The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:

"
Zinc/RING finger domain, C3HC4 (zinc finger)
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 111: Anaphase-promoting complex subunit 11

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 9 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Ubiquitin-ubiquitin ligase activity GO:0034450
Isoenergetic transfer of ubiquitin from one protein to an existing ubiquitin chain via the reaction X-ubiquitin + Y-ubiquitin -> Y-ubiquitin-ubiquitin + X, where both the X-ubiquitin and Y-ubiquitin-ubiquitin linkages are thioester bonds between the C-terminal glycine of ubiquitin and a sulfhydryl side group of a cysteine residue.
36 Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO)
(26 more)
Ubiquitin protein ligase activity GO:0061630
Catalysis of the transfer of ubiquitin to a substrate protein via the reaction X-ubiquitin + S -> X + S-ubiquitin, where X is either an E2 or E3 enzyme, the X-ubiquitin linkage is a thioester bond, and the S-ubiquitin linkage is an amide bond: an isopeptide bond between the C-terminal glycine of ubiquitin and the epsilon-amino group of lysine residues in the substrate or, in the linear extension of ubiquitin chains, a peptide bond the between the C-terminal glycine and N-terminal methionine of ubiquitin residues.
36 Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO)
(26 more)
Cullin family protein binding GO:0097602
Interacting selectively and non-covalently with any member of the cullin family, hydrophobic proteins that act as scaffolds for ubiquitin ligases (E3).
36 Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO)
(26 more)
Ubiquitin protein ligase activity GO:0061630
Catalysis of the transfer of ubiquitin to a substrate protein via the reaction X-ubiquitin + S -> X + S-ubiquitin, where X is either an E2 or E3 enzyme, the X-ubiquitin linkage is a thioester bond, and the S-ubiquitin linkage is an amide bond: an isopeptide bond between the C-terminal glycine of ubiquitin and the epsilon-amino group of lysine residues in the substrate or, in the linear extension of ubiquitin chains, a peptide bond the between the C-terminal glycine and N-terminal methionine of ubiquitin residues.
24 Q7KA43 (/IDA) Q7KA43 (/IDA) Q7KA43 (/IDA) Q7KA43 (/IDA) Q7KA43 (/IDA) Q7KA43 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA)
(14 more)
Ubiquitin-ubiquitin ligase activity GO:0034450
Isoenergetic transfer of ubiquitin from one protein to an existing ubiquitin chain via the reaction X-ubiquitin + Y-ubiquitin -> Y-ubiquitin-ubiquitin + X, where both the X-ubiquitin and Y-ubiquitin-ubiquitin linkages are thioester bonds between the C-terminal glycine of ubiquitin and a sulfhydryl side group of a cysteine residue.
18 Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA)
(8 more)
Cullin family protein binding GO:0097602
Interacting selectively and non-covalently with any member of the cullin family, hydrophobic proteins that act as scaffolds for ubiquitin ligases (E3).
18 Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA)
(8 more)
Zinc ion binding GO:0008270
Interacting selectively and non-covalently with zinc (Zn) ions.
6 Q7KA43 (/ISM) Q7KA43 (/ISM) Q7KA43 (/ISM) Q7KA43 (/ISM) Q7KA43 (/ISM) Q7KA43 (/ISM)
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
3 Q9M9L0 (/IPI) Q9M9L0 (/IPI) Q9M9L0 (/IPI)
Ubiquitin-protein transferase activity GO:0004842
Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.
1 Q54L48 (/ISS)

There are 13 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Protein K11-linked ubiquitination GO:0070979
A protein ubiquitination process in which ubiquitin monomers are attached to a protein, and then ubiquitin polymers are formed by linkages between lysine residues at position 11 of the ubiquitin monomers. K11-linked polyubiquitination targets the substrate protein for degradation. The anaphase-promoting complex promotes the degradation of mitotic regulators by assembling K11-linked polyubiquitin chains.
57 Q3ZCF6 (/ISS) Q3ZCF6 (/ISS) Q3ZCF6 (/ISS) Q5R8A2 (/ISS) Q5R8A2 (/ISS) Q5R8A2 (/ISS) Q5R8A2 (/ISS) Q5R8A2 (/ISS) Q5R8A2 (/ISS) Q5R8A2 (/ISS)
(47 more)
Protein ubiquitination GO:0016567
The process in which one or more ubiquitin groups are added to a protein.
36 Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO)
(26 more)
Protein K11-linked ubiquitination GO:0070979
A protein ubiquitination process in which ubiquitin monomers are attached to a protein, and then ubiquitin polymers are formed by linkages between lysine residues at position 11 of the ubiquitin monomers. K11-linked polyubiquitination targets the substrate protein for degradation. The anaphase-promoting complex promotes the degradation of mitotic regulators by assembling K11-linked polyubiquitin chains.
36 Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO)
(26 more)
Mitotic cell cycle GO:0000278
Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent.
18 Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS)
(8 more)
Ubiquitin-dependent protein catabolic process GO:0006511
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
18 Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS)
(8 more)
Protein ubiquitination GO:0016567
The process in which one or more ubiquitin groups are added to a protein.
18 Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA)
(8 more)
Anaphase-promoting complex-dependent catabolic process GO:0031145
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome.
18 Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS)
(8 more)
Protein K11-linked ubiquitination GO:0070979
A protein ubiquitination process in which ubiquitin monomers are attached to a protein, and then ubiquitin polymers are formed by linkages between lysine residues at position 11 of the ubiquitin monomers. K11-linked polyubiquitination targets the substrate protein for degradation. The anaphase-promoting complex promotes the degradation of mitotic regulators by assembling K11-linked polyubiquitin chains.
18 Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA)
(8 more)
Regulation of mitotic cell cycle phase transition GO:1901990
Any process that modulates the frequency, rate or extent of mitotic cell cycle phase transition.
18 Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS)
(8 more)
Protein ubiquitination GO:0016567
The process in which one or more ubiquitin groups are added to a protein.
6 Q7KA43 (/ISS) Q7KA43 (/ISS) Q7KA43 (/ISS) Q7KA43 (/ISS) Q7KA43 (/ISS) Q7KA43 (/ISS)
Anaphase-promoting complex-dependent catabolic process GO:0031145
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome.
6 Q7KA43 (/IDA) Q7KA43 (/IDA) Q7KA43 (/IDA) Q7KA43 (/IDA) Q7KA43 (/IDA) Q7KA43 (/IDA)
Positive regulation of mitotic metaphase/anaphase transition GO:0045842
Any process that activates or increases the frequency, rate or extent of the cell cycle process in which a cell progresses from metaphase to anaphase during mitosis, triggered by the activation of the anaphase promoting complex by Cdc20/Sleepy homolog which results in the degradation of Securin.
6 Q7KA43 (/IMP) Q7KA43 (/IMP) Q7KA43 (/IMP) Q7KA43 (/IMP) Q7KA43 (/IMP) Q7KA43 (/IMP)
Ubiquitin-dependent protein catabolic process GO:0006511
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
1 Q54L48 (/ISS)

There are 10 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Anaphase-promoting complex GO:0005680
A ubiquitin ligase complex that degrades mitotic cyclins and anaphase inhibitory protein, thereby triggering sister chromatid separation and exit from mitosis. Substrate recognition by APC occurs through degradation signals, the most common of which is termed the Dbox degradation motif, originally discovered in cyclin B.
58 Q3ZCF6 (/ISS) Q3ZCF6 (/ISS) Q3ZCF6 (/ISS) Q54L48 (/ISS) Q5R8A2 (/ISS) Q5R8A2 (/ISS) Q5R8A2 (/ISS) Q5R8A2 (/ISS) Q5R8A2 (/ISS) Q5R8A2 (/ISS)
(48 more)
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
36 Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO)
(26 more)
Anaphase-promoting complex GO:0005680
A ubiquitin ligase complex that degrades mitotic cyclins and anaphase inhibitory protein, thereby triggering sister chromatid separation and exit from mitosis. Substrate recognition by APC occurs through degradation signals, the most common of which is termed the Dbox degradation motif, originally discovered in cyclin B.
36 Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO)
(26 more)
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
36 Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO) Q9CPX9 (/ISO)
(26 more)
Anaphase-promoting complex GO:0005680
A ubiquitin ligase complex that degrades mitotic cyclins and anaphase inhibitory protein, thereby triggering sister chromatid separation and exit from mitosis. Substrate recognition by APC occurs through degradation signals, the most common of which is termed the Dbox degradation motif, originally discovered in cyclin B.
24 Q7KA43 (/IDA) Q7KA43 (/IDA) Q7KA43 (/IDA) Q7KA43 (/IDA) Q7KA43 (/IDA) Q7KA43 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA)
(14 more)
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
18 Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA)
(8 more)
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
18 Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS)
(8 more)
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
18 Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA) Q9NYG5 (/IDA)
(8 more)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
18 Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS) Q9NYG5 (/TAS)
(8 more)
Ubiquitin ligase complex GO:0000151
A protein complex that includes a ubiquitin-protein ligase and enables ubiquitin protein ligase activity. The complex also contains other proteins that may confer substrate specificity on the complex.
6 Q7KA43 (/IDA) Q7KA43 (/IDA) Q7KA43 (/IDA) Q7KA43 (/IDA) Q7KA43 (/IDA) Q7KA43 (/IDA)
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