The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"Ribonuclease H-like superfamily/Ribonuclease H
".
FunFam 50: Transposon Ty2-DR3 Gag-Pol polyprotein
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 6 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
43 |
O13527 (/ISS)
O13535 (/ISS)
P0C2I2 (/ISS)
P0C2I3 (/ISS)
P0C2I5 (/ISS)
P0C2I6 (/ISS)
P0C2I9 (/ISS)
P0C2J0 (/ISS)
P0C2J1 (/ISS)
P0C2J3 (/ISS)
(33 more) |
|
DNA-directed DNA polymerase activity GO:0003887
Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and a 3'hydroxyl group.
|
42 |
O13527 (/ISS)
O13535 (/ISS)
P0C2I2 (/ISS)
P0C2I3 (/ISS)
P0C2I5 (/ISS)
P0C2I6 (/ISS)
P0C2I9 (/ISS)
P0C2J0 (/ISS)
P0C2J1 (/ISS)
P0C2J3 (/ISS)
(32 more) |
|
RNA-directed DNA polymerase activity GO:0003964
Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1). Catalyzes RNA-template-directed extension of the 3'- end of a DNA strand by one deoxynucleotide at a time.
|
42 |
O13527 (/ISS)
O13535 (/ISS)
P0C2I2 (/ISS)
P0C2I3 (/ISS)
P0C2I5 (/ISS)
P0C2I6 (/ISS)
P0C2I9 (/ISS)
P0C2J0 (/ISS)
P0C2J1 (/ISS)
P0C2J3 (/ISS)
(32 more) |
|
Ribonuclease activity GO:0004540
Catalysis of the hydrolysis of phosphodiester bonds in chains of RNA.
|
42 |
O13527 (/ISS)
O13535 (/ISS)
P0C2I2 (/ISS)
P0C2I3 (/ISS)
P0C2I5 (/ISS)
P0C2I6 (/ISS)
P0C2I9 (/ISS)
P0C2J0 (/ISS)
P0C2J1 (/ISS)
P0C2J3 (/ISS)
(32 more) |
|
Peptidase activity GO:0008233
Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
|
42 |
O13527 (/ISS)
O13535 (/ISS)
P0C2I2 (/ISS)
P0C2I3 (/ISS)
P0C2I5 (/ISS)
P0C2I6 (/ISS)
P0C2I9 (/ISS)
P0C2J0 (/ISS)
P0C2J1 (/ISS)
P0C2J3 (/ISS)
(32 more) |
|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
1 | Q12472 (/IPI) |
There are 1 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Transposition, RNA-mediated GO:0032197
Any process involved in a type of transpositional recombination which occurs via an RNA intermediate.
|
43 |
O13527 (/ISS)
O13535 (/ISS)
P0C2I2 (/ISS)
P0C2I3 (/ISS)
P0C2I5 (/ISS)
P0C2I6 (/ISS)
P0C2I9 (/ISS)
P0C2J0 (/ISS)
P0C2J1 (/ISS)
P0C2J3 (/ISS)
(33 more) |
There are 3 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Retrotransposon nucleocapsid GO:0000943
A complex of the retrotransposon RNA genome, reverse transcriptase, integrase, and associated molecules required for reproduction and integration of the retrotransposon into the host genome; the main structural molecule of the nucleocapsid is often a gag protein homolog.
|
43 |
O13527 (/ISS)
O13535 (/ISS)
P0C2I2 (/ISS)
P0C2I3 (/ISS)
P0C2I5 (/ISS)
P0C2I6 (/ISS)
P0C2I9 (/ISS)
P0C2J0 (/ISS)
P0C2J1 (/ISS)
P0C2J3 (/ISS)
(33 more) |
|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
43 |
O13527 (/IDA)
O13535 (/IDA)
P0C2I2 (/IDA)
P0C2I3 (/IDA)
P0C2I5 (/IDA)
P0C2I6 (/IDA)
P0C2I9 (/IDA)
P0C2J0 (/IDA)
P0C2J1 (/IDA)
P0C2J3 (/IDA)
(33 more) |
|
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
1 | O13527 (/HDA) |