The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:

"
Ubiquitin Conjugating Enzyme
".

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 13: SUMO-conjugating enzyme UBC9

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 27 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO TermAnnotationsEvidence
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
378 I3LSZ1 (/IPI) I3LSZ1 (/IPI) I3LSZ1 (/IPI) I3LSZ1 (/IPI) I3LSZ1 (/IPI) I3LSZ1 (/IPI) I3LSZ1 (/IPI) I3LSZ1 (/IPI) I3LSZ1 (/IPI) I3LSZ1 (/IPI)
(368 more)
Transcription factor binding GO:0008134
Interacting selectively and non-covalently with a transcription factor, a protein required to initiate or regulate transcription.
146 P63279 (/IPI) P63279 (/IPI) P63279 (/IPI) P63279 (/IPI) P63279 (/IPI) P63279 (/IPI) P63279 (/IPI) P63279 (/IPI) P63279 (/IPI) P63279 (/IPI)
(136 more)
SUMO conjugating enzyme activity GO:0061656
Isoenergetic transfer of SUMO from one protein to another via the reaction X-SUMO + Y -> Y-SUMO + X, where both the X-SUMO and Y-SUMO linkages are thioester bonds between the C-terminal amino acid of SUMO and a sulfhydryl side group of a cysteine residue.
84 P63279 (/IDA) P63279 (/IDA) P63279 (/IDA) P63279 (/IDA) P63279 (/IDA) P63279 (/IDA) P63279 (/IDA) P63279 (/IDA) P63279 (/IDA) P63279 (/IDA)
(74 more)
SUMO transferase activity GO:0019789
Catalysis of the transfer of SUMO from one protein to another via the reaction X-SUMO + Y --> Y-SUMO + X, where both X-SUMO and Y-SUMO are covalent linkages.
74 P63281 (/IDA) P63281 (/IDA) P63281 (/IDA) P63281 (/IDA) P63281 (/IDA) P63281 (/IDA) P63281 (/IDA) P63281 (/IDA) P63281 (/IDA) P63281 (/IDA)
(64 more)
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
73 P63279 (/HDA) P63279 (/HDA) P63279 (/HDA) P63279 (/HDA) P63279 (/HDA) P63279 (/HDA) P63279 (/HDA) P63279 (/HDA) P63279 (/HDA) P63279 (/HDA)
(63 more)
Ubiquitin-protein transferase activity GO:0004842
Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.
73 P63281 (/IDA) P63281 (/IDA) P63281 (/IDA) P63281 (/IDA) P63281 (/IDA) P63281 (/IDA) P63281 (/IDA) P63281 (/IDA) P63281 (/IDA) P63281 (/IDA)
(63 more)
Ubiquitin-protein transferase activity GO:0004842
Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.
73 P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO)
(63 more)
Protein C-terminus binding GO:0008022
Interacting selectively and non-covalently with a protein C-terminus, the end of any peptide chain at which the 1-carboxyl function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue.
73 P63281 (/IPI) P63281 (/IPI) P63281 (/IPI) P63281 (/IPI) P63281 (/IPI) P63281 (/IPI) P63281 (/IPI) P63281 (/IPI) P63281 (/IPI) P63281 (/IPI)
(63 more)
Protein C-terminus binding GO:0008022
Interacting selectively and non-covalently with a protein C-terminus, the end of any peptide chain at which the 1-carboxyl function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue.
73 P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO)
(63 more)
Transcription factor binding GO:0008134
Interacting selectively and non-covalently with a transcription factor, a protein required to initiate or regulate transcription.
73 P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO)
(63 more)
Showing 1 to 10 of 27 entries

There are 43 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO TermAnnotationsEvidence
Protein sumoylation GO:0016925
The process in which a SUMO protein (small ubiquitin-related modifier) is conjugated to a target protein via an isopeptide bond between the carboxy-terminus of SUMO with an epsilon-amino group of a lysine residue of the target protein.
158 P63279 (/IDA) P63279 (/IDA) P63279 (/IDA) P63279 (/IDA) P63279 (/IDA) P63279 (/IDA) P63279 (/IDA) P63279 (/IDA) P63279 (/IDA) P63279 (/IDA)
(148 more)
Negative regulation of transcription by RNA polymerase II GO:0000122
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II.
146 P63279 (/IMP) P63279 (/IMP) P63279 (/IMP) P63279 (/IMP) P63279 (/IMP) P63279 (/IMP) P63279 (/IMP) P63279 (/IMP) P63279 (/IMP) P63279 (/IMP)
(136 more)
Cellular protein modification process GO:0006464
The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) occurring at the level of an individual cell. Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).
146 P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS)
(136 more)
Ubiquitin-dependent protein catabolic process GO:0006511
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
146 P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS)
(136 more)
Positive regulation of DNA-binding transcription factor activity GO:0051091
Any process that activates or increases the frequency, rate or extent of activity of a transcription factor, any factor involved in the initiation or regulation of transcription.
84 P63281 (/IDA) P63281 (/IDA) P63281 (/IDA) P63281 (/IDA) P63281 (/IDA) P63281 (/IDA) P63281 (/IDA) P63281 (/IDA) P63281 (/IDA) P63281 (/IDA)
(74 more)
Negative regulation of transcription by RNA polymerase II GO:0000122
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II.
73 P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO)
(63 more)
Negative regulation of transcription by RNA polymerase II GO:0000122
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II.
73 P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS)
(63 more)
Regulation of signaling receptor activity GO:0010469
Any process that modulates the frequency, rate or extent of a signaling receptor activity. Receptor activity is when a molecule combines with an extracellular or intracellular messenger to initiate a change in cell activity.
73 P63281 (/IDA) P63281 (/IDA) P63281 (/IDA) P63281 (/IDA) P63281 (/IDA) P63281 (/IDA) P63281 (/IDA) P63281 (/IDA) P63281 (/IDA) P63281 (/IDA)
(63 more)
Regulation of signaling receptor activity GO:0010469
Any process that modulates the frequency, rate or extent of a signaling receptor activity. Receptor activity is when a molecule combines with an extracellular or intracellular messenger to initiate a change in cell activity.
73 P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO)
(63 more)
Protein sumoylation GO:0016925
The process in which a SUMO protein (small ubiquitin-related modifier) is conjugated to a target protein via an isopeptide bond between the carboxy-terminus of SUMO with an epsilon-amino group of a lysine residue of the target protein.
73 P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO)
(63 more)
Showing 1 to 10 of 43 entries

There are 30 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO TermAnnotationsEvidence
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
157 P63279 (/IDA) P63279 (/IDA) P63279 (/IDA) P63279 (/IDA) P63279 (/IDA) P63279 (/IDA) P63279 (/IDA) P63279 (/IDA) P63279 (/IDA) P63279 (/IDA)
(147 more)
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
146 P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS)
(136 more)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
146 P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS)
(136 more)
Nuclear body GO:0016604
Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins.
146 P63280 (/IDA) P63280 (/IDA) P63280 (/IDA) P63280 (/IDA) P63280 (/IDA) P63280 (/IDA) P63280 (/IDA) P63280 (/IDA) P63280 (/IDA) P63280 (/IDA)
(136 more)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
78 B0QYN7 (/IDA) H3BQQ9 (/IDA) H3BQQ9 (/IDA) H3BQQ9 (/IDA) H3BQQ9 (/IDA) P63279 (/IDA) P63279 (/IDA) P63279 (/IDA) P63279 (/IDA) P63279 (/IDA)
(68 more)
Synaptonemal complex GO:0000795
A proteinaceous scaffold found between homologous chromosomes during meiosis. It consists of 2 lateral elements and a central element, all running parallel to each other. Transverse filaments connect the lateral elements to the central element.
73 P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS) P63279 (/TAS)
(63 more)
Fibrillar center GO:0001650
A structure found most metazoan nucleoli, but not usually found in lower eukaryotes; surrounded by the dense fibrillar component; the zone of transcription from multiple copies of the pre-rRNA genes is in the border region between these two structures.
73 P63281 (/IDA) P63281 (/IDA) P63281 (/IDA) P63281 (/IDA) P63281 (/IDA) P63281 (/IDA) P63281 (/IDA) P63281 (/IDA) P63281 (/IDA) P63281 (/IDA)
(63 more)
Fibrillar center GO:0001650
A structure found most metazoan nucleoli, but not usually found in lower eukaryotes; surrounded by the dense fibrillar component; the zone of transcription from multiple copies of the pre-rRNA genes is in the border region between these two structures.
73 P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO)
(63 more)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
73 P63279 (/HDA) P63279 (/HDA) P63279 (/HDA) P63279 (/HDA) P63279 (/HDA) P63279 (/HDA) P63279 (/HDA) P63279 (/HDA) P63279 (/HDA) P63279 (/HDA)
(63 more)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
73 P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO) P63280 (/ISO)
(63 more)
Showing 1 to 10 of 30 entries
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