The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:

"
Divalent-metal-dependent TIM barrel enzymes
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 8: Protein arginine N-methyltransferase 5

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 34 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Transcription corepressor activity GO:0003714
A protein or a member of a complex that interacts specifically and non-covalently with a DNA-bound DNA-binding transcription factor to repress the transcription of specific genes. Corepressors often act by altering chromatin structure and modifications. For example, one class of transcription coregulators modifies chromatin structure through covalent modification of histones. A second ATP-dependent class modifies the conformation of chromatin. A third class occludes DNA-binding transcription factor protein-protein interaction domains. A fourth class of corepressors prevents interactions of DNA bound DNA-binding transcription factor with coactivators.
12 A7YW45 (/ISS) O14744 (/ISS) O14744 (/ISS) O14744 (/ISS) O14744 (/ISS) O14744 (/ISS) O14744 (/ISS) O14744 (/ISS) O14744 (/ISS) Q4R5M3 (/ISS)
(2 more)
E-box binding GO:0070888
Interacting selectively and non-covalently with an E-box, a DNA motif with the consensus sequence CANNTG that is found in the promoters of a wide array of genes expressed in neurons, muscle and other tissues.
12 A7YW45 (/ISS) O14744 (/ISS) O14744 (/ISS) O14744 (/ISS) O14744 (/ISS) O14744 (/ISS) O14744 (/ISS) O14744 (/ISS) O14744 (/ISS) Q4R5M3 (/ISS)
(2 more)
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
9 O14744 (/IPI) O14744 (/IPI) O14744 (/IPI) O14744 (/IPI) O14744 (/IPI) O14744 (/IPI) O14744 (/IPI) O14744 (/IPI) Q8CIG8 (/IPI)
P53 binding GO:0002039
Interacting selectively and non-covalently with one of the p53 family of proteins.
8 O14744 (/IPI) O14744 (/IPI) O14744 (/IPI) O14744 (/IPI) O14744 (/IPI) O14744 (/IPI) O14744 (/IPI) O14744 (/IPI)
Methyltransferase activity GO:0008168
Catalysis of the transfer of a methyl group to an acceptor molecule.
8 O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA)
Methyl-CpG binding GO:0008327
Interacting selectively and non-covalently with a methylated cytosine/guanine dinucleotide.
8 O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA)
Histone-arginine N-methyltransferase activity GO:0008469
Catalysis of the reaction: S-adenosyl-L-methionine + (histone)-arginine = S-adenosyl-L-homocysteine + (histone)-N-methyl-arginine.
8 O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS)
Protein-arginine N-methyltransferase activity GO:0016274
Catalysis of the reaction: S-adenosyl-L-methionine + (protein)-arginine = S-adenosyl-L-homocysteine + (protein)-N-methyl-arginine.
8 O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA)
Protein-arginine omega-N symmetric methyltransferase activity GO:0035243
Catalysis of the addition of a second methyl group to methylated peptidyl-arginine. Methylation is on the terminal nitrogen (omega nitrogen) residue that is not already methylated, resulting in symmetrical peptidyl-N(omega),N'(omega)-dimethyled arginine residues.
8 O14744 (/EXP) O14744 (/EXP) O14744 (/EXP) O14744 (/EXP) O14744 (/EXP) O14744 (/EXP) O14744 (/EXP) O14744 (/EXP)
Protein-arginine omega-N symmetric methyltransferase activity GO:0035243
Catalysis of the addition of a second methyl group to methylated peptidyl-arginine. Methylation is on the terminal nitrogen (omega nitrogen) residue that is not already methylated, resulting in symmetrical peptidyl-N(omega),N'(omega)-dimethyled arginine residues.
8 O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP)
Identical protein binding GO:0042802
Interacting selectively and non-covalently with an identical protein or proteins.
8 O14744 (/IPI) O14744 (/IPI) O14744 (/IPI) O14744 (/IPI) O14744 (/IPI) O14744 (/IPI) O14744 (/IPI) O14744 (/IPI)
Ribonucleoprotein complex binding GO:0043021
Interacting selectively and non-covalently with any complex of RNA and protein.
8 O14744 (/IPI) O14744 (/IPI) O14744 (/IPI) O14744 (/IPI) O14744 (/IPI) O14744 (/IPI) O14744 (/IPI) O14744 (/IPI)
Histone methyltransferase activity (H4-R3 specific) GO:0044020
Catalysis of the reaction: S-adenosyl-L-methionine + (histone H4)-arginine (position 3) = S-adenosyl-L-homocysteine + (histone H4)-N-methyl-arginine (position 3). This reaction is the addition of a methyl group to arginine at position 3 of histone H4.
8 O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP)
Protein heterodimerization activity GO:0046982
Interacting selectively and non-covalently with a nonidentical protein to form a heterodimer.
8 O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA)
Protein-arginine N-methyltransferase activity GO:0016274
Catalysis of the reaction: S-adenosyl-L-methionine + (protein)-arginine = S-adenosyl-L-homocysteine + (protein)-N-methyl-arginine.
5 A7YW45 (/ISS) Q4R5M3 (/ISS) Q54KI3 (/ISS) Q5R698 (/ISS) Q8CIG8 (/ISS)
Methyl-CpG binding GO:0008327
Interacting selectively and non-covalently with a methylated cytosine/guanine dinucleotide.
4 A7YW45 (/ISS) Q4R5M3 (/ISS) Q5R698 (/ISS) Q8CIG8 (/ISS)
Protein-arginine omega-N symmetric methyltransferase activity GO:0035243
Catalysis of the addition of a second methyl group to methylated peptidyl-arginine. Methylation is on the terminal nitrogen (omega nitrogen) residue that is not already methylated, resulting in symmetrical peptidyl-N(omega),N'(omega)-dimethyled arginine residues.
4 A7YW45 (/ISS) Q4R5M3 (/ISS) Q5R698 (/ISS) Q8CIG8 (/ISS)
Histone methyltransferase activity (H4-R3 specific) GO:0044020
Catalysis of the reaction: S-adenosyl-L-methionine + (histone H4)-arginine (position 3) = S-adenosyl-L-homocysteine + (histone H4)-N-methyl-arginine (position 3). This reaction is the addition of a methyl group to arginine at position 3 of histone H4.
4 A7YW45 (/ISS) Q4R5M3 (/ISS) Q5R698 (/ISS) Q8CIG8 (/ISS)
S-adenosylmethionine-dependent methyltransferase activity GO:0008757
Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a substrate.
3 A0A2R8QLZ5 (/ISS) B0R026 (/ISS) Q503E3 (/ISS)
P53 binding GO:0002039
Interacting selectively and non-covalently with one of the p53 family of proteins.
1 Q8CIG8 (/ISO)
Chromatin binding GO:0003682
Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.
1 Q8CIG8 (/IMP)
Transcription corepressor activity GO:0003714
A protein or a member of a complex that interacts specifically and non-covalently with a DNA-bound DNA-binding transcription factor to repress the transcription of specific genes. Corepressors often act by altering chromatin structure and modifications. For example, one class of transcription coregulators modifies chromatin structure through covalent modification of histones. A second ATP-dependent class modifies the conformation of chromatin. A third class occludes DNA-binding transcription factor protein-protein interaction domains. A fourth class of corepressors prevents interactions of DNA bound DNA-binding transcription factor with coactivators.
1 Q8CIG8 (/IMP)
Methyltransferase activity GO:0008168
Catalysis of the transfer of a methyl group to an acceptor molecule.
1 Q8CIG8 (/ISO)
Methyl-CpG binding GO:0008327
Interacting selectively and non-covalently with a methylated cytosine/guanine dinucleotide.
1 Q8CIG8 (/ISO)
Histone-arginine N-methyltransferase activity GO:0008469
Catalysis of the reaction: S-adenosyl-L-methionine + (histone)-arginine = S-adenosyl-L-homocysteine + (histone)-N-methyl-arginine.
1 Q6NUA1 (/IDA)
Protein-arginine N-methyltransferase activity GO:0016274
Catalysis of the reaction: S-adenosyl-L-methionine + (protein)-arginine = S-adenosyl-L-homocysteine + (protein)-N-methyl-arginine.
1 Q8CIG8 (/ISO)
Protein-arginine omega-N symmetric methyltransferase activity GO:0035243
Catalysis of the addition of a second methyl group to methylated peptidyl-arginine. Methylation is on the terminal nitrogen (omega nitrogen) residue that is not already methylated, resulting in symmetrical peptidyl-N(omega),N'(omega)-dimethyled arginine residues.
1 Q8CIG8 (/ISO)
Identical protein binding GO:0042802
Interacting selectively and non-covalently with an identical protein or proteins.
1 Q8CIG8 (/ISO)
Ribonucleoprotein complex binding GO:0043021
Interacting selectively and non-covalently with any complex of RNA and protein.
1 Q8CIG8 (/ISO)
Histone methyltransferase activity (H4-R3 specific) GO:0044020
Catalysis of the reaction: S-adenosyl-L-methionine + (histone H4)-arginine (position 3) = S-adenosyl-L-homocysteine + (histone H4)-N-methyl-arginine (position 3). This reaction is the addition of a methyl group to arginine at position 3 of histone H4.
1 Q8CIG8 (/ISO)
Protein-containing complex binding GO:0044877
Interacting selectively and non-covalently with a macromolecular complex.
1 D4A0E8 (/IDA)
Protein-containing complex binding GO:0044877
Interacting selectively and non-covalently with a macromolecular complex.
1 Q8CIG8 (/ISO)
Protein heterodimerization activity GO:0046982
Interacting selectively and non-covalently with a nonidentical protein to form a heterodimer.
1 Q8CIG8 (/ISO)
E-box binding GO:0070888
Interacting selectively and non-covalently with an E-box, a DNA motif with the consensus sequence CANNTG that is found in the promoters of a wide array of genes expressed in neurons, muscle and other tissues.
1 Q8CIG8 (/IDA)

There are 45 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Circadian regulation of gene expression GO:0032922
Any process that modulates the frequency, rate or extent of gene expression such that an expression pattern recurs with a regularity of approximately 24 hours.
12 A7YW45 (/ISS) O14744 (/ISS) O14744 (/ISS) O14744 (/ISS) O14744 (/ISS) O14744 (/ISS) O14744 (/ISS) O14744 (/ISS) O14744 (/ISS) Q4R5M3 (/ISS)
(2 more)
Histone H4-R3 methylation GO:0043985
The modification of histone H4 by addition of a methyl group to arginine at position 3 of the histone.
12 A7YW45 (/ISS) O14744 (/ISS) O14744 (/ISS) O14744 (/ISS) O14744 (/ISS) O14744 (/ISS) O14744 (/ISS) O14744 (/ISS) O14744 (/ISS) Q4R5M3 (/ISS)
(2 more)
Spliceosomal snRNP assembly GO:0000387
The aggregation, arrangement and bonding together of one or more snRNA and multiple protein components to form a ribonucleoprotein complex that is involved in formation of the spliceosome.
8 O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP)
Spliceosomal snRNP assembly GO:0000387
The aggregation, arrangement and bonding together of one or more snRNA and multiple protein components to form a ribonucleoprotein complex that is involved in formation of the spliceosome.
8 O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS)
DNA-templated transcription, termination GO:0006353
The cellular process that completes DNA-templated transcription; the formation of phosphodiester bonds ceases, the RNA-DNA hybrid dissociates, and RNA polymerase releases the DNA.
8 O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP)
Regulation of mitotic nuclear division GO:0007088
Any process that modulates the frequency, rate or extent of mitosis.
8 O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS)
Peptidyl-arginine methylation GO:0018216
The addition of a methyl group to an arginine residue in a protein.
8 O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP)
Peptidyl-arginine N-methylation GO:0035246
The addition of a methyl group onto a nitrogen atom of an arginine residue in a protein.
8 O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA)
Endothelial cell activation GO:0042118
The change in morphology and behavior of an endothelial cell resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor.
8 O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP)
Histone H4-R3 methylation GO:0043985
The modification of histone H4 by addition of a methyl group to arginine at position 3 of the histone.
8 O14744 (/NAS) O14744 (/NAS) O14744 (/NAS) O14744 (/NAS) O14744 (/NAS) O14744 (/NAS) O14744 (/NAS) O14744 (/NAS)
Golgi ribbon formation GO:0090161
The formation of a continuous ribbon of interconnected Golgi stacks of flat cisternae.
8 O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP) O14744 (/IMP)
Regulation of signal transduction by p53 class mediator GO:1901796
Any process that modulates the frequency, rate or extent of signal transduction by p53 class mediator.
8 O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS)
Positive regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway GO:1904992
Any process that activates or increases the frequency, rate or extent of adenylate cyclase-inhibiting dopamine receptor signaling pathway.
8 O14744 (/IGI) O14744 (/IGI) O14744 (/IGI) O14744 (/IGI) O14744 (/IGI) O14744 (/IGI) O14744 (/IGI) O14744 (/IGI)
Golgi ribbon formation GO:0090161
The formation of a continuous ribbon of interconnected Golgi stacks of flat cisternae.
5 A7YW45 (/ISS) Q4R5M3 (/ISS) Q5R698 (/ISS) Q6NUA1 (/ISS) Q8CIG8 (/ISS)
Spliceosomal snRNP assembly GO:0000387
The aggregation, arrangement and bonding together of one or more snRNA and multiple protein components to form a ribonucleoprotein complex that is involved in formation of the spliceosome.
4 A7YW45 (/ISS) Q4R5M3 (/ISS) Q5R698 (/ISS) Q8CIG8 (/ISS)
DNA-templated transcription, termination GO:0006353
The cellular process that completes DNA-templated transcription; the formation of phosphodiester bonds ceases, the RNA-DNA hybrid dissociates, and RNA polymerase releases the DNA.
4 A7YW45 (/ISS) Q4R5M3 (/ISS) Q5R698 (/ISS) Q8CIG8 (/ISS)
Peptidyl-arginine methylation GO:0018216
The addition of a methyl group to an arginine residue in a protein.
4 A7YW45 (/ISS) Q4R5M3 (/ISS) Q5R698 (/ISS) Q8CIG8 (/ISS)
Endothelial cell activation GO:0042118
The change in morphology and behavior of an endothelial cell resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor.
3 A7YW45 (/ISS) Q4R5M3 (/ISS) Q5R698 (/ISS)
Regulation of skeletal muscle fiber development GO:0048742
Any process that modulates the frequency, rate or extent of skeletal muscle fiber development. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast.
3 A0A2R8QLZ5 (/IMP) B0R026 (/IMP) Q503E3 (/IMP)
Negative regulation of transcription by RNA polymerase II GO:0000122
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II.
1 Q8CIG8 (/IMP)
Spliceosomal snRNP assembly GO:0000387
The aggregation, arrangement and bonding together of one or more snRNA and multiple protein components to form a ribonucleoprotein complex that is involved in formation of the spliceosome.
1 Q8CIG8 (/ISO)
DNA-templated transcription, termination GO:0006353
The cellular process that completes DNA-templated transcription; the formation of phosphodiester bonds ceases, the RNA-DNA hybrid dissociates, and RNA polymerase releases the DNA.
1 Q8CIG8 (/ISO)
Protein methylation GO:0006479
The addition of a methyl group to a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom.
1 D4A0E8 (/IMP)
Protein methylation GO:0006479
The addition of a methyl group to a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom.
1 Q8CIG8 (/ISO)
Regulation of mitotic nuclear division GO:0007088
Any process that modulates the frequency, rate or extent of mitosis.
1 Q6NUA1 (/IMP)
Peptidyl-arginine methylation GO:0018216
The addition of a methyl group to an arginine residue in a protein.
1 Q8CIG8 (/ISO)
Sorocarp development GO:0030587
The process whose specific outcome is the progression of the sorocarp over time, from its formation to the mature structure. The process begins with the aggregation of individual cells and ends with the mature sorocarp. The sorocarp is a structure containing a spore-bearing sorus that sits on top of a stalk. An example of this process is found in Dictyostelium discoideum.
1 Q54KI3 (/HMP)
Circadian regulation of gene expression GO:0032922
Any process that modulates the frequency, rate or extent of gene expression such that an expression pattern recurs with a regularity of approximately 24 hours.
1 Q8CIG8 (/IMP)
Mitotic DNA replication checkpoint GO:0033314
A cell cycle checkpoint that acts during a mitotic cell cycle and prevents the initiation of mitosis until DNA replication is complete, thereby ensuring that progeny inherit a full complement of the genome.
1 Q6NUA1 (/IMP)
Histone arginine methylation GO:0034969
The modification of a histone by addition of a methyl group to an arginine residue.
1 Q6NUA1 (/IDA)
Peptidyl-arginine N-methylation GO:0035246
The addition of a methyl group onto a nitrogen atom of an arginine residue in a protein.
1 Q8CIG8 (/ISO)
Endothelial cell activation GO:0042118
The change in morphology and behavior of an endothelial cell resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor.
1 Q8CIG8 (/ISO)
Histone H4-R3 methylation GO:0043985
The modification of histone H4 by addition of a methyl group to arginine at position 3 of the histone.
1 Q8CIG8 (/IMP)
Regulation of DNA methylation GO:0044030
Any process that modulates the frequency, rate or extent of the covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine.
1 D4A0E8 (/IMP)
Regulation of DNA methylation GO:0044030
Any process that modulates the frequency, rate or extent of the covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine.
1 Q8CIG8 (/ISO)
Negative regulation of cell differentiation GO:0045596
Any process that stops, prevents, or reduces the frequency, rate or extent of cell differentiation.
1 D4A0E8 (/IMP)
Negative regulation of cell differentiation GO:0045596
Any process that stops, prevents, or reduces the frequency, rate or extent of cell differentiation.
1 Q8CIG8 (/ISO)
Positive regulation of oligodendrocyte differentiation GO:0048714
Any process that activates or increases the frequency, rate or extent of oligodendrocyte differentiation.
1 D4A0E8 (/IMP)
Positive regulation of oligodendrocyte differentiation GO:0048714
Any process that activates or increases the frequency, rate or extent of oligodendrocyte differentiation.
1 Q8CIG8 (/ISO)
Regulation of ERK1 and ERK2 cascade GO:0070372
Any process that modulates the frequency, rate or extent of signal transduction mediated by the ERK1 and ERK2 cascade.
1 D4A0E8 (/IMP)
Regulation of ERK1 and ERK2 cascade GO:0070372
Any process that modulates the frequency, rate or extent of signal transduction mediated by the ERK1 and ERK2 cascade.
1 Q8CIG8 (/ISO)
Golgi ribbon formation GO:0090161
The formation of a continuous ribbon of interconnected Golgi stacks of flat cisternae.
1 Q8CIG8 (/ISO)
Liver regeneration GO:0097421
The regrowth of lost or destroyed liver.
1 D4A0E8 (/IEP)
Positive regulation of proteasomal protein catabolic process GO:1901800
Any process that activates or increases the frequency, rate or extent of proteasomal protein catabolic process.
1 Q6NUA1 (/IMP)
Positive regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway GO:1904992
Any process that activates or increases the frequency, rate or extent of adenylate cyclase-inhibiting dopamine receptor signaling pathway.
1 Q8CIG8 (/ISO)

There are 21 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
10 O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) Q6NUA1 (/IDA) Q8CIG8 (/IDA)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
9 O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) Q8CIG8 (/IDA)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
9 O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) Q6NUA1 (/IDA)
Histone methyltransferase complex GO:0035097
A multimeric complex that is able to catalyze the addition of methyl groups to histone proteins.
9 O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) Q8CIG8 (/IDA)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
8 O14744 (/NAS) O14744 (/NAS) O14744 (/NAS) O14744 (/NAS) O14744 (/NAS) O14744 (/NAS) O14744 (/NAS) O14744 (/NAS)
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
8 O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS)
Golgi apparatus GO:0005794
A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions.
8 O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
8 O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS) O14744 (/TAS)
Methylosome GO:0034709
A large (20 S) protein complex that possesses protein arginine methyltransferase activity and modifies specific arginines to dimethylarginines in the arginine- and glycine-rich domains of several spliceosomal Sm proteins, thereby targeting these proteins to the survival of motor neurons (SMN) complex for assembly into small nuclear ribonucleoprotein (snRNP) core particles. Proteins found in the methylosome include the methyltransferase JBP1 (PRMT5), pICln (CLNS1A), MEP50 (WDR77), and unmethylated forms of SM proteins that have RG domains.
8 O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA) O14744 (/IDA)
Golgi apparatus GO:0005794
A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions.
5 A7YW45 (/ISS) Q4R5M3 (/ISS) Q5R698 (/ISS) Q6NUA1 (/ISS) Q8CIG8 (/ISS)
Methylosome GO:0034709
A large (20 S) protein complex that possesses protein arginine methyltransferase activity and modifies specific arginines to dimethylarginines in the arginine- and glycine-rich domains of several spliceosomal Sm proteins, thereby targeting these proteins to the survival of motor neurons (SMN) complex for assembly into small nuclear ribonucleoprotein (snRNP) core particles. Proteins found in the methylosome include the methyltransferase JBP1 (PRMT5), pICln (CLNS1A), MEP50 (WDR77), and unmethylated forms of SM proteins that have RG domains.
5 A7YW45 (/ISS) Q4R5M3 (/ISS) Q5R698 (/ISS) Q6NUA1 (/ISS) Q8CIG8 (/ISS)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
4 A7YW45 (/ISS) Q4R5M3 (/ISS) Q5R698 (/ISS) Q8CIG8 (/ISS)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
3 A7YW45 (/ISS) Q4R5M3 (/ISS) Q5R698 (/ISS)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
1 Q8CIG8 (/ISO)
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
1 Q8CIG8 (/ISO)
Golgi apparatus GO:0005794
A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions.
1 Q8CIG8 (/ISO)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
1 Q8CIG8 (/ISO)
Protein-containing complex GO:0032991
A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together.
1 D4A0E8 (/IDA)
Protein-containing complex GO:0032991
A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together.
1 Q8CIG8 (/ISO)
Methylosome GO:0034709
A large (20 S) protein complex that possesses protein arginine methyltransferase activity and modifies specific arginines to dimethylarginines in the arginine- and glycine-rich domains of several spliceosomal Sm proteins, thereby targeting these proteins to the survival of motor neurons (SMN) complex for assembly into small nuclear ribonucleoprotein (snRNP) core particles. Proteins found in the methylosome include the methyltransferase JBP1 (PRMT5), pICln (CLNS1A), MEP50 (WDR77), and unmethylated forms of SM proteins that have RG domains.
1 Q8CIG8 (/ISO)
Histone methyltransferase complex GO:0035097
A multimeric complex that is able to catalyze the addition of methyl groups to histone proteins.
1 Q8CIG8 (/ISO)
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