The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.
FunFam 157: RNA-binding protein 8A
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 6 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
121 |
Q27W01 (/IPI)
Q27W01 (/IPI)
Q27W01 (/IPI)
Q27W01 (/IPI)
Q27W01 (/IPI)
Q27W01 (/IPI)
Q27W01 (/IPI)
Q27W01 (/IPI)
Q27W01 (/IPI)
Q27W01 (/IPI)
(111 more) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
58 |
Q9Y5S9 (/HDA)
Q9Y5S9 (/HDA)
Q9Y5S9 (/HDA)
Q9Y5S9 (/HDA)
Q9Y5S9 (/HDA)
Q9Y5S9 (/HDA)
Q9Y5S9 (/HDA)
Q9Y5S9 (/HDA)
Q9Y5S9 (/HDA)
Q9Y5S9 (/HDA)
(48 more) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
58 |
Q9Y5S9 (/NAS)
Q9Y5S9 (/NAS)
Q9Y5S9 (/NAS)
Q9Y5S9 (/NAS)
Q9Y5S9 (/NAS)
Q9Y5S9 (/NAS)
Q9Y5S9 (/NAS)
Q9Y5S9 (/NAS)
Q9Y5S9 (/NAS)
Q9Y5S9 (/NAS)
(48 more) |
MRNA binding GO:0003729
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
|
58 |
Q9CWZ3 (/IDA)
Q9CWZ3 (/IDA)
Q9CWZ3 (/IDA)
Q9CWZ3 (/IDA)
Q9CWZ3 (/IDA)
Q9CWZ3 (/IDA)
Q9CWZ3 (/IDA)
Q9CWZ3 (/IDA)
Q9CWZ3 (/IDA)
Q9CWZ3 (/IDA)
(48 more) |
MRNA binding GO:0003729
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
|
58 |
Q9Y5S9 (/NAS)
Q9Y5S9 (/NAS)
Q9Y5S9 (/NAS)
Q9Y5S9 (/NAS)
Q9Y5S9 (/NAS)
Q9Y5S9 (/NAS)
Q9Y5S9 (/NAS)
Q9Y5S9 (/NAS)
Q9Y5S9 (/NAS)
Q9Y5S9 (/NAS)
(48 more) |
MRNA binding GO:0003729
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
|
5 | Q9V535 (/ISS) Q9V535 (/ISS) Q9V535 (/ISS) Q9V535 (/ISS) Q9V535 (/ISS) |
There are 25 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Regulation of alternative mRNA splicing, via spliceosome GO:0000381
Any process that modulates the frequency, rate or extent of alternative splicing of nuclear mRNAs.
|
184 |
B5DGI7 (/ISS)
B5DGI7 (/ISS)
B5DGI7 (/ISS)
B5DGI7 (/ISS)
Q27W01 (/ISS)
Q27W01 (/ISS)
Q27W01 (/ISS)
Q27W01 (/ISS)
Q27W01 (/ISS)
Q27W01 (/ISS)
(174 more) |
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
|
184 |
B5DGI7 (/ISS)
B5DGI7 (/ISS)
B5DGI7 (/ISS)
B5DGI7 (/ISS)
Q27W01 (/ISS)
Q27W01 (/ISS)
Q27W01 (/ISS)
Q27W01 (/ISS)
Q27W01 (/ISS)
Q27W01 (/ISS)
(174 more) |
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
|
63 |
Q9V535 (/IC)
Q9V535 (/IC)
Q9V535 (/IC)
Q9V535 (/IC)
Q9V535 (/IC)
Q9Y5S9 (/IC)
Q9Y5S9 (/IC)
Q9Y5S9 (/IC)
Q9Y5S9 (/IC)
Q9Y5S9 (/IC)
(53 more) |
Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0000184
The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins.
|
58 |
Q9Y5S9 (/IMP)
Q9Y5S9 (/IMP)
Q9Y5S9 (/IMP)
Q9Y5S9 (/IMP)
Q9Y5S9 (/IMP)
Q9Y5S9 (/IMP)
Q9Y5S9 (/IMP)
Q9Y5S9 (/IMP)
Q9Y5S9 (/IMP)
Q9Y5S9 (/IMP)
(48 more) |
Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0000184
The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins.
|
58 |
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
(48 more) |
Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0000184
The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins.
|
58 |
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
(48 more) |
Regulation of alternative mRNA splicing, via spliceosome GO:0000381
Any process that modulates the frequency, rate or extent of alternative splicing of nuclear mRNAs.
|
58 |
Q9Y5S9 (/IMP)
Q9Y5S9 (/IMP)
Q9Y5S9 (/IMP)
Q9Y5S9 (/IMP)
Q9Y5S9 (/IMP)
Q9Y5S9 (/IMP)
Q9Y5S9 (/IMP)
Q9Y5S9 (/IMP)
Q9Y5S9 (/IMP)
Q9Y5S9 (/IMP)
(48 more) |
Regulation of alternative mRNA splicing, via spliceosome GO:0000381
Any process that modulates the frequency, rate or extent of alternative splicing of nuclear mRNAs.
|
58 |
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
(48 more) |
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
|
58 |
Q9Y5S9 (/IDA)
Q9Y5S9 (/IDA)
Q9Y5S9 (/IDA)
Q9Y5S9 (/IDA)
Q9Y5S9 (/IDA)
Q9Y5S9 (/IDA)
Q9Y5S9 (/IDA)
Q9Y5S9 (/IDA)
Q9Y5S9 (/IDA)
Q9Y5S9 (/IDA)
(48 more) |
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
|
58 |
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
(48 more) |
MRNA splicing, via spliceosome GO:0000398
The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
|
58 |
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
(48 more) |
RNA export from nucleus GO:0006405
The directed movement of RNA from the nucleus to the cytoplasm.
|
58 |
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
(48 more) |
MRNA export from nucleus GO:0006406
The directed movement of mRNA from the nucleus to the cytoplasm.
|
58 |
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
(48 more) |
MRNA 3'-end processing GO:0031124
Any process involved in forming the mature 3' end of an mRNA molecule.
|
58 |
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
(48 more) |
Microtubule cytoskeleton organization GO:0000226
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins.
|
5 | Q9V535 (/IMP) Q9V535 (/IMP) Q9V535 (/IMP) Q9V535 (/IMP) Q9V535 (/IMP) |
Negative regulation of transposition, DNA-mediated GO:0000335
Any process that stops, prevents, or reduces the frequency, rate or extent of DNA transposition.
|
5 | Q9V535 (/IMP) Q9V535 (/IMP) Q9V535 (/IMP) Q9V535 (/IMP) Q9V535 (/IMP) |
Germarium-derived oocyte fate determination GO:0007294
The cell fate determination process in which a germarium-derived cell becomes capable of differentiating autonomously into an oocyte cell regardless of its environment; upon determination, the cell fate cannot be reversed. An example of this is found in Drosophila melanogaster.
|
5 | Q9V535 (/IMP) Q9V535 (/IMP) Q9V535 (/IMP) Q9V535 (/IMP) Q9V535 (/IMP) |
Oocyte dorsal/ventral axis specification GO:0007310
The establishment, maintenance and elaboration of the dorsal/ventral axis of the oocyte. An example of this is found in Drosophila melanogaster.
|
5 | Q9V535 (/IMP) Q9V535 (/IMP) Q9V535 (/IMP) Q9V535 (/IMP) Q9V535 (/IMP) |
Oocyte anterior/posterior axis specification GO:0007314
Polarization of the oocyte along its anterior-posterior axis. An example of this is found in Drosophila melanogaster.
|
5 | Q9V535 (/IMP) Q9V535 (/IMP) Q9V535 (/IMP) Q9V535 (/IMP) Q9V535 (/IMP) |
Regulation of pole plasm oskar mRNA localization GO:0007317
Any process that modulates the frequency, rate or extent of the process in which oskar mRNA is transported to, or maintained in, the oocyte pole plasm.
|
5 | Q9V535 (/IMP) Q9V535 (/IMP) Q9V535 (/IMP) Q9V535 (/IMP) Q9V535 (/IMP) |
Regulation of pole plasm oskar mRNA localization GO:0007317
Any process that modulates the frequency, rate or extent of the process in which oskar mRNA is transported to, or maintained in, the oocyte pole plasm.
|
5 | Q9V535 (/IPI) Q9V535 (/IPI) Q9V535 (/IPI) Q9V535 (/IPI) Q9V535 (/IPI) |
RNA splicing GO:0008380
The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA.
|
5 | Q9V535 (/IMP) Q9V535 (/IMP) Q9V535 (/IMP) Q9V535 (/IMP) Q9V535 (/IMP) |
Pole plasm oskar mRNA localization GO:0045451
Any process in which oskar mRNA is transported to, or maintained in, the oocyte pole plasm.
|
5 | Q9V535 (/TAS) Q9V535 (/TAS) Q9V535 (/TAS) Q9V535 (/TAS) Q9V535 (/TAS) |
Establishment of pole plasm mRNA localization GO:0046595
Any process that results in the directed movement of mRNA to the oocyte pole plasm.
|
5 | Q9V535 (/TAS) Q9V535 (/TAS) Q9V535 (/TAS) Q9V535 (/TAS) Q9V535 (/TAS) |
Oocyte nucleus localization involved in oocyte dorsal/ventral axis specification GO:0051663
The directed movement of the nucleus to a specific location within a cell during the establishment and maintenance of the dorsal/ventral axis of the oocyte.
|
5 | Q9V535 (/IMP) Q9V535 (/IMP) Q9V535 (/IMP) Q9V535 (/IMP) Q9V535 (/IMP) |
There are 23 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
U2-type catalytic step 1 spliceosome GO:0071006
A spliceosomal complex that is formed by the displacement of the U1 and U4 snRNPs from the precatalytic spliceosome; the U2, U5 and U6 snRNPs remain associated with the mRNA. This complex, sometimes called the activated spliceosome, is the catalytically active form of the spliceosome, and includes many proteins in addition to those found in the U2, and U5 and U6 snRNPs.
|
184 |
B5DGI7 (/ISS)
B5DGI7 (/ISS)
B5DGI7 (/ISS)
B5DGI7 (/ISS)
Q27W01 (/ISS)
Q27W01 (/ISS)
Q27W01 (/ISS)
Q27W01 (/ISS)
Q27W01 (/ISS)
Q27W01 (/ISS)
(174 more) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
179 |
Q27W01 (/IDA)
Q27W01 (/IDA)
Q27W01 (/IDA)
Q27W01 (/IDA)
Q27W01 (/IDA)
Q27W01 (/IDA)
Q27W01 (/IDA)
Q27W01 (/IDA)
Q27W01 (/IDA)
Q27W01 (/IDA)
(169 more) |
Nuclear speck GO:0016607
A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy.
|
116 |
A0A023T787 (/IDA)
A0A023T787 (/IDA)
A0A023T787 (/IDA)
A0A023T787 (/IDA)
A0A023T787 (/IDA)
A0A023T787 (/IDA)
A0A023T787 (/IDA)
A0A023T787 (/IDA)
A0A023T787 (/IDA)
A0A023T787 (/IDA)
(106 more) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
68 |
B5DGI7 (/ISS)
B5DGI7 (/ISS)
B5DGI7 (/ISS)
B5DGI7 (/ISS)
Q28BZ1 (/ISS)
Q3ZCE8 (/ISS)
Q3ZCE8 (/ISS)
Q3ZCE8 (/ISS)
Q3ZCE8 (/ISS)
Q3ZCE8 (/ISS)
(58 more) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
58 |
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
(48 more) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
58 |
Q9Y5S9 (/NAS)
Q9Y5S9 (/NAS)
Q9Y5S9 (/NAS)
Q9Y5S9 (/NAS)
Q9Y5S9 (/NAS)
Q9Y5S9 (/NAS)
Q9Y5S9 (/NAS)
Q9Y5S9 (/NAS)
Q9Y5S9 (/NAS)
Q9Y5S9 (/NAS)
(48 more) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
58 |
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
(48 more) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
58 |
Q9Y5S9 (/NAS)
Q9Y5S9 (/NAS)
Q9Y5S9 (/NAS)
Q9Y5S9 (/NAS)
Q9Y5S9 (/NAS)
Q9Y5S9 (/NAS)
Q9Y5S9 (/NAS)
Q9Y5S9 (/NAS)
Q9Y5S9 (/NAS)
Q9Y5S9 (/NAS)
(48 more) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
58 |
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
Q9Y5S9 (/TAS)
(48 more) |
Nuclear speck GO:0016607
A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy.
|
58 |
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
(48 more) |
Dendrite GO:0030425
A neuron projection that has a short, tapering, morphology. Dendrites receive and integrate signals from other neurons or from sensory stimuli, and conduct nerve impulses towards the axon or the cell body. In most neurons, the impulse is conveyed from dendrites to axon via the cell body, but in some types of unipolar neuron, the impulse does not travel via the cell body.
|
58 |
Q27W01 (/IDA)
Q27W01 (/IDA)
Q27W01 (/IDA)
Q27W01 (/IDA)
Q27W01 (/IDA)
Q27W01 (/IDA)
Q27W01 (/IDA)
Q27W01 (/IDA)
Q27W01 (/IDA)
Q27W01 (/IDA)
(48 more) |
Dendrite GO:0030425
A neuron projection that has a short, tapering, morphology. Dendrites receive and integrate signals from other neurons or from sensory stimuli, and conduct nerve impulses towards the axon or the cell body. In most neurons, the impulse is conveyed from dendrites to axon via the cell body, but in some types of unipolar neuron, the impulse does not travel via the cell body.
|
58 |
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
(48 more) |
Exon-exon junction complex GO:0035145
A multi-subunit complex deposited by the spliceosome upstream of messenger RNA exon-exon junctions. The exon-exon junction complex provides a binding platform for factors involved in mRNA export and nonsense-mediated mRNA decay.
|
58 |
Q9Y5S9 (/IDA)
Q9Y5S9 (/IDA)
Q9Y5S9 (/IDA)
Q9Y5S9 (/IDA)
Q9Y5S9 (/IDA)
Q9Y5S9 (/IDA)
Q9Y5S9 (/IDA)
Q9Y5S9 (/IDA)
Q9Y5S9 (/IDA)
Q9Y5S9 (/IDA)
(48 more) |
Exon-exon junction complex GO:0035145
A multi-subunit complex deposited by the spliceosome upstream of messenger RNA exon-exon junctions. The exon-exon junction complex provides a binding platform for factors involved in mRNA export and nonsense-mediated mRNA decay.
|
58 |
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
(48 more) |
Neuronal cell body GO:0043025
The portion of a neuron that includes the nucleus, but excludes cell projections such as axons and dendrites.
|
58 |
Q27W01 (/IDA)
Q27W01 (/IDA)
Q27W01 (/IDA)
Q27W01 (/IDA)
Q27W01 (/IDA)
Q27W01 (/IDA)
Q27W01 (/IDA)
Q27W01 (/IDA)
Q27W01 (/IDA)
Q27W01 (/IDA)
(48 more) |
Neuronal cell body GO:0043025
The portion of a neuron that includes the nucleus, but excludes cell projections such as axons and dendrites.
|
58 |
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
(48 more) |
U2-type catalytic step 1 spliceosome GO:0071006
A spliceosomal complex that is formed by the displacement of the U1 and U4 snRNPs from the precatalytic spliceosome; the U2, U5 and U6 snRNPs remain associated with the mRNA. This complex, sometimes called the activated spliceosome, is the catalytically active form of the spliceosome, and includes many proteins in addition to those found in the U2, and U5 and U6 snRNPs.
|
58 |
Q9Y5S9 (/IDA)
Q9Y5S9 (/IDA)
Q9Y5S9 (/IDA)
Q9Y5S9 (/IDA)
Q9Y5S9 (/IDA)
Q9Y5S9 (/IDA)
Q9Y5S9 (/IDA)
Q9Y5S9 (/IDA)
Q9Y5S9 (/IDA)
Q9Y5S9 (/IDA)
(48 more) |
U2-type catalytic step 1 spliceosome GO:0071006
A spliceosomal complex that is formed by the displacement of the U1 and U4 snRNPs from the precatalytic spliceosome; the U2, U5 and U6 snRNPs remain associated with the mRNA. This complex, sometimes called the activated spliceosome, is the catalytically active form of the spliceosome, and includes many proteins in addition to those found in the U2, and U5 and U6 snRNPs.
|
58 |
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
(48 more) |
Catalytic step 2 spliceosome GO:0071013
A spliceosomal complex that contains three snRNPs, including U5, bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the associated snRNPs.
|
58 |
Q9Y5S9 (/IDA)
Q9Y5S9 (/IDA)
Q9Y5S9 (/IDA)
Q9Y5S9 (/IDA)
Q9Y5S9 (/IDA)
Q9Y5S9 (/IDA)
Q9Y5S9 (/IDA)
Q9Y5S9 (/IDA)
Q9Y5S9 (/IDA)
Q9Y5S9 (/IDA)
(48 more) |
Catalytic step 2 spliceosome GO:0071013
A spliceosomal complex that contains three snRNPs, including U5, bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the associated snRNPs.
|
58 |
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
Q9CWZ3 (/ISO)
(48 more) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
5 | Q9V535 (/IDA) Q9V535 (/IDA) Q9V535 (/IDA) Q9V535 (/IDA) Q9V535 (/IDA) |
Exon-exon junction complex GO:0035145
A multi-subunit complex deposited by the spliceosome upstream of messenger RNA exon-exon junctions. The exon-exon junction complex provides a binding platform for factors involved in mRNA export and nonsense-mediated mRNA decay.
|
5 | Q9V535 (/IPI) Q9V535 (/IPI) Q9V535 (/IPI) Q9V535 (/IPI) Q9V535 (/IPI) |
Catalytic step 2 spliceosome GO:0071013
A spliceosomal complex that contains three snRNPs, including U5, bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the associated snRNPs.
|
5 | Q9V535 (/HDA) Q9V535 (/HDA) Q9V535 (/HDA) Q9V535 (/HDA) Q9V535 (/HDA) |