The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"Aconitase, domain 3
".
FunFam 9: Aconitate hydratase
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 15 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
4 iron, 4 sulfur cluster binding GO:0051539
Interacting selectively and non-covalently with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands.
|
39 |
A0QX20 (/ISS)
O08451 (/ISS)
O53166 (/ISS)
O53166 (/ISS)
O53166 (/ISS)
O53166 (/ISS)
O53166 (/ISS)
O53166 (/ISS)
O53166 (/ISS)
P37032 (/ISS)
(29 more) |
MRNA binding GO:0003729
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
|
31 |
A0QX20 (/ISS)
O08451 (/ISS)
Q4JVM4 (/ISS)
Q6NH63 (/ISS)
Q6NH63 (/ISS)
Q8FTA8 (/ISS)
Q8NQ98 (/ISS)
Q8ZP52 (/ISS)
Q8ZP52 (/ISS)
Q8ZP52 (/ISS)
(21 more) |
MRNA 3'-UTR binding GO:0003730
Interacting selectively and non-covalently with the 3' untranslated region of an mRNA molecule.
|
31 |
A0QX20 (/ISS)
O08451 (/ISS)
Q4JVM4 (/ISS)
Q6NH63 (/ISS)
Q6NH63 (/ISS)
Q8FTA8 (/ISS)
Q8NQ98 (/ISS)
Q8ZP52 (/ISS)
Q8ZP52 (/ISS)
Q8ZP52 (/ISS)
(21 more) |
Aconitate hydratase activity GO:0003994
Catalysis of the reaction: citrate = isocitrate. The reaction occurs in two steps: (1) citrate = cis-aconitate + H2O, (2) cis-aconitate + H2O = isocitrate. This reaction is the interconversion of citrate and isocitrate via the labile, enzyme-bound intermediate cis-aconitate. Water is removed from one part of the citrate molecule and added back to a different atom to form isocitrate.
|
28 |
O53166 (/IDA)
O53166 (/IDA)
O53166 (/IDA)
O53166 (/IDA)
O53166 (/IDA)
O53166 (/IDA)
O53166 (/IDA)
P25516 (/IDA)
Q8NQ98 (/IDA)
Q8ZP52 (/IDA)
(18 more) |
2-methylisocitrate dehydratase activity GO:0047456
Catalysis of the reaction: (2S,3R)-3-hydroxybutane-1,2,3-tricarboxylate = cis-2-methylaconitate + H(2)O.
|
21 |
A0QX20 (/ISS)
O08451 (/ISS)
O53166 (/ISS)
O53166 (/ISS)
O53166 (/ISS)
O53166 (/ISS)
O53166 (/ISS)
O53166 (/ISS)
O53166 (/ISS)
P37032 (/ISS)
(11 more) |
2-methylisocitrate dehydratase activity GO:0047456
Catalysis of the reaction: (2S,3R)-3-hydroxybutane-1,2,3-tricarboxylate = cis-2-methylaconitate + H(2)O.
|
19 |
Q8ZP52 (/IDA)
Q8ZP52 (/IDA)
Q8ZP52 (/IDA)
Q8ZP52 (/IDA)
Q8ZP52 (/IDA)
Q8ZP52 (/IDA)
Q8ZP52 (/IDA)
Q8ZP52 (/IDA)
Q8ZP52 (/IDA)
Q8ZP52 (/IDA)
(9 more) |
Aconitate hydratase activity GO:0003994
Catalysis of the reaction: citrate = isocitrate. The reaction occurs in two steps: (1) citrate = cis-aconitate + H2O, (2) cis-aconitate + H2O = isocitrate. This reaction is the interconversion of citrate and isocitrate via the labile, enzyme-bound intermediate cis-aconitate. Water is removed from one part of the citrate molecule and added back to a different atom to form isocitrate.
|
13 |
A0QX20 (/ISS)
O08451 (/ISS)
P37032 (/ISS)
P37032 (/ISS)
Q4JVM4 (/ISS)
Q6NH63 (/ISS)
Q6NH63 (/ISS)
Q8FTA8 (/ISS)
Q9I3F5 (/ISS)
Q9I3F5 (/ISS)
(3 more) |
MRNA binding GO:0003729
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
|
10 | O53166 (/IDA) O53166 (/IDA) O53166 (/IDA) O53166 (/IDA) O53166 (/IDA) O53166 (/IDA) O53166 (/IDA) P25516 (/IDA) P37032 (/IDA) P37032 (/IDA) |
MRNA 3'-UTR binding GO:0003730
Interacting selectively and non-covalently with the 3' untranslated region of an mRNA molecule.
|
10 | O53166 (/IDA) O53166 (/IDA) O53166 (/IDA) O53166 (/IDA) O53166 (/IDA) O53166 (/IDA) O53166 (/IDA) P25516 (/IDA) P37032 (/IDA) P37032 (/IDA) |
Iron-responsive element binding GO:0030350
Interacting selectively and non-covalently with the iron-responsive element, a regulatory sequence found in the 5'- and 3'-untranslated regions of mRNAs encoding many iron-binding proteins.
|
7 | O53166 (/IDA) O53166 (/IDA) O53166 (/IDA) O53166 (/IDA) O53166 (/IDA) O53166 (/IDA) O53166 (/IDA) |
Iron ion binding GO:0005506
Interacting selectively and non-covalently with iron (Fe) ions.
|
5 | Q9I3F5 (/ISS) Q9I3F5 (/ISS) Q9I3F5 (/ISS) Q9I3F5 (/ISS) Q9I3F5 (/ISS) |
4 iron, 4 sulfur cluster binding GO:0051539
Interacting selectively and non-covalently with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands.
|
2 | P25516 (/IDA) Q8NQ98 (/IDA) |
Aconitate hydratase activity GO:0003994
Catalysis of the reaction: citrate = isocitrate. The reaction occurs in two steps: (1) citrate = cis-aconitate + H2O, (2) cis-aconitate + H2O = isocitrate. This reaction is the interconversion of citrate and isocitrate via the labile, enzyme-bound intermediate cis-aconitate. Water is removed from one part of the citrate molecule and added back to a different atom to form isocitrate.
|
1 | B0RSR5 (/IMP) |
Iron ion binding GO:0005506
Interacting selectively and non-covalently with iron (Fe) ions.
|
1 | P25516 (/IMP) |
Metal ion binding GO:0046872
Interacting selectively and non-covalently with any metal ion.
|
1 | P25516 (/IDA) |
There are 13 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Tricarboxylic acid cycle GO:0006099
A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle.
|
20 |
Q8NQ98 (/IDA)
Q8ZP52 (/IDA)
Q8ZP52 (/IDA)
Q8ZP52 (/IDA)
Q8ZP52 (/IDA)
Q8ZP52 (/IDA)
Q8ZP52 (/IDA)
Q8ZP52 (/IDA)
Q8ZP52 (/IDA)
Q8ZP52 (/IDA)
(10 more) |
Propionate metabolic process, methylcitrate cycle GO:0019679
The chemical reactions and pathways involving propionate that occur in the methylcitrate cycle.
|
20 |
Q8NQ98 (/IDA)
Q8ZP52 (/IDA)
Q8ZP52 (/IDA)
Q8ZP52 (/IDA)
Q8ZP52 (/IDA)
Q8ZP52 (/IDA)
Q8ZP52 (/IDA)
Q8ZP52 (/IDA)
Q8ZP52 (/IDA)
Q8ZP52 (/IDA)
(10 more) |
Tricarboxylic acid cycle GO:0006099
A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle.
|
11 |
P37032 (/ISS)
P37032 (/ISS)
Q4JVM4 (/ISS)
Q6NH63 (/ISS)
Q6NH63 (/ISS)
Q8FTA8 (/ISS)
Q9I3F5 (/ISS)
Q9I3F5 (/ISS)
Q9I3F5 (/ISS)
Q9I3F5 (/ISS)
(1 more) |
Propionate metabolic process, methylcitrate cycle GO:0019679
The chemical reactions and pathways involving propionate that occur in the methylcitrate cycle.
|
11 |
P37032 (/ISS)
P37032 (/ISS)
Q4JVM4 (/ISS)
Q6NH63 (/ISS)
Q6NH63 (/ISS)
Q8FTA8 (/ISS)
Q9I3F5 (/ISS)
Q9I3F5 (/ISS)
Q9I3F5 (/ISS)
Q9I3F5 (/ISS)
(1 more) |
Tricarboxylic acid cycle GO:0006099
A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle.
|
7 | O53166 (/TAS) O53166 (/TAS) O53166 (/TAS) O53166 (/TAS) O53166 (/TAS) O53166 (/TAS) O53166 (/TAS) |
Response to iron ion GO:0010039
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an iron ion stimulus.
|
7 | O53166 (/IEP) O53166 (/IEP) O53166 (/IEP) O53166 (/IEP) O53166 (/IEP) O53166 (/IEP) O53166 (/IEP) |
Propionate metabolic process, methylcitrate cycle GO:0019679
The chemical reactions and pathways involving propionate that occur in the methylcitrate cycle.
|
7 | O53166 (/TAS) O53166 (/TAS) O53166 (/TAS) O53166 (/TAS) O53166 (/TAS) O53166 (/TAS) O53166 (/TAS) |
Response to oxidative stress GO:0006979
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
|
5 | Q9I3F5 (/ISS) Q9I3F5 (/ISS) Q9I3F5 (/ISS) Q9I3F5 (/ISS) Q9I3F5 (/ISS) |
Anaerobic respiration GO:0009061
The enzymatic release of energy from inorganic and organic compounds (especially carbohydrates and fats) which uses compounds other than oxygen (e.g. nitrate, sulfate) as the terminal electron acceptor.
|
5 | Q9I3F5 (/ISS) Q9I3F5 (/ISS) Q9I3F5 (/ISS) Q9I3F5 (/ISS) Q9I3F5 (/ISS) |
Glyoxylate cycle GO:0006097
A modification of the TCA cycle occurring in some plants and microorganisms, in which isocitrate is cleaved to glyoxylate and succinate. Glyoxylate can then react with acetyl-CoA to form malate.
|
1 | P25516 (/NAS) |
Tricarboxylic acid cycle GO:0006099
A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle.
|
1 | P25516 (/NAS) |
Response to oxidative stress GO:0006979
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
|
1 | P25516 (/IDA) |
Anaerobic respiration GO:0009061
The enzymatic release of energy from inorganic and organic compounds (especially carbohydrates and fats) which uses compounds other than oxygen (e.g. nitrate, sulfate) as the terminal electron acceptor.
|
1 | P25516 (/IDA) |
There are 7 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Extracellular region GO:0005576
The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
|
7 | O53166 (/HDA) O53166 (/HDA) O53166 (/HDA) O53166 (/HDA) O53166 (/HDA) O53166 (/HDA) O53166 (/HDA) |
Cell wall GO:0005618
The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
|
7 | O53166 (/HDA) O53166 (/HDA) O53166 (/HDA) O53166 (/HDA) O53166 (/HDA) O53166 (/HDA) O53166 (/HDA) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
7 | O53166 (/HDA) O53166 (/HDA) O53166 (/HDA) O53166 (/HDA) O53166 (/HDA) O53166 (/HDA) O53166 (/HDA) |
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
|
7 | O53166 (/HDA) O53166 (/HDA) O53166 (/HDA) O53166 (/HDA) O53166 (/HDA) O53166 (/HDA) O53166 (/HDA) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
5 | Q9I3F5 (/ISS) Q9I3F5 (/ISS) Q9I3F5 (/ISS) Q9I3F5 (/ISS) Q9I3F5 (/ISS) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
1 | P25516 (/IDA) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
1 | P25516 (/IDA) |