CATH Superfamily 3.30.1360.40
The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.
FunFam 1: Ribosome-recycling factor
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 4 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
191 |
P0A805 (/IPI)
P0A805 (/IPI)
P0A805 (/IPI)
P0A805 (/IPI)
P0A805 (/IPI)
P0A805 (/IPI)
P0A805 (/IPI)
P0A805 (/IPI)
P0A805 (/IPI)
P0A805 (/IPI)
(181 more) |
Ribosomal large subunit binding GO:0043023
Interacting selectively and non-covalently with any part of the larger ribosomal subunit.
|
191 |
P0A805 (/IDA)
P0A805 (/IDA)
P0A805 (/IDA)
P0A805 (/IDA)
P0A805 (/IDA)
P0A805 (/IDA)
P0A805 (/IDA)
P0A805 (/IDA)
P0A805 (/IDA)
P0A805 (/IDA)
(181 more) |
Translation termination factor activity GO:0008079
Functions in the termination of translation.
|
10 | P9WGY1 (/IDA) P9WGY1 (/IDA) P9WGY1 (/IDA) P9WGY1 (/IDA) P9WGY1 (/IDA) P9WGY1 (/IDA) P9WGY1 (/IDA) P9WGY1 (/IDA) P9WGY1 (/IDA) P9WGY1 (/IDA) |
Copper ion binding GO:0005507
Interacting selectively and non-covalently with copper (Cu) ions.
|
1 | Q9M1X0 (/IDA) |
There are 9 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Cytoplasmic translational termination GO:0002184
The process resulting in the release of a polypeptide chain from the ribosome in the cytoplasm, usually in response to a termination codon.
|
191 |
P0A805 (/IDA)
P0A805 (/IDA)
P0A805 (/IDA)
P0A805 (/IDA)
P0A805 (/IDA)
P0A805 (/IDA)
P0A805 (/IDA)
P0A805 (/IDA)
P0A805 (/IDA)
P0A805 (/IDA)
(181 more) |
Translation GO:0006412
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
|
13 |
O82853 (/IDA)
O82853 (/IDA)
O82853 (/IDA)
O82853 (/IDA)
O82853 (/IDA)
O82853 (/IDA)
O82853 (/IDA)
O82853 (/IDA)
O82853 (/IDA)
O82853 (/IDA)
(3 more) |
Translational termination GO:0006415
The process resulting in the release of a polypeptide chain from the ribosome, usually in response to a termination codon (UAA, UAG, or UGA in the universal genetic code).
|
10 | P9WGY1 (/IDA) P9WGY1 (/IDA) P9WGY1 (/IDA) P9WGY1 (/IDA) P9WGY1 (/IDA) P9WGY1 (/IDA) P9WGY1 (/IDA) P9WGY1 (/IDA) P9WGY1 (/IDA) P9WGY1 (/IDA) |
Mitochondrial translation GO:0032543
The chemical reactions and pathways resulting in the formation of a protein in a mitochondrion. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein; the mitochondrion has its own ribosomes and transfer RNAs, and uses a genetic code that differs from the nuclear code.
|
2 | Q8T0M6 (/ISS) Q9VSW4 (/ISS) |
Chloroplast organization GO:0009658
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the chloroplast.
|
1 | Q9M1X0 (/IMP) |
Embryo development ending in seed dormancy GO:0009793
The process whose specific outcome is the progression of the embryo over time, from zygote formation to the end of seed dormancy. An example of this process is found in Arabidopsis thaliana.
|
1 | Q9M1X0 (/IMP) |
Defense response to fungus, incompatible interaction GO:0009817
A response of an organism to a fungus that prevents the occurrence or spread of disease.
|
1 | Q9M1X0 (/IDA) |
Plastid translation GO:0032544
The chemical reactions and pathways resulting in the formation of a protein in a plastid. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein; the plastid has its own ribosomes and transfer RNAs, and uses a genetic code that differs from the nuclear code.
|
1 | Q9M1X0 (/IMP) |
Defense response to bacterium GO:0042742
Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism.
|
1 | Q9M1X0 (/IEP) |
There are 9 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
192 |
O51147 (/IDA)
P0A805 (/IDA)
P0A805 (/IDA)
P0A805 (/IDA)
P0A805 (/IDA)
P0A805 (/IDA)
P0A805 (/IDA)
P0A805 (/IDA)
P0A805 (/IDA)
P0A805 (/IDA)
(182 more) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
191 |
P0A805 (/IDA)
P0A805 (/IDA)
P0A805 (/IDA)
P0A805 (/IDA)
P0A805 (/IDA)
P0A805 (/IDA)
P0A805 (/IDA)
P0A805 (/IDA)
P0A805 (/IDA)
P0A805 (/IDA)
(181 more) |
Cell wall GO:0005618
The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
|
10 | P9WGY1 (/HDA) P9WGY1 (/HDA) P9WGY1 (/HDA) P9WGY1 (/HDA) P9WGY1 (/HDA) P9WGY1 (/HDA) P9WGY1 (/HDA) P9WGY1 (/HDA) P9WGY1 (/HDA) P9WGY1 (/HDA) |
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
|
10 | P9WGY1 (/HDA) P9WGY1 (/HDA) P9WGY1 (/HDA) P9WGY1 (/HDA) P9WGY1 (/HDA) P9WGY1 (/HDA) P9WGY1 (/HDA) P9WGY1 (/HDA) P9WGY1 (/HDA) P9WGY1 (/HDA) |
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
|
2 | Q8T0M6 (/ISS) Q9VSW4 (/ISS) |
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
|
1 | Q6NQM0 (/IDA) |
Chloroplast GO:0009507
A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
|
1 | Q9M1X0 (/IDA) |
Chloroplast stroma GO:0009570
The space enclosed by the double membrane of a chloroplast but excluding the thylakoid space. It contains DNA, ribosomes and some temporary products of photosynthesis.
|
1 | Q9M1X0 (/IDA) |
Thylakoid GO:0009579
A membranous cellular structure that bears the photosynthetic pigments in plants, algae, and cyanobacteria. In cyanobacteria thylakoids are of various shapes and are attached to, or continuous with, the plasma membrane. In eukaryotes they are flattened, membrane-bounded disk-like structures located in the chloroplasts; in the chloroplasts of higher plants the thylakoids form dense stacks called grana. Isolated thylakoid preparations can carry out photosynthetic electron transport and the associated phosphorylation.
|
1 | Q9M1X0 (/IDA) |