The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 4: GTPase Der

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 6 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
GTPase activity GO:0003924
Catalysis of the reaction: GTP + H2O = GDP + phosphate.
87 P0A6P5 (/IDA) P0A6P5 (/IDA) P0A6P5 (/IDA) P0A6P5 (/IDA) P0A6P5 (/IDA) P0A6P5 (/IDA) P0A6P5 (/IDA) P0A6P5 (/IDA) P0A6P5 (/IDA) P0A6P5 (/IDA)
(77 more)
GTPase activating protein binding GO:0032794
Interacting selectively and non-covalently with a GTPase activating protein.
87 P0A6P5 (/IPI) P0A6P5 (/IPI) P0A6P5 (/IPI) P0A6P5 (/IPI) P0A6P5 (/IPI) P0A6P5 (/IPI) P0A6P5 (/IPI) P0A6P5 (/IPI) P0A6P5 (/IPI) P0A6P5 (/IPI)
(77 more)
Ribosome binding GO:0043022
Interacting selectively and non-covalently with any part of a ribosome.
87 P0A6P5 (/IDA) P0A6P5 (/IDA) P0A6P5 (/IDA) P0A6P5 (/IDA) P0A6P5 (/IDA) P0A6P5 (/IDA) P0A6P5 (/IDA) P0A6P5 (/IDA) P0A6P5 (/IDA) P0A6P5 (/IDA)
(77 more)
Ribosomal large subunit binding GO:0043023
Interacting selectively and non-covalently with any part of the larger ribosomal subunit.
87 P0A6P5 (/IDA) P0A6P5 (/IDA) P0A6P5 (/IDA) P0A6P5 (/IDA) P0A6P5 (/IDA) P0A6P5 (/IDA) P0A6P5 (/IDA) P0A6P5 (/IDA) P0A6P5 (/IDA) P0A6P5 (/IDA)
(77 more)
Guanosine tetraphosphate binding GO:0097216
Interacting selectively and non-covalently with guanosine tetraphosphate (5'-ppGpp-3'), a guanosine bisphosphate having diphosphate groups at both the 3' and 5'-positions.
87 P0A6P5 (/IDA) P0A6P5 (/IDA) P0A6P5 (/IDA) P0A6P5 (/IDA) P0A6P5 (/IDA) P0A6P5 (/IDA) P0A6P5 (/IDA) P0A6P5 (/IDA) P0A6P5 (/IDA) P0A6P5 (/IDA)
(77 more)
GTP binding GO:0005525
Interacting selectively and non-covalently with GTP, guanosine triphosphate.
7 Q9KTW7 (/ISS) Q9KTW7 (/ISS) Q9KTW7 (/ISS) Q9KTW7 (/ISS) Q9KTW7 (/ISS) Q9KTW7 (/ISS) Q9KTW7 (/ISS)

There are 3 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Ribosomal large subunit assembly GO:0000027
The aggregation, arrangement and bonding together of constituent RNAs and proteins to form the large ribosomal subunit.
87 P0A6P5 (/IMP) P0A6P5 (/IMP) P0A6P5 (/IMP) P0A6P5 (/IMP) P0A6P5 (/IMP) P0A6P5 (/IMP) P0A6P5 (/IMP) P0A6P5 (/IMP) P0A6P5 (/IMP) P0A6P5 (/IMP)
(77 more)
Embryo development ending in seed dormancy GO:0009793
The process whose specific outcome is the progression of the embryo over time, from zygote formation to the end of seed dormancy. An example of this process is found in Arabidopsis thaliana.
2 B5X565 (/IMP) B5X565 (/IMP)
Plastid transcription GO:0042793
The synthesis of RNA from a plastid DNA template, usually by a specific plastid RNA polymerase.
2 B5X565 (/IMP) B5X565 (/IMP)

There are 5 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
87 P0A6P5 (/IDA) P0A6P5 (/IDA) P0A6P5 (/IDA) P0A6P5 (/IDA) P0A6P5 (/IDA) P0A6P5 (/IDA) P0A6P5 (/IDA) P0A6P5 (/IDA) P0A6P5 (/IDA) P0A6P5 (/IDA)
(77 more)
Cell wall GO:0005618
The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
10 P9WNL3 (/HDA) P9WNL3 (/HDA) P9WNL3 (/HDA) P9WNL3 (/HDA) P9WNL3 (/HDA) P9WNL3 (/HDA) P9WNL3 (/HDA) P9WNL3 (/HDA) P9WNL3 (/HDA) P9WNL3 (/HDA)
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
10 P9WNL3 (/HDA) P9WNL3 (/HDA) P9WNL3 (/HDA) P9WNL3 (/HDA) P9WNL3 (/HDA) P9WNL3 (/HDA) P9WNL3 (/HDA) P9WNL3 (/HDA) P9WNL3 (/HDA) P9WNL3 (/HDA)
Chloroplast GO:0009507
A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
2 B5X565 (/IDA) B5X565 (/IDA)
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
1 F4KFX1 (/IDA)