The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"MutM-like, N-terminal
".
FunFam 6: Formamidopyrimidine-DNA glycosylase
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 3 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Double-stranded DNA binding GO:0003690
Interacting selectively and non-covalently with double-stranded DNA.
|
9 | P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) |
Oxidized purine nucleobase lesion DNA N-glycosylase activity GO:0008534
Catalysis of the removal of oxidized purine bases by cleaving the N-C1' glycosidic bond between the oxidized purine and the deoxyribose sugar. The reaction involves the formation of a covalent enzyme-substrate intermediate. Release of the enzyme and free base by a beta-elimination or a beta, gamma-elimination mechanism results in the cleavage of the DNA backbone 3' of the apurinic (AP) site.
|
9 | P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) |
8-oxo-7,8-dihydroguanine DNA N-glycosylase activity GO:0034039
Catalysis of the removal of 8-oxo-7,8-dihydroguanine bases by cleaving the N-C1' glycosidic bond between the oxidized purine and the deoxyribose sugar.
|
9 | P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) |
There are 3 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
DNA repair GO:0006281
The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway.
|
9 | P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) |
Base-excision repair GO:0006284
In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase.
|
9 | P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) |
Response to oxidative stress GO:0006979
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
|
9 | P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) P9WNC3 (/IDA) |
There are 1 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
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9 | P9WNC3 (/HDA) P9WNC3 (/HDA) P9WNC3 (/HDA) P9WNC3 (/HDA) P9WNC3 (/HDA) P9WNC3 (/HDA) P9WNC3 (/HDA) P9WNC3 (/HDA) P9WNC3 (/HDA) |