The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"Immunoglobulins
".
FunFam 32: palladin isoform X1
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 8 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
6 | Q86TC9 (/IPI) Q86TC9 (/IPI) Q86TC9 (/IPI) Q8WX93 (/IPI) Q8WX93 (/IPI) Q8WX93 (/IPI) |
Cytoskeletal protein binding GO:0008092
Interacting selectively and non-covalently with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton).
|
6 | Q5DTJ9 (/ISO) Q5DTJ9 (/ISO) Q5DTJ9 (/ISO) Q9ET54 (/ISO) Q9ET54 (/ISO) Q9ET54 (/ISO) |
Cytoskeletal protein binding GO:0008092
Interacting selectively and non-covalently with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton).
|
3 | Q86TC9 (/IPI) Q86TC9 (/IPI) Q86TC9 (/IPI) |
SH3 domain binding GO:0017124
Interacting selectively and non-covalently with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins.
|
3 | Q86TC9 (/IPI) Q86TC9 (/IPI) Q86TC9 (/IPI) |
SH3 domain binding GO:0017124
Interacting selectively and non-covalently with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins.
|
3 | Q5DTJ9 (/ISO) Q5DTJ9 (/ISO) Q5DTJ9 (/ISO) |
Muscle alpha-actinin binding GO:0051371
Interacting selectively and non-covalently with muscle isoforms of actinin. Muscle alpha-actinin isoforms are found in skeletal and cardiac muscle and are localized to the Z-disc.
|
3 | Q86TC9 (/IPI) Q86TC9 (/IPI) Q86TC9 (/IPI) |
Muscle alpha-actinin binding GO:0051371
Interacting selectively and non-covalently with muscle isoforms of actinin. Muscle alpha-actinin isoforms are found in skeletal and cardiac muscle and are localized to the Z-disc.
|
3 | Q5DTJ9 (/ISO) Q5DTJ9 (/ISO) Q5DTJ9 (/ISO) |
Muscle alpha-actinin binding GO:0051371
Interacting selectively and non-covalently with muscle isoforms of actinin. Muscle alpha-actinin isoforms are found in skeletal and cardiac muscle and are localized to the Z-disc.
|
3 | Q8WX93 (/TAS) Q8WX93 (/TAS) Q8WX93 (/TAS) |
There are 25 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Angiogenesis GO:0001525
Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels.
|
3 | A4JYG5 (/IMP) F1RE66 (/IMP) Q71B05 (/IMP) |
Positive regulation of cell-matrix adhesion GO:0001954
Any process that activates or increases the rate or extent of cell adhesion to an extracellular matrix.
|
3 | A4JYG5 (/IDA) F1RE66 (/IDA) Q71B05 (/IDA) |
Keratinocyte development GO:0003334
The process whose specific outcome is the progression of a keratinocyte over time, from its formation to the mature structure.
|
3 | Q9ET54 (/IMP) Q9ET54 (/IMP) Q9ET54 (/IMP) |
Epithelial cell morphogenesis GO:0003382
The change in form that occurs when an epithelial cell progresses from its initial formation to its mature state.
|
3 | Q9ET54 (/IMP) Q9ET54 (/IMP) Q9ET54 (/IMP) |
Cytoskeleton organization GO:0007010
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures.
|
3 | Q8WX93 (/NAS) Q8WX93 (/NAS) Q8WX93 (/NAS) |
Lamellipodium assembly GO:0030032
Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell.
|
3 | A4JYG5 (/IDA) F1RE66 (/IDA) Q71B05 (/IDA) |
Actin cytoskeleton organization GO:0030036
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins.
|
3 | Q9ET54 (/IMP) Q9ET54 (/IMP) Q9ET54 (/IMP) |
Regulation of cell migration GO:0030334
Any process that modulates the frequency, rate or extent of cell migration.
|
3 | A4JYG5 (/IMP) F1RE66 (/IMP) Q71B05 (/IMP) |
Neuron projection development GO:0031175
The process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites).
|
3 | Q9ET54 (/ISO) Q9ET54 (/ISO) Q9ET54 (/ISO) |
Ruffle organization GO:0031529
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a ruffle, a projection at the leading edge of a crawling cell.
|
3 | Q9ET54 (/ISO) Q9ET54 (/ISO) Q9ET54 (/ISO) |
Positive regulation of Rac protein signal transduction GO:0035022
Any process that activates or increases the frequency, rate or extent of Rac protein signal transduction.
|
3 | A4JYG5 (/IDA) F1RE66 (/IDA) Q71B05 (/IDA) |
Positive regulation of Rac protein signal transduction GO:0035022
Any process that activates or increases the frequency, rate or extent of Rac protein signal transduction.
|
3 | A4JYG5 (/IMP) F1RE66 (/IMP) Q71B05 (/IMP) |
Endothelial cell migration GO:0043542
The orderly movement of an endothelial cell into the extracellular matrix to form an endothelium.
|
3 | A4JYG5 (/IDA) F1RE66 (/IDA) Q71B05 (/IDA) |
Sarcomere organization GO:0045214
The myofibril assembly process that results in the organization of muscle actomyosin into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs.
|
3 | Q86TC9 (/IMP) Q86TC9 (/IMP) Q86TC9 (/IMP) |
Sarcomere organization GO:0045214
The myofibril assembly process that results in the organization of muscle actomyosin into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs.
|
3 | Q5DTJ9 (/ISO) Q5DTJ9 (/ISO) Q5DTJ9 (/ISO) |
Filopodium assembly GO:0046847
The assembly of a filopodium, a thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone.
|
3 | A4JYG5 (/IDA) F1RE66 (/IDA) Q71B05 (/IDA) |
Positive regulation of small GTPase mediated signal transduction GO:0051057
Any process that activates or increases the frequency, rate or extent of small GTPase mediated signal transduction.
|
3 | A4JYG5 (/IDA) F1RE66 (/IDA) Q71B05 (/IDA) |
Positive regulation of small GTPase mediated signal transduction GO:0051057
Any process that activates or increases the frequency, rate or extent of small GTPase mediated signal transduction.
|
3 | A4JYG5 (/IMP) F1RE66 (/IMP) Q71B05 (/IMP) |
Positive regulation of podosome assembly GO:0071803
Any process that activates or increases the rate or extent of podosome assembly.
|
3 | Q9ET54 (/ISO) Q9ET54 (/ISO) Q9ET54 (/ISO) |
Neuron migration GO:0001764
The characteristic movement of an immature neuron from germinal zones to specific positions where they will reside as they mature.
|
1 | Q801V8 (/IGI) |
Neuron migration GO:0001764
The characteristic movement of an immature neuron from germinal zones to specific positions where they will reside as they mature.
|
1 | Q801V8 (/IMP) |
Axonogenesis GO:0007409
De novo generation of a long process of a neuron, including the terminal branched region. Refers to the morphogenesis or creation of shape or form of the developing axon, which carries efferent (outgoing) action potentials from the cell body towards target cells.
|
1 | Q801V8 (/IMP) |
Central nervous system development GO:0007417
The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain and spinal cord. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord.
|
1 | Q801V8 (/IMP) |
Positive regulation of axon extension GO:0045773
Any process that activates or increases the frequency, rate or extent of axon extension.
|
1 | Q801V8 (/IMP) |
Axon extension involved in regeneration GO:0048677
Long distance growth of a single axon process involved in regeneration of the neuron.
|
1 | Q801V8 (/IMP) |
There are 28 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Z disc GO:0030018
Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached.
|
9 | D4A7X7 (/IDA) D4A7X7 (/IDA) D4A7X7 (/IDA) Q86TC9 (/IDA) Q86TC9 (/IDA) Q86TC9 (/IDA) Q8WX93 (/IDA) Q8WX93 (/IDA) Q8WX93 (/IDA) |
I band GO:0031674
A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end.
|
9 | D4A7X7 (/IDA) D4A7X7 (/IDA) D4A7X7 (/IDA) Q5DTJ9 (/IDA) Q5DTJ9 (/IDA) Q5DTJ9 (/IDA) Q86TC9 (/IDA) Q86TC9 (/IDA) Q86TC9 (/IDA) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
6 | D4A7X7 (/IDA) D4A7X7 (/IDA) D4A7X7 (/IDA) Q8WX93 (/IDA) Q8WX93 (/IDA) Q8WX93 (/IDA) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
6 | Q5DTJ9 (/ISO) Q5DTJ9 (/ISO) Q5DTJ9 (/ISO) Q9ET54 (/ISO) Q9ET54 (/ISO) Q9ET54 (/ISO) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
6 | Q86TC9 (/ISS) Q86TC9 (/ISS) Q86TC9 (/ISS) Q9ET54 (/ISS) Q9ET54 (/ISS) Q9ET54 (/ISS) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
6 | B2RTX2 (/IDA) B2RTX2 (/IDA) B2RTX2 (/IDA) Q8WX93 (/IDA) Q8WX93 (/IDA) Q8WX93 (/IDA) |
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
|
6 | B2RTX2 (/IDA) B2RTX2 (/IDA) B2RTX2 (/IDA) Q8WX93 (/IDA) Q8WX93 (/IDA) Q8WX93 (/IDA) |
Actin cytoskeleton GO:0015629
The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes.
|
6 | B2RTX2 (/IDA) B2RTX2 (/IDA) B2RTX2 (/IDA) Q8WX93 (/IDA) Q8WX93 (/IDA) Q8WX93 (/IDA) |
Z disc GO:0030018
Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached.
|
6 | Q5DTJ9 (/ISO) Q5DTJ9 (/ISO) Q5DTJ9 (/ISO) Q9ET54 (/ISO) Q9ET54 (/ISO) Q9ET54 (/ISO) |
Stress fiber GO:0001725
A contractile actin filament bundle that consists of short actin filaments with alternating polarity, cross-linked by alpha-actinin and possibly other actin bundling proteins, and with myosin present in a periodic distribution along the fiber.
|
3 | Q9ET54 (/ISO) Q9ET54 (/ISO) Q9ET54 (/ISO) |
Ruffle GO:0001726
Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork.
|
3 | Q9ET54 (/ISO) Q9ET54 (/ISO) Q9ET54 (/ISO) |
Podosome GO:0002102
An actin-rich adhesion structure characterized by formation upon cell substrate contact and localization at the substrate-attached part of the cell, contain an F-actin-rich core surrounded by a ring structure containing proteins such as vinculin and talin, and have a diameter of 0.5 mm.
|
3 | Q9ET54 (/ISO) Q9ET54 (/ISO) Q9ET54 (/ISO) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
3 | Q9ET54 (/ISO) Q9ET54 (/ISO) Q9ET54 (/ISO) |
Actin filament GO:0005884
A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane.
|
3 | Q8WX93 (/IDA) Q8WX93 (/IDA) Q8WX93 (/IDA) |
Actin filament GO:0005884
A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane.
|
3 | Q9ET54 (/ISO) Q9ET54 (/ISO) Q9ET54 (/ISO) |
Actin filament GO:0005884
A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane.
|
3 | Q9ET54 (/ISS) Q9ET54 (/ISS) Q9ET54 (/ISS) |
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
|
3 | Q9ET54 (/ISO) Q9ET54 (/ISO) Q9ET54 (/ISO) |
Focal adhesion GO:0005925
Small region on the surface of a cell that anchors the cell to the extracellular matrix and that forms a point of termination of actin filaments.
|
3 | Q8WX93 (/HDA) Q8WX93 (/HDA) Q8WX93 (/HDA) |
Actin cytoskeleton GO:0015629
The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes.
|
3 | Q9ET54 (/ISO) Q9ET54 (/ISO) Q9ET54 (/ISO) |
Integral component of membrane GO:0016021
The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
|
3 | A4JYG5 (/ISS) F1RE66 (/ISS) Q71B05 (/ISS) |
Lamellipodium GO:0030027
A thin sheetlike process extended by the leading edge of a migrating cell or extending cell process; contains a dense meshwork of actin filaments.
|
3 | Q8WX93 (/IDA) Q8WX93 (/IDA) Q8WX93 (/IDA) |
Lamellipodium GO:0030027
A thin sheetlike process extended by the leading edge of a migrating cell or extending cell process; contains a dense meshwork of actin filaments.
|
3 | Q9ET54 (/ISO) Q9ET54 (/ISO) Q9ET54 (/ISO) |
Filopodium GO:0030175
Thin, stiff, actin-based protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal or dendritic growth cone, or a dendritic shaft.
|
3 | Q9ET54 (/ISO) Q9ET54 (/ISO) Q9ET54 (/ISO) |
Axon GO:0030424
The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter.
|
3 | Q9ET54 (/ISO) Q9ET54 (/ISO) Q9ET54 (/ISO) |
Intrinsic component of plasma membrane GO:0031226
The component of the plasma membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.
|
3 | A4JYG5 (/IDA) F1RE66 (/IDA) Q71B05 (/IDA) |
I band GO:0031674
A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end.
|
3 | Q5DTJ9 (/ISO) Q5DTJ9 (/ISO) Q5DTJ9 (/ISO) |
Neuronal cell body GO:0043025
The portion of a neuron that includes the nucleus, but excludes cell projections such as axons and dendrites.
|
3 | Q9ET54 (/ISO) Q9ET54 (/ISO) Q9ET54 (/ISO) |
Axonal growth cone GO:0044295
The migrating motile tip of a growing nerve cell axon.
|
3 | Q9ET54 (/ISO) Q9ET54 (/ISO) Q9ET54 (/ISO) |