The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"K Homology domain, type 1
".
FunFam 7: far upstream element-binding protein 1 isoform X1
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 18 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
20 |
Q91WJ8 (/IPI)
Q92945 (/IPI)
Q92945 (/IPI)
Q92945 (/IPI)
Q92945 (/IPI)
Q92945 (/IPI)
Q96AE4 (/IPI)
Q96AE4 (/IPI)
Q96AE4 (/IPI)
Q96AE4 (/IPI)
(10 more) |
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
18 |
Q92945 (/HDA)
Q92945 (/HDA)
Q92945 (/HDA)
Q92945 (/HDA)
Q92945 (/HDA)
Q96AE4 (/HDA)
Q96AE4 (/HDA)
Q96AE4 (/HDA)
Q96AE4 (/HDA)
Q96AE4 (/HDA)
(8 more) |
Single-stranded DNA binding GO:0003697
Interacting selectively and non-covalently with single-stranded DNA.
|
10 | Q96AE4 (/TAS) Q96AE4 (/TAS) Q96AE4 (/TAS) Q96AE4 (/TAS) Q96AE4 (/TAS) Q96AE4 (/TAS) Q96AE4 (/TAS) Q96AE4 (/TAS) Q96AE4 (/TAS) Q96AE4 (/TAS) |
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
|
10 | Q96AE4 (/TAS) Q96AE4 (/TAS) Q96AE4 (/TAS) Q96AE4 (/TAS) Q96AE4 (/TAS) Q96AE4 (/TAS) Q96AE4 (/TAS) Q96AE4 (/TAS) Q96AE4 (/TAS) Q96AE4 (/TAS) |
RNA polymerase II proximal promoter sequence-specific DNA binding GO:0000978
Interacting selectively and non-covalently with a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in the proximal promoter of a gene transcribed by RNA polymerase II. The proximal promoter is in cis with and relatively close to the core promoter.
|
5 | A0A0A6YVV5 (/ISO) A2AJ72 (/ISO) F7AM43 (/ISO) Q3TIX6 (/ISO) Q3ULP9 (/ISO) |
DNA-binding transcription activator activity, RNA polymerase II-specific GO:0001228
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a RNA polymerase II-transcribed gene to activate or increase transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units.
|
5 | A0A0A6YVV5 (/ISO) A2AJ72 (/ISO) F7AM43 (/ISO) Q3TIX6 (/ISO) Q3ULP9 (/ISO) |
Single-stranded DNA binding GO:0003697
Interacting selectively and non-covalently with single-stranded DNA.
|
5 | A0A0A6YVV5 (/ISO) A2AJ72 (/ISO) F7AM43 (/ISO) Q3TIX6 (/ISO) Q3ULP9 (/ISO) |
MRNA 3'-UTR AU-rich region binding GO:0035925
Interacting selectively and non-covalently with a region containing frequent adenine and uridine bases within the 3' untranslated region of a mRNA molecule.
|
5 | Q92945 (/IDA) Q92945 (/IDA) Q92945 (/IDA) Q92945 (/IDA) Q92945 (/IDA) |
DNA-binding transcription activator activity, RNA polymerase II-specific GO:0001228
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a RNA polymerase II-transcribed gene to activate or increase transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units.
|
4 | Q91WJ8 (/IDA) Q96I24 (/IDA) Q96I24 (/IDA) Q96I24 (/IDA) |
RNA polymerase II proximal promoter sequence-specific DNA binding GO:0000978
Interacting selectively and non-covalently with a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in the proximal promoter of a gene transcribed by RNA polymerase II. The proximal promoter is in cis with and relatively close to the core promoter.
|
3 | Q96I24 (/IDA) Q96I24 (/IDA) Q96I24 (/IDA) |
MRNA binding GO:0003729
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
|
3 | A1ZBW4 (/TAS) Q8IGP8 (/TAS) Q8SZZ6 (/TAS) |
Transcription factor binding GO:0008134
Interacting selectively and non-covalently with a transcription factor, a protein required to initiate or regulate transcription.
|
3 | A1ZBW4 (/TAS) Q8IGP8 (/TAS) Q8SZZ6 (/TAS) |
MRNA 3'-UTR AU-rich region binding GO:0035925
Interacting selectively and non-covalently with a region containing frequent adenine and uridine bases within the 3' untranslated region of a mRNA molecule.
|
3 | Q3U0V1 (/ISS) Q8UVD9 (/ISS) Q99PF5 (/ISS) |
MRNA 3'-UTR binding GO:0003730
Interacting selectively and non-covalently with the 3' untranslated region of an mRNA molecule.
|
2 | Q8UVD9 (/IDA) Q99PF5 (/IDA) |
MRNA binding GO:0003729
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
|
1 | Q3U0V1 (/IDA) |
MRNA 3'-UTR binding GO:0003730
Interacting selectively and non-covalently with the 3' untranslated region of an mRNA molecule.
|
1 | Q3U0V1 (/ISO) |
MRNA 3'-UTR AU-rich region binding GO:0035925
Interacting selectively and non-covalently with a region containing frequent adenine and uridine bases within the 3' untranslated region of a mRNA molecule.
|
1 | Q3U0V1 (/ISO) |
Sequence-specific double-stranded DNA binding GO:1990837
Interacting selectively and non-covalently with double-stranded DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA, e.g. promotor binding or rDNA binding.
|
1 | Q91WJ8 (/IDA) |
There are 49 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Positive regulation of gene expression GO:0010628
Any process that increases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
|
13 |
Q96AE4 (/IDA)
Q96AE4 (/IDA)
Q96AE4 (/IDA)
Q96AE4 (/IDA)
Q96AE4 (/IDA)
Q96AE4 (/IDA)
Q96AE4 (/IDA)
Q96AE4 (/IDA)
Q96AE4 (/IDA)
Q96AE4 (/IDA)
(3 more) |
Transcription by RNA polymerase II GO:0006366
The synthesis of RNA from a DNA template by RNA polymerase II (RNAP II), originating at an RNA polymerase II promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).
|
10 | Q96AE4 (/TAS) Q96AE4 (/TAS) Q96AE4 (/TAS) Q96AE4 (/TAS) Q96AE4 (/TAS) Q96AE4 (/TAS) Q96AE4 (/TAS) Q96AE4 (/TAS) Q96AE4 (/TAS) Q96AE4 (/TAS) |
Positive regulation of gene expression GO:0010628
Any process that increases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
|
6 | A0A0A6YVV5 (/ISO) A2AJ72 (/ISO) F7AM43 (/ISO) Q3TIX6 (/ISO) Q3ULP9 (/ISO) Q91WJ8 (/ISO) |
RNA splicing, via transesterification reactions GO:0000375
Splicing of RNA via a series of two transesterification reactions.
|
5 | Q92945 (/TAS) Q92945 (/TAS) Q92945 (/TAS) Q92945 (/TAS) Q92945 (/TAS) |
Transcription, DNA-templated GO:0006351
The cellular synthesis of RNA on a template of DNA.
|
5 | A0A0A6YVV5 (/ISO) A2AJ72 (/ISO) F7AM43 (/ISO) Q3TIX6 (/ISO) Q3ULP9 (/ISO) |
MRNA processing GO:0006397
Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide.
|
5 | Q92945 (/TAS) Q92945 (/TAS) Q92945 (/TAS) Q92945 (/TAS) Q92945 (/TAS) |
RNA splicing GO:0008380
The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA.
|
5 | Q92945 (/TAS) Q92945 (/TAS) Q92945 (/TAS) Q92945 (/TAS) Q92945 (/TAS) |
MiRNA metabolic process GO:0010586
The chemical reactions and pathways involving miRNA, microRNA, a class of single-stranded RNA molecules of about 21-23 nucleotides in length, which regulates gene expression.
|
5 | Q92945 (/IMP) Q92945 (/IMP) Q92945 (/IMP) Q92945 (/IMP) Q92945 (/IMP) |
Negative regulation of low-density lipoprotein particle clearance GO:0010989
Any process that decreases the rate, frequency or extent of low-density lipoprotein particle clearance. Low-density lipoprotein particle clearance is the process in which a low-density lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.
|
5 | Q92945 (/IGI) Q92945 (/IGI) Q92945 (/IGI) Q92945 (/IGI) Q92945 (/IGI) |
Regulation of mRNA stability GO:0043488
Any process that modulates the propensity of mRNA molecules to degradation. Includes processes that both stabilize and destabilize mRNAs.
|
5 | Q92945 (/IDA) Q92945 (/IDA) Q92945 (/IDA) Q92945 (/IDA) Q92945 (/IDA) |
Regulation of mRNA stability GO:0043488
Any process that modulates the propensity of mRNA molecules to degradation. Includes processes that both stabilize and destabilize mRNAs.
|
5 | Q92945 (/TAS) Q92945 (/TAS) Q92945 (/TAS) Q92945 (/TAS) Q92945 (/TAS) |
Negative regulation of nitric oxide biosynthetic process GO:0045019
Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide.
|
5 | Q92945 (/IDA) Q92945 (/IDA) Q92945 (/IDA) Q92945 (/IDA) Q92945 (/IDA) |
Positive regulation of transcription, DNA-templated GO:0045893
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
|
5 | A0A0A6YVV5 (/ISO) A2AJ72 (/ISO) F7AM43 (/ISO) Q3TIX6 (/ISO) Q3ULP9 (/ISO) |
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
|
5 | A0A0A6YVV5 (/ISO) A2AJ72 (/ISO) F7AM43 (/ISO) Q3TIX6 (/ISO) Q3ULP9 (/ISO) |
Positive regulation of mRNA catabolic process GO:0061014
Any process that increases the rate, frequency, or extent of a mRNA catabolic process, the chemical reactions and pathways resulting in the breakdown of RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage.
|
5 | Q92945 (/IDA) Q92945 (/IDA) Q92945 (/IDA) Q92945 (/IDA) Q92945 (/IDA) |
3'-UTR-mediated mRNA destabilization GO:0061158
An mRNA destabilization process in which one or more RNA-binding proteins associate with the 3'-untranslated region (UTR) of an mRNA.
|
5 | Q92945 (/IDA) Q92945 (/IDA) Q92945 (/IDA) Q92945 (/IDA) Q92945 (/IDA) |
Cellular response to cytokine stimulus GO:0071345
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus.
|
5 | Q92945 (/IMP) Q92945 (/IMP) Q92945 (/IMP) Q92945 (/IMP) Q92945 (/IMP) |
Regulation of alternative mRNA splicing, via spliceosome GO:0000381
Any process that modulates the frequency, rate or extent of alternative splicing of nuclear mRNAs.
|
3 | A1ZBW4 (/HMP) Q8IGP8 (/HMP) Q8SZZ6 (/HMP) |
Transcription, DNA-templated GO:0006351
The cellular synthesis of RNA on a template of DNA.
|
3 | Q96I24 (/IDA) Q96I24 (/IDA) Q96I24 (/IDA) |
Imaginal disc growth GO:0007446
The increase in mass of imaginal discs by cell proliferation prior to metamorphosis. Imaginal discs are epithelial infoldings in the larvae of holometabolous insects that develop into adult structures (legs, antennae, wings, etc.) during metamorphosis from larval to adult form.
|
3 | A1ZBW4 (/TAS) Q8IGP8 (/TAS) Q8SZZ6 (/TAS) |
Cell population proliferation GO:0008283
The multiplication or reproduction of cells, resulting in the expansion of a cell population.
|
3 | A1ZBW4 (/TAS) Q8IGP8 (/TAS) Q8SZZ6 (/TAS) |
MiRNA metabolic process GO:0010586
The chemical reactions and pathways involving miRNA, microRNA, a class of single-stranded RNA molecules of about 21-23 nucleotides in length, which regulates gene expression.
|
3 | Q3U0V1 (/ISS) Q8UVD9 (/ISS) Q99PF5 (/ISS) |
Appendage morphogenesis GO:0035107
The process in which the anatomical structures of appendages are generated and organized. An appendage is an organ or part that is attached to the trunk of an organism, such as a limb or a branch.
|
3 | A1ZBW4 (/TAS) Q8IGP8 (/TAS) Q8SZZ6 (/TAS) |
Regulation of mRNA stability GO:0043488
Any process that modulates the propensity of mRNA molecules to degradation. Includes processes that both stabilize and destabilize mRNAs.
|
3 | Q3U0V1 (/ISS) Q8UVD9 (/ISS) Q99PF5 (/ISS) |
Negative regulation of nitric oxide biosynthetic process GO:0045019
Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide.
|
3 | Q3U0V1 (/ISS) Q8UVD9 (/ISS) Q99PF5 (/ISS) |
Cell fate commitment GO:0045165
The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field.
|
3 | A1ZBW4 (/TAS) Q8IGP8 (/TAS) Q8SZZ6 (/TAS) |
Positive regulation of transcription, DNA-templated GO:0045893
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
|
3 | Q96I24 (/IDA) Q96I24 (/IDA) Q96I24 (/IDA) |
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
|
3 | Q96I24 (/IDA) Q96I24 (/IDA) Q96I24 (/IDA) |
Positive regulation of mRNA catabolic process GO:0061014
Any process that increases the rate, frequency, or extent of a mRNA catabolic process, the chemical reactions and pathways resulting in the breakdown of RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage.
|
3 | Q3U0V1 (/ISS) Q8UVD9 (/ISS) Q99PF5 (/ISS) |
3'-UTR-mediated mRNA destabilization GO:0061158
An mRNA destabilization process in which one or more RNA-binding proteins associate with the 3'-untranslated region (UTR) of an mRNA.
|
3 | Q3U0V1 (/ISS) Q8UVD9 (/ISS) Q99PF5 (/ISS) |
Cellular response to cytokine stimulus GO:0071345
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus.
|
3 | Q3U0V1 (/ISS) Q8UVD9 (/ISS) Q99PF5 (/ISS) |
Regulation of gene expression GO:0010468
Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
|
2 | A0A2R8RQC2 (/IGI) Q6P2A9 (/IGI) |
Regulation of transcription by RNA polymerase II GO:0006357
Any process that modulates the frequency, rate or extent of transcription mediated by RNA polymerase II.
|
1 | Q91WJ8 (/IMP) |
MRNA catabolic process GO:0006402
The chemical reactions and pathways resulting in the breakdown of mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes.
|
1 | Q3U0V1 (/IDA) |
Intracellular mRNA localization GO:0008298
Any process in which mRNA is transported to, or maintained in, a specific location within the cell.
|
1 | Q8UVD9 (/NAS) |
MiRNA metabolic process GO:0010586
The chemical reactions and pathways involving miRNA, microRNA, a class of single-stranded RNA molecules of about 21-23 nucleotides in length, which regulates gene expression.
|
1 | Q3U0V1 (/ISO) |
Negative regulation of low-density lipoprotein particle clearance GO:0010989
Any process that decreases the rate, frequency or extent of low-density lipoprotein particle clearance. Low-density lipoprotein particle clearance is the process in which a low-density lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.
|
1 | Q3U0V1 (/ISO) |
Regulation of mRNA stability GO:0043488
Any process that modulates the propensity of mRNA molecules to degradation. Includes processes that both stabilize and destabilize mRNAs.
|
1 | Q3U0V1 (/ISO) |
Negative regulation of nitric oxide biosynthetic process GO:0045019
Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide.
|
1 | Q3U0V1 (/ISO) |
Somatic stem cell division GO:0048103
The self-renewing division of a somatic stem cell, a stem cell that can give rise to cell types of the body other than those of the germ-line.
|
1 | Q91WJ8 (/IMP) |
Developmental cell growth GO:0048588
The growth of a cell, where growth contributes to the progression of the cell over time from one condition to another.
|
1 | Q91WJ8 (/IMP) |
Positive regulation of mRNA catabolic process GO:0061014
Any process that increases the rate, frequency, or extent of a mRNA catabolic process, the chemical reactions and pathways resulting in the breakdown of RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage.
|
1 | Q3U0V1 (/ISO) |
3'-UTR-mediated mRNA destabilization GO:0061158
An mRNA destabilization process in which one or more RNA-binding proteins associate with the 3'-untranslated region (UTR) of an mRNA.
|
1 | Q3U0V1 (/ISO) |
Cellular response to lipopolysaccharide GO:0071222
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria.
|
1 | Q32PX7 (/IEP) |
Cellular response to cytokine stimulus GO:0071345
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus.
|
1 | Q3U0V1 (/ISO) |
Hematopoietic stem cell proliferation GO:0071425
The expansion of a hematopoietic stem cell population by cell division. A hematopoietic stem cell is a stem cell from which all cells of the lymphoid and myeloid lineages develop.
|
1 | Q91WJ8 (/IMP) |
Positive regulation of Schwann cell migration GO:1900149
Any process that activates or increases the frequency, rate or extent of Schwann cell migration.
|
1 | Q32PX7 (/IMP) |
Positive regulation of Schwann cell migration GO:1900149
Any process that activates or increases the frequency, rate or extent of Schwann cell migration.
|
1 | Q91WJ8 (/ISO) |
Regulation of miRNA metabolic process GO:2000628
Any process that modulates the frequency, rate or extent of miRNA metabolic process.
|
1 | Q3U0V1 (/IDA) |
There are 24 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
22 |
A0A087WTP3 (/IDA)
E9PEB5 (/IDA)
E9PEB5 (/IDA)
E9PEB5 (/IDA)
E9PEB5 (/IDA)
E9PEB5 (/IDA)
M0R3J3 (/IDA)
Q92945 (/IDA)
Q92945 (/IDA)
Q92945 (/IDA)
(12 more) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
19 |
A1ZBW4 (/IDA)
Q32PX7 (/IDA)
Q8IGP8 (/IDA)
Q8SZZ6 (/IDA)
Q8UVD9 (/IDA)
Q96AE4 (/IDA)
Q96AE4 (/IDA)
Q96AE4 (/IDA)
Q96AE4 (/IDA)
Q96AE4 (/IDA)
(9 more) |
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
|
8 | Q92945 (/HDA) Q92945 (/HDA) Q92945 (/HDA) Q92945 (/HDA) Q92945 (/HDA) Q96I24 (/HDA) Q96I24 (/HDA) Q96I24 (/HDA) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
7 | A0A0A6YVV5 (/ISO) A2AJ72 (/ISO) F7AM43 (/ISO) Q3TIX6 (/ISO) Q3U0V1 (/ISO) Q3ULP9 (/ISO) Q91WJ8 (/ISO) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
6 | Q3U0V1 (/TAS) Q92945 (/TAS) Q92945 (/TAS) Q92945 (/TAS) Q92945 (/TAS) Q92945 (/TAS) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
5 | Q92945 (/TAS) Q92945 (/TAS) Q92945 (/TAS) Q92945 (/TAS) Q92945 (/TAS) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
5 | A0A0A6YVV5 (/ISO) A2AJ72 (/ISO) F7AM43 (/ISO) Q3TIX6 (/ISO) Q3ULP9 (/ISO) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
4 | Q8UVD9 (/IDA) Q96I24 (/IDA) Q96I24 (/IDA) Q96I24 (/IDA) |
Chromatin GO:0000785
The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome.
|
3 | A1ZBW4 (/IDA) Q8IGP8 (/IDA) Q8SZZ6 (/IDA) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
3 | A1ZBW4 (/HDA) Q8IGP8 (/HDA) Q8SZZ6 (/HDA) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
3 | A1ZBW4 (/IC) Q8IGP8 (/IC) Q8SZZ6 (/IC) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
3 | Q96I24 (/NAS) Q96I24 (/NAS) Q96I24 (/NAS) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
3 | A1ZBW4 (/TAS) Q8IGP8 (/TAS) Q8SZZ6 (/TAS) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
3 | A1ZBW4 (/TAS) Q8IGP8 (/TAS) Q8SZZ6 (/TAS) |
Omega speckle GO:0035062
A nucleoplasmic speckle distributed in the interchromatin space of cells in close proximity to chromatin. Omega speckles are distinct from interchromatin granules and contain heterogeneous nuclear RNA-binding proteins (hnRNPs).
|
3 | A1ZBW4 (/IDA) Q8IGP8 (/IDA) Q8SZZ6 (/IDA) |
Ribonucleoprotein complex GO:1990904
A macromolecular complex containing both protein and RNA molecules.
|
3 | A1ZBW4 (/ISS) Q8IGP8 (/ISS) Q8SZZ6 (/ISS) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
2 | Q3U0V1 (/ISO) Q91WJ8 (/ISO) |
Cytoplasmic stress granule GO:0010494
A dense aggregation in the cytosol composed of proteins and RNAs that appear when the cell is under stress.
|
1 | Q3U0V1 (/IDA) |
Dendrite GO:0030425
A neuron projection that has a short, tapering, morphology. Dendrites receive and integrate signals from other neurons or from sensory stimuli, and conduct nerve impulses towards the axon or the cell body. In most neurons, the impulse is conveyed from dendrites to axon via the cell body, but in some types of unipolar neuron, the impulse does not travel via the cell body.
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1 | Q99PF5 (/IDA) |
Dendrite GO:0030425
A neuron projection that has a short, tapering, morphology. Dendrites receive and integrate signals from other neurons or from sensory stimuli, and conduct nerve impulses towards the axon or the cell body. In most neurons, the impulse is conveyed from dendrites to axon via the cell body, but in some types of unipolar neuron, the impulse does not travel via the cell body.
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1 | Q3U0V1 (/ISO) |
Neuronal cell body GO:0043025
The portion of a neuron that includes the nucleus, but excludes cell projections such as axons and dendrites.
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1 | Q99PF5 (/IDA) |
Neuronal cell body GO:0043025
The portion of a neuron that includes the nucleus, but excludes cell projections such as axons and dendrites.
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1 | Q3U0V1 (/ISO) |
Synapse GO:0045202
The junction between a nerve fiber of one neuron and another neuron, muscle fiber or glial cell. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane.
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1 | Q91WJ8 (/EXP) |
Synapse GO:0045202
The junction between a nerve fiber of one neuron and another neuron, muscle fiber or glial cell. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane.
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1 | Q91WJ8 (/IDA) |