The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:

"
RNAP, epsilon subunit-like
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.

Superfamily: RNAP, epsilon subunit-like

Structural domains comprising this superfamily share the structure of the epsilon, a new subunit of RNA polymerase (RNAP) found in Gram-Positive bacteria which bears remarkable similarity to the Gp2 family of phage proteins involved in the inhibition of host cell transcription following infection. Deletion of epsilon shows no phenotype and has no effect on the transcriptional profile of the cell. Determination of the location of epsilon within the assembly of RNA polymerase core by single-particle analysis suggests that it binds. Due to the structural similarity of epsilon with Gp2 and the fact they bind similar regions of RNA polymerase, toward the downstream side of the DNA binding cleft, we hypothesize that epsilon may serve a role in protection from phage infection PMID:25092033.

GO Diversity

Unique GO annotations
1 Unique GO terms

EC Diversity

Unique EC annotations
0 Unique EC terms

Species Diversity

Unique species annotations
1382 Unique species

Sequence/Structure Diversity

Overview of the sequence / structure diversity of this superfamily compared to other superfamilies in CATH. Click on the chart to view the data in more detail.

Superfamily Summary

A general summary of information for this superfamily.
Structures
Domains: 1
Domain clusters (>95% seq id): 1
Domain clusters (>35% seq id): 1
Unique PDBs: 1
Alignments
Structural Clusters (5A): 1
Structural Clusters (9A): 1
FunFam Clusters: 0
Function
Unique EC:
Unique GO: 1
Taxonomy
Unique Species: 1382
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