3 Q6CT50 (/ISS) Q6FNR8 (/ISS) Q6FNR8 (/ISS)
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