The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:

"
Zinc/RING finger domain, C3HC4 (zinc finger)
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
« Back to all FunFams

FunFam 18: Synaptotagmin-like 5, isoform CRA_a

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 21 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
17 A8T6P4 (/IPI) Q7TNY7 (/IPI) Q80T23 (/IPI) Q80T23 (/IPI) Q8K3I4 (/IPI) Q8NFW9 (/IPI) Q8TDW5 (/IPI) Q8VHQ7 (/IPI) Q91V27 (/IPI) Q96C24 (/IPI)
(7 more)
Phospholipid binding GO:0005543
Interacting selectively and non-covalently with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester.
5 Q71SF7 (/ISS) Q8VHQ7 (/ISS) Q96C24 (/ISS) Q96C24 (/ISS) Q96C24 (/ISS)
Neurexin family protein binding GO:0042043
Interacting selectively and non-covalently with neurexins, synaptic cell surface proteins related to latrotoxin receptor, laminin and agrin. Neurexins act as cell recognition molecules at nerve terminals.
5 Q71SF7 (/ISS) Q8VHQ7 (/ISS) Q96C24 (/ISS) Q96C24 (/ISS) Q96C24 (/ISS)
Zinc ion binding GO:0008270
Interacting selectively and non-covalently with zinc (Zn) ions.
4 Q8NFW9 (/NAS) Q99N48 (/NAS) Q9R0Q1 (/NAS) Q9R0Q1 (/NAS)
Phospholipid binding GO:0005543
Interacting selectively and non-covalently with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester.
3 Q99N48 (/IDA) Q9R0Q1 (/IDA) Q9R0Q1 (/IDA)
Neurexin family protein binding GO:0042043
Interacting selectively and non-covalently with neurexins, synaptic cell surface proteins related to latrotoxin receptor, laminin and agrin. Neurexins act as cell recognition molecules at nerve terminals.
3 Q99N48 (/IDA) Q9R0Q1 (/IDA) Q9R0Q1 (/IDA)
Actin binding GO:0003779
Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments.
2 Q8K3I4 (/IDA) Q91V27 (/IDA)
Myosin binding GO:0017022
Interacting selectively and non-covalently with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments.
2 Q8K3I4 (/IDA) Q91V27 (/IDA)
Myosin binding GO:0017022
Interacting selectively and non-covalently with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments.
2 Q9BV36 (/IPI) Q9BV36 (/IPI)
Myosin binding GO:0017022
Interacting selectively and non-covalently with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments.
2 Q8K3I4 (/ISO) Q91V27 (/ISO)
Rab GTPase binding GO:0017137
Interacting selectively and non-covalently with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases.
2 Q8K3I4 (/IDA) Q91V27 (/IDA)
Rab GTPase binding GO:0017137
Interacting selectively and non-covalently with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases.
2 Q9BV36 (/IPI) Q9BV36 (/IPI)
Rab GTPase binding GO:0017137
Interacting selectively and non-covalently with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases.
2 Q8K3I4 (/ISO) Q91V27 (/ISO)
Protein binding, bridging GO:0030674
The binding activity of a molecule that brings together two or more protein molecules, or a protein and another macromolecule or complex, through a selective, non-covalent, often stoichiometric interaction, permitting those molecules to function in a coordinated way.
2 Q9BV36 (/IPI) Q9BV36 (/IPI)
Calcium-dependent phospholipid binding GO:0005544
Interacting selectively and non-covalently with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium.
1 Q99N48 (/IDA)
Protein binding, bridging GO:0030674
The binding activity of a molecule that brings together two or more protein molecules, or a protein and another macromolecule or complex, through a selective, non-covalent, often stoichiometric interaction, permitting those molecules to function in a coordinated way.
1 Q91V27 (/ISO)
Myosin V binding GO:0031489
Interacting selectively and non-covalently with a class V myosin; myosin V is a dimeric molecule involved in intracellular transport.
1 Q91V27 (/IPI)
Microtubule plus-end binding GO:0051010
Interacting selectively and non-covalently with the plus end of a microtubule.
1 Q91V27 (/IPI)
Protein kinase A binding GO:0051018
Interacting selectively and non-covalently with any subunit of protein kinase A.
1 Q7TNY7 (/IDA)
Protein kinase A binding GO:0051018
Interacting selectively and non-covalently with any subunit of protein kinase A.
1 Q8K3I4 (/IPI)
Protein kinase A binding GO:0051018
Interacting selectively and non-covalently with any subunit of protein kinase A.
1 Q8K3I4 (/ISO)

There are 26 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Exocytosis GO:0006887
A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle. Exocytosis can occur either by full fusion, when the vesicle collapses into the plasma membrane, or by a kiss-and-run mechanism that involves the formation of a transient contact, a pore, between a granule (for exemple of chromaffin cells) and the plasma membrane. The latter process most of the time leads to only partial secretion of the granule content. Exocytosis begins with steps that prepare vesicles for fusion with the membrane (tethering and docking) and ends when molecules are secreted from the cell.
5 Q80T23 (/IDA) Q80T23 (/IDA) Q99N48 (/IDA) Q9R0Q1 (/IDA) Q9R0Q1 (/IDA)
Plasma membrane repair GO:0001778
The resealing of a cell plasma membrane after cellular wounding due to, for instance, mechanical stress.
3 Q96C24 (/IDA) Q96C24 (/IDA) Q96C24 (/IDA)
Platelet degranulation GO:0002576
The regulated exocytosis of secretory granules containing preformed mediators such as histamine and serotonin by a platelet.
3 Q96C24 (/TAS) Q96C24 (/TAS) Q96C24 (/TAS)
Lysosome localization GO:0032418
Any process in which a lysosome is transported to, and/or maintained in, a specific location.
3 Q96C24 (/IMP) Q96C24 (/IMP) Q96C24 (/IMP)
Positive regulation of exocytosis GO:0045921
Any process that activates or increases the frequency, rate or extent of exocytosis.
3 Q96C24 (/IMP) Q96C24 (/IMP) Q96C24 (/IMP)
Positive regulation of protein secretion GO:0050714
Any process that activates or increases the frequency, rate or extent of the controlled release of a protein from a cell.
3 Q96C24 (/IMP) Q96C24 (/IMP) Q96C24 (/IMP)
Pigment granule dispersal GO:0051876
The directed movement of pigment granules within a cell towards the cell periphery.
3 A0A2R8Q4M2 (/IMP) E7F2P6 (/IMP) Q05AI5 (/IMP)
Multivesicular body sorting pathway GO:0071985
A vesicle-mediated transport process in which transmembrane proteins are ubiquitylated to facilitate their entry into luminal vesicles of multivesicular bodies (MVBs); upon subsequent fusion of MVBs with lysosomes or vacuoles, the cargo proteins are degraded.
3 Q96C24 (/IMP) Q96C24 (/IMP) Q96C24 (/IMP)
Regulation of plasma membrane repair GO:1905684
Any process that modulates the frequency, rate or extent of plasma membrane repair.
3 Q96C24 (/IMP) Q96C24 (/IMP) Q96C24 (/IMP)
Plasma membrane repair GO:0001778
The resealing of a cell plasma membrane after cellular wounding due to, for instance, mechanical stress.
2 Q9R0Q1 (/ISO) Q9R0Q1 (/ISO)
Exocytosis GO:0006887
A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle. Exocytosis can occur either by full fusion, when the vesicle collapses into the plasma membrane, or by a kiss-and-run mechanism that involves the formation of a transient contact, a pore, between a granule (for exemple of chromaffin cells) and the plasma membrane. The latter process most of the time leads to only partial secretion of the granule content. Exocytosis begins with steps that prepare vesicles for fusion with the membrane (tethering and docking) and ends when molecules are secreted from the cell.
2 Q71SF7 (/ISS) Q8VHQ7 (/ISS)
Positive regulation of insulin secretion GO:0032024
Any process that activates or increases the frequency, rate or extent of the regulated release of insulin.
2 Q8K3I4 (/ISS) Q8NFW9 (/ISS)
Melanosome transport GO:0032402
The directed movement of melanosomes into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
2 Q9BV36 (/NAS) Q9BV36 (/NAS)
Lysosome localization GO:0032418
Any process in which a lysosome is transported to, and/or maintained in, a specific location.
2 Q9R0Q1 (/ISO) Q9R0Q1 (/ISO)
Positive regulation of exocytosis GO:0045921
Any process that activates or increases the frequency, rate or extent of exocytosis.
2 Q9R0Q1 (/ISO) Q9R0Q1 (/ISO)
Negative regulation of insulin secretion GO:0046676
Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of insulin.
2 Q9R0Q1 (/IMP) Q9R0Q1 (/IMP)
Positive regulation of protein secretion GO:0050714
Any process that activates or increases the frequency, rate or extent of the controlled release of a protein from a cell.
2 Q9R0Q1 (/ISO) Q9R0Q1 (/ISO)
Multivesicular body sorting pathway GO:0071985
A vesicle-mediated transport process in which transmembrane proteins are ubiquitylated to facilitate their entry into luminal vesicles of multivesicular bodies (MVBs); upon subsequent fusion of MVBs with lysosomes or vacuoles, the cargo proteins are degraded.
2 Q9R0Q1 (/ISO) Q9R0Q1 (/ISO)
Regulation of plasma membrane repair GO:1905684
Any process that modulates the frequency, rate or extent of plasma membrane repair.
2 Q9R0Q1 (/ISO) Q9R0Q1 (/ISO)
Protein targeting GO:0006605
The process of targeting specific proteins to particular regions of the cell, typically membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif.
1 Q91V27 (/IMP)
Vesicle transport along actin filament GO:0030050
Movement of a vesicle along an actin filament, mediated by motor proteins.
1 Q8K3I4 (/TAS)
Melanocyte differentiation GO:0030318
The process in which a relatively unspecialized cell acquires specialized features of a melanocyte.
1 Q91V27 (/IMP)
Positive regulation of insulin secretion GO:0032024
Any process that activates or increases the frequency, rate or extent of the regulated release of insulin.
1 Q7TNY7 (/IMP)
Positive regulation of insulin secretion GO:0032024
Any process that activates or increases the frequency, rate or extent of the regulated release of insulin.
1 Q8K3I4 (/ISO)
Melanosome localization GO:0032400
Any process in which a melanosome is transported to, and/or maintained in, a specific location within the cell.
1 Q91V27 (/IMP)
Pigmentation GO:0043473
The accumulation of pigment in an organism, tissue or cell, either by increased deposition or by increased number of cells.
1 Q91V27 (/IMP)

There are 37 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Microtubule organizing center GO:0005815
An intracellular structure that can catalyze gamma-tubulin-dependent microtubule nucleation and that can anchor microtubules by interacting with their minus ends, plus ends or sides.
7 A0A024RCF8 (/IDA) A0A024RCF8 (/IDA) A0A024RCF8 (/IDA) Q91V27 (/IDA) Q96C24 (/IDA) Q96C24 (/IDA) Q96C24 (/IDA)
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
6 A0A024RCF8 (/IDA) A0A024RCF8 (/IDA) A0A024RCF8 (/IDA) Q96C24 (/IDA) Q96C24 (/IDA) Q96C24 (/IDA)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
6 A0A024RCF8 (/IDA) A0A024RCF8 (/IDA) A0A024RCF8 (/IDA) Q96C24 (/IDA) Q96C24 (/IDA) Q96C24 (/IDA)
Extrinsic component of membrane GO:0019898
The component of a membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.
5 Q71SF7 (/ISS) Q8VHQ7 (/ISS) Q96C24 (/ISS) Q96C24 (/ISS) Q96C24 (/ISS)
Endosome GO:0005768
A vacuole to which materials ingested by endocytosis are delivered.
3 Q96C24 (/IDA) Q96C24 (/IDA) Q96C24 (/IDA)
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
3 Q96C24 (/TAS) Q96C24 (/TAS) Q96C24 (/TAS)
Apical plasma membrane GO:0016324
The region of the plasma membrane located at the apical end of the cell.
3 Q8K3I4 (/ISO) Q9R0Q1 (/ISO) Q9R0Q1 (/ISO)
Secretory granule membrane GO:0030667
The lipid bilayer surrounding a secretory granule.
3 Q8K3I4 (/ISO) Q9R0Q1 (/ISO) Q9R0Q1 (/ISO)
Platelet alpha granule membrane GO:0031092
The lipid bilayer surrounding the platelet alpha granule.
3 Q96C24 (/TAS) Q96C24 (/TAS) Q96C24 (/TAS)
Perinuclear region of cytoplasm GO:0048471
Cytoplasm situated near, or occurring around, the nucleus.
3 Q7TNY7 (/IDA) Q9BV36 (/IDA) Q9BV36 (/IDA)
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
2 Q9R0Q1 (/ISO) Q9R0Q1 (/ISO)
Endosome GO:0005768
A vacuole to which materials ingested by endocytosis are delivered.
2 Q9R0Q1 (/ISO) Q9R0Q1 (/ISO)
Microtubule organizing center GO:0005815
An intracellular structure that can catalyze gamma-tubulin-dependent microtubule nucleation and that can anchor microtubules by interacting with their minus ends, plus ends or sides.
2 Q9R0Q1 (/ISO) Q9R0Q1 (/ISO)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
2 Q9R0Q1 (/ISO) Q9R0Q1 (/ISO)
Actin cytoskeleton GO:0015629
The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes.
2 Q8K3I4 (/IDA) Q91V27 (/IDA)
Apical plasma membrane GO:0016324
The region of the plasma membrane located at the apical end of the cell.
2 Q7TNY7 (/IDA) Q8VHQ7 (/IDA)
Extrinsic component of membrane GO:0019898
The component of a membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.
2 Q9R0Q1 (/IDA) Q9R0Q1 (/IDA)
Secretory granule GO:0030141
A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell and upon stimulation, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules.
2 Q9R0Q1 (/IDA) Q9R0Q1 (/IDA)
Dendrite GO:0030425
A neuron projection that has a short, tapering, morphology. Dendrites receive and integrate signals from other neurons or from sensory stimuli, and conduct nerve impulses towards the axon or the cell body. In most neurons, the impulse is conveyed from dendrites to axon via the cell body, but in some types of unipolar neuron, the impulse does not travel via the cell body.
2 Q9BV36 (/IDA) Q9BV36 (/IDA)
Secretory granule membrane GO:0030667
The lipid bilayer surrounding a secretory granule.
2 Q7TNY7 (/IDA) Q8VHQ7 (/IDA)
Dense core granule GO:0031045
Electron-dense organelle with a granular internal matrix; contains proteins destined to be secreted.
2 Q8K3I4 (/ISS) Q8NFW9 (/ISS)
Melanosome GO:0042470
A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells.
2 Q8K3I4 (/IDA) Q91V27 (/IDA)
Perinuclear region of cytoplasm GO:0048471
Cytoplasm situated near, or occurring around, the nucleus.
2 Q8K3I4 (/ISO) Q91V27 (/ISO)
Perinuclear region of cytoplasm GO:0048471
Cytoplasm situated near, or occurring around, the nucleus.
2 Q8K3I4 (/ISS) Q8NFW9 (/ISS)
Extracellular exosome GO:0070062
A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
2 Q9BV36 (/HDA) Q9BV36 (/HDA)
Exocyst GO:0000145
A protein complex peripherally associated with the plasma membrane that determines where vesicles dock and fuse. At least eight complex components are conserved between yeast and mammals.
1 Q8K3I4 (/IDA)
Stress fiber GO:0001725
A contractile actin filament bundle that consists of short actin filaments with alternating polarity, cross-linked by alpha-actinin and possibly other actin bundling proteins, and with myosin present in a periodic distribution along the fiber.
1 Q91V27 (/IDA)
Photoreceptor outer segment GO:0001750
The outer segment of a vertebrate photoreceptor that contains a stack of membrane discs embedded with photoreceptor proteins.
1 Q8K3I4 (/IDA)
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
1 Q99N48 (/IDA)
Unconventional myosin complex GO:0016461
A portmanteau term for myosins other than myosin II.
1 Q91V27 (/IMP)
Extrinsic component of plasma membrane GO:0019897
The component of a plasma membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.
1 Q99N48 (/IDA)
Dendrite GO:0030425
A neuron projection that has a short, tapering, morphology. Dendrites receive and integrate signals from other neurons or from sensory stimuli, and conduct nerve impulses towards the axon or the cell body. In most neurons, the impulse is conveyed from dendrites to axon via the cell body, but in some types of unipolar neuron, the impulse does not travel via the cell body.
1 Q91V27 (/ISO)
Cortical actin cytoskeleton GO:0030864
The portion of the actin cytoskeleton, comprising filamentous actin and associated proteins, that lies just beneath the plasma membrane.
1 Q91V27 (/IDA)
Dense core granule GO:0031045
Electron-dense organelle with a granular internal matrix; contains proteins destined to be secreted.
1 Q7TNY7 (/IDA)
Dense core granule GO:0031045
Electron-dense organelle with a granular internal matrix; contains proteins destined to be secreted.
1 Q8K3I4 (/ISO)
Melanosome GO:0042470
A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells.
1 Q91V27 (/TAS)
Synapse GO:0045202
The junction between a nerve fiber of one neuron and another neuron, muscle fiber or glial cell. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane.
1 Q8K3I4 (/IDA)
CATH-Gene3D is a Global Biodata Core Resource Learn more...