The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"Transcription factor, T-box
".
FunFam 5: T-box transcription factor TBX5
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 30 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
13 |
O93288 (/IPI)
P70325 (/IPI)
P70326 (/IPI)
P70326 (/IPI)
Q99593 (/IPI)
Q99593 (/IPI)
Q99593 (/IPI)
Q99593 (/IPI)
Q99593 (/IPI)
Q99593 (/IPI)
(3 more) |
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
|
9 | P70326 (/IDA) P70326 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q9IAK8 (/IDA) |
RNA polymerase II proximal promoter sequence-specific DNA binding GO:0000978
Interacting selectively and non-covalently with a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in the proximal promoter of a gene transcribed by RNA polymerase II. The proximal promoter is in cis with and relatively close to the core promoter.
|
8 | P70326 (/ISS) P70326 (/ISS) Q3SA47 (/ISS) Q5I2P1 (/ISS) Q9IAK8 (/ISS) Q9PWE8 (/ISS) Q9PWE8 (/ISS) Q9W7C2 (/ISS) |
DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000981
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a RNA polymerase II-transcribed gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units.
|
8 | P70326 (/ISS) P70326 (/ISS) Q3SA47 (/ISS) Q5I2P1 (/ISS) Q9IAK8 (/ISS) Q9PWE8 (/ISS) Q9PWE8 (/ISS) Q9W7C2 (/ISS) |
DNA binding GO:0003677
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
|
8 | P70326 (/IDA) P70326 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) |
DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000981
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a RNA polymerase II-transcribed gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units.
|
7 | P57082 (/ISA) Q99593 (/ISA) Q99593 (/ISA) Q99593 (/ISA) Q99593 (/ISA) Q99593 (/ISA) Q99593 (/ISA) |
DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000981
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a RNA polymerase II-transcribed gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units.
|
7 | P57082 (/ISM) Q99593 (/ISM) Q99593 (/ISM) Q99593 (/ISM) Q99593 (/ISM) Q99593 (/ISM) Q99593 (/ISM) |
DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000981
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a RNA polymerase II-transcribed gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units.
|
7 | P57082 (/NAS) Q99593 (/NAS) Q99593 (/NAS) Q99593 (/NAS) Q99593 (/NAS) Q99593 (/NAS) Q99593 (/NAS) |
DNA binding GO:0003677
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
|
7 | P70326 (/ISS) P70326 (/ISS) Q3SA47 (/ISS) Q5I2P1 (/ISS) Q9PWE8 (/ISS) Q9PWE8 (/ISS) Q9W7C2 (/ISS) |
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
|
7 | P70326 (/ISS) P70326 (/ISS) Q3SA47 (/ISS) Q5I2P1 (/ISS) Q9PWE8 (/ISS) Q9PWE8 (/ISS) Q9W7C2 (/ISS) |
Sequence-specific DNA binding GO:0043565
Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
|
7 | Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q9IAK8 (/IDA) |
Sequence-specific DNA binding GO:0043565
Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
|
7 | P70326 (/ISS) P70326 (/ISS) Q3SA47 (/ISS) Q5I2P1 (/ISS) Q9PWE8 (/ISS) Q9PWE8 (/ISS) Q9W7C2 (/ISS) |
RNA polymerase II proximal promoter sequence-specific DNA binding GO:0000978
Interacting selectively and non-covalently with a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in the proximal promoter of a gene transcribed by RNA polymerase II. The proximal promoter is in cis with and relatively close to the core promoter.
|
6 | Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) |
DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000981
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a RNA polymerase II-transcribed gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units.
|
6 | Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) |
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
|
6 | Q99593 (/IMP) Q99593 (/IMP) Q99593 (/IMP) Q99593 (/IMP) Q99593 (/IMP) Q99593 (/IMP) |
Transcription factor binding GO:0008134
Interacting selectively and non-covalently with a transcription factor, a protein required to initiate or regulate transcription.
|
6 | Q99593 (/IPI) Q99593 (/IPI) Q99593 (/IPI) Q99593 (/IPI) Q99593 (/IPI) Q99593 (/IPI) |
LIM domain binding GO:0030274
Interacting selectively and non-covalently with a LIM domain (for Lin-11 Isl-1 Mec-3) of a protein, a domain with seven conserved cysteine residues and a histidine, that binds two zinc ions and acts as an interface for protein-protein interactions.
|
5 | O93288 (/IPI) Q9PWE8 (/IPI) Q9PWE8 (/IPI) R9PXM9 (/IPI) R9PXM9 (/IPI) |
Chaperone binding GO:0051087
Interacting selectively and non-covalently with a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport.
|
4 | Q9PWE8 (/IPI) Q9PWE8 (/IPI) R9PXM9 (/IPI) R9PXM9 (/IPI) |
Scaffold protein binding GO:0097110
Interacting selectively and non-covalently with a scaffold protein. Scaffold proteins are crucial regulators of many key signaling pathways. Although not strictly defined in function, they are known to interact and/or bind with multiple members of a signaling pathway, tethering them into complexes.
|
4 | Q9PWE8 (/IPI) Q9PWE8 (/IPI) R9PXM9 (/IPI) R9PXM9 (/IPI) |
RNA polymerase II regulatory region sequence-specific DNA binding GO:0000977
Interacting selectively and non-covalently with a specific sequence of DNA that is part of a regulatory region that controls the transcription of a gene or cistron by RNA polymerase II.
|
2 | P70326 (/IDA) P70326 (/IDA) |
RNA polymerase II proximal promoter sequence-specific DNA binding GO:0000978
Interacting selectively and non-covalently with a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in the proximal promoter of a gene transcribed by RNA polymerase II. The proximal promoter is in cis with and relatively close to the core promoter.
|
2 | P70326 (/ISO) P70326 (/ISO) |
DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000981
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a RNA polymerase II-transcribed gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units.
|
2 | P70326 (/ISO) P70326 (/ISO) |
DNA-binding transcription activator activity, RNA polymerase II-specific GO:0001228
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a RNA polymerase II-transcribed gene to activate or increase transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units.
|
2 | P70326 (/IDA) P70326 (/IDA) |
DNA binding GO:0003677
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
|
2 | P70326 (/ISO) P70326 (/ISO) |
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
|
2 | P70326 (/ISO) P70326 (/ISO) |
Transcription factor binding GO:0008134
Interacting selectively and non-covalently with a transcription factor, a protein required to initiate or regulate transcription.
|
2 | P70326 (/ISO) P70326 (/ISO) |
Sequence-specific DNA binding GO:0043565
Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
|
2 | P70326 (/ISO) P70326 (/ISO) |
RNA polymerase II repressing transcription factor binding GO:0001103
Interacting selectively and non-covalently with an RNA polymerase II transcription repressing factor, a protein involved in negative regulation of transcription.
|
1 | Q9IAK8 (/IPI) |
DNA binding GO:0003677
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
|
1 | P57082 (/NAS) |
DNA-binding transcription factor activity GO:0003700
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
|
1 | P57082 (/TAS) |
There are 108 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Positive regulation of transcription, DNA-templated GO:0045893
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
|
13 |
P70326 (/IDA)
P70326 (/IDA)
Q99593 (/IDA)
Q99593 (/IDA)
Q99593 (/IDA)
Q99593 (/IDA)
Q99593 (/IDA)
Q99593 (/IDA)
Q9IAK8 (/IDA)
Q9PWE8 (/IDA)
(3 more) |
Embryonic forelimb morphogenesis GO:0035115
The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. The forelimbs are the front limbs of an animal, e.g. the arms of a human.
|
12 |
P70326 (/IMP)
P70326 (/IMP)
Q99593 (/IMP)
Q99593 (/IMP)
Q99593 (/IMP)
Q99593 (/IMP)
Q99593 (/IMP)
Q99593 (/IMP)
Q9PWE8 (/IMP)
Q9PWE8 (/IMP)
(2 more) |
Heart development GO:0007507
The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood.
|
11 |
E3W6T6 (/IMP)
G1K2W9 (/IMP)
P70326 (/IMP)
P70326 (/IMP)
Q99593 (/IMP)
Q99593 (/IMP)
Q99593 (/IMP)
Q99593 (/IMP)
Q99593 (/IMP)
Q99593 (/IMP)
(1 more) |
Embryonic limb morphogenesis GO:0030326
The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. A limb is an appendage of an animal used for locomotion or grasping.
|
9 | P70325 (/IMP) P70326 (/IMP) P70326 (/IMP) Q99593 (/IMP) Q99593 (/IMP) Q99593 (/IMP) Q99593 (/IMP) Q99593 (/IMP) Q99593 (/IMP) |
Forelimb morphogenesis GO:0035136
The process in which the anatomical structures of the forelimb are generated and organized. The forelimbs are the front limbs of an animal, e.g. the arms of a human.
|
8 | P70326 (/IMP) P70326 (/IMP) Q99593 (/IMP) Q99593 (/IMP) Q99593 (/IMP) Q99593 (/IMP) Q99593 (/IMP) Q99593 (/IMP) |
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
|
8 | P70326 (/IMP) P70326 (/IMP) Q99593 (/IMP) Q99593 (/IMP) Q99593 (/IMP) Q99593 (/IMP) Q99593 (/IMP) Q99593 (/IMP) |
Cell-cell signaling GO:0007267
Any process that mediates the transfer of information from one cell to another. This process includes signal transduction in the receiving cell and, where applicable, release of a ligand and any processes that actively facilitate its transport and presentation to the receiving cell. Examples include signaling via soluble ligands, via cell adhesion molecules and via gap junctions.
|
7 | P70326 (/ISS) P70326 (/ISS) Q3SA47 (/ISS) Q5I2P1 (/ISS) Q9PWE8 (/ISS) Q9PWE8 (/ISS) Q9W7C2 (/ISS) |
Heart development GO:0007507
The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood.
|
7 | P70326 (/ISS) P70326 (/ISS) Q3SA47 (/ISS) Q5I2P1 (/ISS) Q9PWE8 (/ISS) Q9PWE8 (/ISS) Q9W7C2 (/ISS) |
Negative regulation of cell population proliferation GO:0008285
Any process that stops, prevents or reduces the rate or extent of cell proliferation.
|
7 | P70326 (/ISS) P70326 (/ISS) Q3SA47 (/ISS) Q5I2P1 (/ISS) Q9PWE8 (/ISS) Q9PWE8 (/ISS) Q9W7C2 (/ISS) |
Embryonic limb morphogenesis GO:0030326
The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. A limb is an appendage of an animal used for locomotion or grasping.
|
7 | P70326 (/ISS) P70326 (/ISS) Q3SA47 (/ISS) Q5I2P1 (/ISS) Q9PWE8 (/ISS) Q9PWE8 (/ISS) Q9W7C2 (/ISS) |
Negative regulation of cell migration GO:0030336
Any process that stops, prevents, or reduces the frequency, rate or extent of cell migration.
|
7 | P70326 (/ISS) P70326 (/ISS) Q3SA47 (/ISS) Q5I2P1 (/ISS) Q9PWE8 (/ISS) Q9PWE8 (/ISS) Q9W7C2 (/ISS) |
Embryonic forelimb morphogenesis GO:0035115
The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. The forelimbs are the front limbs of an animal, e.g. the arms of a human.
|
7 | P70326 (/ISS) P70326 (/ISS) Q3SA47 (/ISS) Q5I2P1 (/ISS) Q9PWE8 (/ISS) Q9PWE8 (/ISS) Q9W7C2 (/ISS) |
Positive regulation of transcription, DNA-templated GO:0045893
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
|
7 | P70326 (/ISS) P70326 (/ISS) Q3SA47 (/ISS) Q5I2P1 (/ISS) Q9PWE8 (/ISS) Q9PWE8 (/ISS) Q9W7C2 (/ISS) |
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
|
7 | Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q9IAK8 (/IDA) |
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
|
7 | P70326 (/ISS) P70326 (/ISS) Q3SA47 (/ISS) Q5I2P1 (/ISS) Q9PWE8 (/ISS) Q9PWE8 (/ISS) Q9W7C2 (/ISS) |
Animal organ development GO:0048513
Development of a tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.
|
7 | P70326 (/ISS) P70326 (/ISS) Q3SA47 (/ISS) Q5I2P1 (/ISS) Q9PWE8 (/ISS) Q9PWE8 (/ISS) Q9W7C2 (/ISS) |
Positive regulation of cardioblast differentiation GO:0051891
Any process that activates or increases the frequency, rate or extent of cardioblast differentiation, the process in which a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.
|
7 | P70326 (/ISS) P70326 (/ISS) Q3SA47 (/ISS) Q5I2P1 (/ISS) Q9PWE8 (/ISS) Q9PWE8 (/ISS) Q9W7C2 (/ISS) |
Pericardium development GO:0060039
The process whose specific outcome is the progression of the pericardium over time, from its formation to the mature structure. The pericardium is a double-walled sac that contains the heart and the roots of the aorta, vena cava and the pulmonary artery.
|
7 | P70326 (/ISS) P70326 (/ISS) Q3SA47 (/ISS) Q5I2P1 (/ISS) Q9PWE8 (/ISS) Q9PWE8 (/ISS) Q9W7C2 (/ISS) |
Negative regulation of cardiac muscle cell proliferation GO:0060044
Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle cell proliferation.
|
7 | P70326 (/ISS) P70326 (/ISS) Q3SA47 (/ISS) Q5I2P1 (/ISS) Q9PWE8 (/ISS) Q9PWE8 (/ISS) Q9W7C2 (/ISS) |
Cardiac left ventricle formation GO:0003218
The developmental process pertaining to the initial formation of a left cardiac ventricle from unspecified parts.
|
6 | Q99593 (/ISS) Q99593 (/ISS) Q99593 (/ISS) Q99593 (/ISS) Q99593 (/ISS) Q99593 (/ISS) |
Ventricular septum development GO:0003281
The progression of the ventricular septum over time from its formation to the mature structure.
|
6 | Q99593 (/ISS) Q99593 (/ISS) Q99593 (/ISS) Q99593 (/ISS) Q99593 (/ISS) Q99593 (/ISS) |
Transcription initiation from RNA polymerase II promoter GO:0006367
Any process involved in the assembly of the RNA polymerase II preinitiation complex (PIC) at an RNA polymerase II promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter. The initiation phase includes PIC assembly and the formation of the first few bonds in the RNA chain, including abortive initiation, which occurs when the first few nucleotides are repeatedly synthesized and then released. Promoter clearance, or release, is the transition between the initiation and elongation phases of transcription.
|
6 | Q99593 (/TAS) Q99593 (/TAS) Q99593 (/TAS) Q99593 (/TAS) Q99593 (/TAS) Q99593 (/TAS) |
Cell-cell signaling GO:0007267
Any process that mediates the transfer of information from one cell to another. This process includes signal transduction in the receiving cell and, where applicable, release of a ligand and any processes that actively facilitate its transport and presentation to the receiving cell. Examples include signaling via soluble ligands, via cell adhesion molecules and via gap junctions.
|
6 | Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) |
Heart development GO:0007507
The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood.
|
6 | Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) |
Negative regulation of cell population proliferation GO:0008285
Any process that stops, prevents or reduces the rate or extent of cell proliferation.
|
6 | Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) |
Negative regulation of epithelial to mesenchymal transition GO:0010719
Any process that decreases the rate, frequency, or extent of epithelial to mesenchymal transition. Epithelial to mesenchymal transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.
|
6 | Q99593 (/TAS) Q99593 (/TAS) Q99593 (/TAS) Q99593 (/TAS) Q99593 (/TAS) Q99593 (/TAS) |
Negative regulation of cell migration GO:0030336
Any process that stops, prevents, or reduces the frequency, rate or extent of cell migration.
|
6 | Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) |
Positive regulation of cardioblast differentiation GO:0051891
Any process that activates or increases the frequency, rate or extent of cardioblast differentiation, the process in which a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.
|
6 | Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) |
Pericardium development GO:0060039
The process whose specific outcome is the progression of the pericardium over time, from its formation to the mature structure. The pericardium is a double-walled sac that contains the heart and the roots of the aorta, vena cava and the pulmonary artery.
|
6 | Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) |
Negative regulation of cardiac muscle cell proliferation GO:0060044
Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle cell proliferation.
|
6 | Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) |
Limb bud formation GO:0060174
The process pertaining to the initial formation of a limb bud from unspecified parts. This process begins with the formation of a local condensation of mesenchyme cells within the prospective limb field, and ends when a limb bud is recognizable.
|
6 | O93288 (/IMP) Q9IAK8 (/IMP) Q9PWE8 (/IMP) Q9PWE8 (/IMP) R9PXM9 (/IMP) R9PXM9 (/IMP) |
Cell migration involved in coronary vasculogenesis GO:0060980
The orderly movement of a cell from one site to another that will contribute to the differentiation of an endothelial cell that will form the blood vessels of the heart.
|
6 | Q99593 (/TAS) Q99593 (/TAS) Q99593 (/TAS) Q99593 (/TAS) Q99593 (/TAS) Q99593 (/TAS) |
Regulation of gene expression GO:0010468
Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
|
5 | O93288 (/IMP) Q9PWE8 (/IMP) Q9PWE8 (/IMP) R9PXM9 (/IMP) R9PXM9 (/IMP) |
Embryonic hindlimb morphogenesis GO:0035116
The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. The hindlimbs are the posterior limbs of an animal.
|
4 | B3DGX3 (/IMP) F1R688 (/IMP) O93288 (/IMP) Q9IAK9 (/IMP) |
Heart looping GO:0001947
The tube morphogenesis process in which the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceding their future integration. Heart looping begins with dextral-looping and ends when the main regional divisions of the mature heart and primordium of the great arterial trunks become established preceeding septation.
|
3 | E3W6T6 (/IGI) G1K2W9 (/IGI) Q9IAK8 (/IGI) |
Heart looping GO:0001947
The tube morphogenesis process in which the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceding their future integration. Heart looping begins with dextral-looping and ends when the main regional divisions of the mature heart and primordium of the great arterial trunks become established preceeding septation.
|
3 | E3W6T6 (/IMP) G1K2W9 (/IMP) Q9IAK8 (/IMP) |
Morphogenesis of an epithelium GO:0002009
The process in which the anatomical structures of epithelia are generated and organized. An epithelium consists of closely packed cells arranged in one or more layers, that covers the outer surfaces of the body or lines any internal cavity or tube.
|
3 | P70325 (/IMP) P70326 (/IMP) P70326 (/IMP) |
Heart morphogenesis GO:0003007
The developmental process in which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood.
|
3 | E3W6T6 (/IMP) G1K2W9 (/IMP) Q9IAK8 (/IMP) |
Heart jogging GO:0003146
The morphogenetic process in which the heart cone is displaced to the left with respect to the vector of the anterior-posterior axis.
|
3 | E3W6T6 (/IGI) G1K2W9 (/IGI) Q9IAK8 (/IGI) |
Heart jogging GO:0003146
The morphogenetic process in which the heart cone is displaced to the left with respect to the vector of the anterior-posterior axis.
|
3 | E3W6T6 (/IMP) G1K2W9 (/IMP) Q9IAK8 (/IMP) |
Regulation of transcription, DNA-templated GO:0006355
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
|
3 | P70326 (/IMP) P70326 (/IMP) Q9IAK8 (/IMP) |
Optic nerve development GO:0021554
The process whose specific outcome is the progression of the optic nerve over time, from its formation to the mature structure. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain.
|
3 | E3W6T6 (/IGI) G1K2W9 (/IGI) Q9IAK8 (/IGI) |
Lung development GO:0030324
The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the esophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax.
|
3 | P70325 (/IMP) P70326 (/IMP) P70326 (/IMP) |
Pectoral fin development GO:0033339
The process whose specific outcome is the progression of the pectoral fin over time, from its formation to the mature structure.
|
3 | E3W6T6 (/IMP) G1K2W9 (/IMP) Q9IAK8 (/IMP) |
Pelvic fin development GO:0033340
The process whose specific outcome is the progression of the pelvic fin over time, from its formation to the mature structure.
|
3 | B3DGX3 (/IMP) F1R688 (/IMP) Q9IAK9 (/IMP) |
Limb morphogenesis GO:0035108
The process in which the anatomical structures of a limb are generated and organized. A limb is a paired appendage of a tetrapod used for locomotion or grasping.
|
3 | O93288 (/ISS) P70325 (/ISS) Q861Q9 (/ISS) |
Embryonic pelvic fin morphogenesis GO:0035119
The process, occurring in the embryo, by which the anatomical structures of the pelvic fin are generated and organized. The pelvic fins are bilaterally paired fins mounted in a ventral-lateral position on most fish. These fins are used primarily for lateral mobility and propulsion.
|
3 | B3DGX3 (/IMP) F1R688 (/IMP) Q9IAK9 (/IMP) |
Skeletal system morphogenesis GO:0048705
The process in which the anatomical structures of the skeleton are generated and organized.
|
3 | O93288 (/ISS) P70325 (/ISS) Q861Q9 (/ISS) |
Cardiac muscle cell differentiation GO:0055007
The process in which a cardiac muscle precursor cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction.
|
3 | P70326 (/IGI) P70326 (/IGI) Q9IAK8 (/IGI) |
Retina morphogenesis in camera-type eye GO:0060042
The process in which the anatomical structure of the retina is generated and organized.
|
3 | E3W6T6 (/IGI) G1K2W9 (/IGI) Q9IAK8 (/IGI) |
Bundle of His development GO:0003166
The process whose specific outcome is the progression of the bundle of His over time, from its formation to the mature structure. The bundle of His is part of the His-Purkinje system that transmits signals from the AV node to the cardiac Purkinje fibers.
|
2 | P70326 (/IGI) P70326 (/IGI) |
Atrioventricular valve morphogenesis GO:0003181
The process in which the structure of the atrioventricular valve is generated and organized.
|
2 | P70326 (/IGI) P70326 (/IGI) |
Endocardial cushion development GO:0003197
The progression of a cardiac cushion over time, from its initial formation to the mature structure. The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves.
|
2 | P70326 (/IGI) P70326 (/IGI) |
Cardiac left ventricle formation GO:0003218
The developmental process pertaining to the initial formation of a left cardiac ventricle from unspecified parts.
|
2 | Q9PWE8 (/IEP) Q9PWE8 (/IEP) |
Cardiac left ventricle formation GO:0003218
The developmental process pertaining to the initial formation of a left cardiac ventricle from unspecified parts.
|
2 | P70326 (/IMP) P70326 (/IMP) |
Ventricular cardiac muscle tissue development GO:0003229
The process whose specific outcome is the progression of ventricular cardiac muscle over time, from its formation to the mature structure.
|
2 | P70326 (/IGI) P70326 (/IGI) |
Ventricular septum development GO:0003281
The progression of the ventricular septum over time from its formation to the mature structure.
|
2 | Q9PWE8 (/IEP) Q9PWE8 (/IEP) |
Ventricular septum development GO:0003281
The progression of the ventricular septum over time from its formation to the mature structure.
|
2 | P70326 (/IMP) P70326 (/IMP) |
Atrial septum development GO:0003283
The progression of the atrial septum over time, from its initial formation to the mature structure.
|
2 | P70326 (/IMP) P70326 (/IMP) |
Cell-cell signaling GO:0007267
Any process that mediates the transfer of information from one cell to another. This process includes signal transduction in the receiving cell and, where applicable, release of a ligand and any processes that actively facilitate its transport and presentation to the receiving cell. Examples include signaling via soluble ligands, via cell adhesion molecules and via gap junctions.
|
2 | P70326 (/ISO) P70326 (/ISO) |
Pattern specification process GO:0007389
Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate.
|
2 | P70326 (/IMP) P70326 (/IMP) |
Heart development GO:0007507
The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood.
|
2 | P70326 (/ISO) P70326 (/ISO) |
Heart development GO:0007507
The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood.
|
2 | Q9PWE8 (/TAS) Q9PWE8 (/TAS) |
Negative regulation of cell population proliferation GO:0008285
Any process that stops, prevents or reduces the rate or extent of cell proliferation.
|
2 | P70326 (/ISO) P70326 (/ISO) |
Embryonic limb morphogenesis GO:0030326
The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. A limb is an appendage of an animal used for locomotion or grasping.
|
2 | P70326 (/IGI) P70326 (/IGI) |
Embryonic limb morphogenesis GO:0030326
The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. A limb is an appendage of an animal used for locomotion or grasping.
|
2 | P70326 (/ISO) P70326 (/ISO) |
Negative regulation of cell migration GO:0030336
Any process that stops, prevents, or reduces the frequency, rate or extent of cell migration.
|
2 | P70326 (/ISO) P70326 (/ISO) |
Response to retinoic acid GO:0032526
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a retinoic acid stimulus.
|
2 | Q9PWE8 (/TAS) Q9PWE8 (/TAS) |
Embryonic forelimb morphogenesis GO:0035115
The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. The forelimbs are the front limbs of an animal, e.g. the arms of a human.
|
2 | P70326 (/ISO) P70326 (/ISO) |
Forelimb morphogenesis GO:0035136
The process in which the anatomical structures of the forelimb are generated and organized. The forelimbs are the front limbs of an animal, e.g. the arms of a human.
|
2 | P70326 (/ISO) P70326 (/ISO) |
Hindlimb morphogenesis GO:0035137
The process in which the anatomical structures of the hindlimb are generated and organized.
|
2 | Q9PWE8 (/TAS) Q9PWE8 (/TAS) |
Positive regulation of transcription, DNA-templated GO:0045893
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
|
2 | P70326 (/ISO) P70326 (/ISO) |
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
|
2 | P70326 (/IGI) P70326 (/IGI) |
Positive regulation of transcription by RNA polymerase II GO:0045944
Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
|
2 | P70326 (/ISO) P70326 (/ISO) |
Positive regulation of cardioblast differentiation GO:0051891
Any process that activates or increases the frequency, rate or extent of cardioblast differentiation, the process in which a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.
|
2 | P70326 (/ISO) P70326 (/ISO) |
Cardiac muscle cell differentiation GO:0055007
The process in which a cardiac muscle precursor cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction.
|
2 | P70326 (/IMP) P70326 (/IMP) |
Pericardium development GO:0060039
The process whose specific outcome is the progression of the pericardium over time, from its formation to the mature structure. The pericardium is a double-walled sac that contains the heart and the roots of the aorta, vena cava and the pulmonary artery.
|
2 | P70326 (/ISO) P70326 (/ISO) |
Negative regulation of cardiac muscle cell proliferation GO:0060044
Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle cell proliferation.
|
2 | P70326 (/ISO) P70326 (/ISO) |
Positive regulation of cardiac muscle cell proliferation GO:0060045
Any process that activates or increases the frequency, rate or extent of cardiac muscle cell proliferation.
|
2 | P70326 (/IGI) P70326 (/IGI) |
Limb development GO:0060173
The process whose specific outcome is the progression of a limb over time, from its formation to the mature structure. A limb is an appendage of an animal used for locomotion or grasping. Examples include legs, arms or some types of fin.
|
2 | Q9PWE8 (/TAS) Q9PWE8 (/TAS) |
Transdifferentiation GO:0060290
The conversion of a differentiated cell of one fate into a differentiated cell of another fate without first undergoing cell division or reversion to a more primitive or stem cell-like fate.
|
2 | P70326 (/ISO) P70326 (/ISO) |
Atrial septum morphogenesis GO:0060413
The developmental process in which atrial septum is generated and organized. The atrial septum separates the upper chambers (the atria) of the heart from one another.
|
2 | P70326 (/IGI) P70326 (/IGI) |
Positive regulation of secondary heart field cardioblast proliferation GO:0072513
Any process that activates or increases the frequency, rate or extent of cardioblast proliferation in the second heart field. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating. The secondary heart field is the region of the heart that will form the majority of the mesodermal component of the right ventricle, the arterial pole (outflow tract) and the venous pole (inflow tract).
|
2 | P70326 (/IMP) P70326 (/IMP) |
Angiogenesis GO:0001525
Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels.
|
1 | P70325 (/IMP) |
Heart morphogenesis GO:0003007
The developmental process in which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood.
|
1 | Q9IAK8 (/IGI) |
Embryonic heart tube morphogenesis GO:0003143
The process in which the anatomical structures of the embryonic heart tube are generated and organized. The embryonic heart tube is an epithelial tube that will give rise to the mature heart.
|
1 | Q9IAK8 (/IGI) |
Embryonic heart tube morphogenesis GO:0003143
The process in which the anatomical structures of the embryonic heart tube are generated and organized. The embryonic heart tube is an epithelial tube that will give rise to the mature heart.
|
1 | Q9IAK8 (/IMP) |
Atrioventricular valve formation GO:0003190
The developmental process pertaining to the initial formation of the atrioventricular valve from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable.
|
1 | Q9IAK8 (/IMP) |
Atrial ventricular junction remodeling GO:0003294
The reorganization or renovation of heart tissue that contributes to the maturation of the connection between an atrium and a ventricle.
|
1 | Q9IAK8 (/IMP) |
Proepicardium development GO:0003342
The progression of the proepicardium from its formation to the mature structure. The proepicardium is an outpouching of the septum transversum.
|
1 | Q9IAK8 (/IMP) |
Pericardium morphogenesis GO:0003344
The process in which the anatomical structure of the pericardium is generated and organized.
|
1 | Q9IAK8 (/IMP) |
Transcription, DNA-templated GO:0006351
The cellular synthesis of RNA on a template of DNA.
|
1 | Q9IAK8 (/IMP) |
Regulation of transcription, DNA-templated GO:0006355
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
|
1 | P57082 (/NAS) |
Multicellular organism development GO:0007275
The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).
|
1 | P57082 (/NAS) |
Heart development GO:0007507
The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood.
|
1 | Q9IAK8 (/IGI) |
Animal organ morphogenesis GO:0009887
Morphogenesis of an animal organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.
|
1 | Q9IAK8 (/IMP) |
Embryonic heart tube development GO:0035050
The process whose specific outcome is the progression of the embryonic heart tube over time, from its formation to the mature structure. The heart tube forms as the heart rudiment from the heart field.
|
1 | Q9IAK8 (/IMP) |
Limb morphogenesis GO:0035108
The process in which the anatomical structures of a limb are generated and organized. A limb is a paired appendage of a tetrapod used for locomotion or grasping.
|
1 | P70325 (/IDA) |
Limb morphogenesis GO:0035108
The process in which the anatomical structures of a limb are generated and organized. A limb is a paired appendage of a tetrapod used for locomotion or grasping.
|
1 | P57082 (/IMP) |
Limb morphogenesis GO:0035108
The process in which the anatomical structures of a limb are generated and organized. A limb is a paired appendage of a tetrapod used for locomotion or grasping.
|
1 | P70325 (/ISO) |
Embryonic pectoral fin morphogenesis GO:0035118
The process, occurring in the embryo, by which the anatomical structures of the pectoral fin are generated and organized. Pectoral fins are bilaterally paired fins mounted laterally and located behind the gill covers of fish. These fins are used for lateral mobility and propulsion.
|
1 | Q9IAK8 (/IMP) |
Forelimb morphogenesis GO:0035136
The process in which the anatomical structures of the forelimb are generated and organized. The forelimbs are the front limbs of an animal, e.g. the arms of a human.
|
1 | O93288 (/TAS) |
Pectoral fin morphogenesis GO:0035138
The process in which the anatomical structures of the pectoral fin are generated and organized. Pectoral fins are bilaterally paired fins mounted laterally and located behind the gill covers of fish. These fins are used for lateral mobility and propulsion.
|
1 | Q9IAK8 (/IMP) |
Atrioventricular canal development GO:0036302
The progression of the atrioventricular canal over time, from its formation to the mature structure. The atrioventricular canal is the part of the heart connecting the atrium to the cardiac ventricle.
|
1 | Q9IAK8 (/IGI) |
Positive regulation of transcription, DNA-templated GO:0045893
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
|
1 | Q9IAK8 (/IMP) |
Skeletal system morphogenesis GO:0048705
The process in which the anatomical structures of the skeleton are generated and organized.
|
1 | P57082 (/IMP) |
Skeletal system morphogenesis GO:0048705
The process in which the anatomical structures of the skeleton are generated and organized.
|
1 | P70325 (/ISO) |
Transdifferentiation GO:0060290
The conversion of a differentiated cell of one fate into a differentiated cell of another fate without first undergoing cell division or reversion to a more primitive or stem cell-like fate.
|
1 | Q5I2P1 (/IMP) |
There are 18 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
15 |
O93288 (/IDA)
P70326 (/IDA)
P70326 (/IDA)
Q5I2P1 (/IDA)
Q99593 (/IDA)
Q99593 (/IDA)
Q99593 (/IDA)
Q99593 (/IDA)
Q99593 (/IDA)
Q99593 (/IDA)
(5 more) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
11 |
O93288 (/IDA)
Q99593 (/IDA)
Q99593 (/IDA)
Q99593 (/IDA)
Q99593 (/IDA)
Q99593 (/IDA)
Q99593 (/IDA)
Q9PWE8 (/IDA)
Q9PWE8 (/IDA)
R9PXM9 (/IDA)
(1 more) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
8 | P70326 (/ISS) P70326 (/ISS) Q3SA47 (/ISS) Q5I2P1 (/ISS) Q9IAK8 (/ISS) Q9PWE8 (/ISS) Q9PWE8 (/ISS) Q9W7C2 (/ISS) |
Protein-containing complex GO:0032991
A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together.
|
8 | P70326 (/ISS) P70326 (/ISS) Q3SA47 (/ISS) Q5I2P1 (/ISS) Q9IAK8 (/ISS) Q9PWE8 (/ISS) Q9PWE8 (/ISS) Q9W7C2 (/ISS) |
Protein-DNA complex GO:0032993
A macromolecular complex containing both protein and DNA molecules.
|
8 | P70326 (/ISS) P70326 (/ISS) Q3SA47 (/ISS) Q5I2P1 (/ISS) Q9IAK8 (/ISS) Q9PWE8 (/ISS) Q9PWE8 (/ISS) Q9W7C2 (/ISS) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
7 | P70326 (/ISS) P70326 (/ISS) Q3SA47 (/ISS) Q5I2P1 (/ISS) Q9PWE8 (/ISS) Q9PWE8 (/ISS) Q9W7C2 (/ISS) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
6 | Q99593 (/TAS) Q99593 (/TAS) Q99593 (/TAS) Q99593 (/TAS) Q99593 (/TAS) Q99593 (/TAS) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
6 | Q99593 (/TAS) Q99593 (/TAS) Q99593 (/TAS) Q99593 (/TAS) Q99593 (/TAS) Q99593 (/TAS) |
Protein-containing complex GO:0032991
A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together.
|
6 | Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) |
Protein-DNA complex GO:0032993
A macromolecular complex containing both protein and DNA molecules.
|
6 | Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) Q99593 (/IDA) |
Stress fiber GO:0001725
A contractile actin filament bundle that consists of short actin filaments with alternating polarity, cross-linked by alpha-actinin and possibly other actin bundling proteins, and with myosin present in a periodic distribution along the fiber.
|
5 | O93288 (/IDA) Q9PWE8 (/IDA) Q9PWE8 (/IDA) R9PXM9 (/IDA) R9PXM9 (/IDA) |
Actin filament GO:0005884
A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane.
|
5 | O93288 (/IDA) Q9PWE8 (/IDA) Q9PWE8 (/IDA) R9PXM9 (/IDA) R9PXM9 (/IDA) |
Actin cytoskeleton GO:0015629
The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes.
|
4 | Q9PWE8 (/IDA) Q9PWE8 (/IDA) R9PXM9 (/IDA) R9PXM9 (/IDA) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
2 | P70326 (/ISO) P70326 (/ISO) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
2 | P70326 (/ISO) P70326 (/ISO) |
Protein-containing complex GO:0032991
A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together.
|
2 | P70326 (/ISO) P70326 (/ISO) |
Protein-DNA complex GO:0032993
A macromolecular complex containing both protein and DNA molecules.
|
2 | P70326 (/ISO) P70326 (/ISO) |
Actin cytoskeleton GO:0015629
The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes.
|
1 | Q9IAK8 (/IPI) |