CATH Superfamily 2.60.120.200
The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.
FunFam 25: Xyloglucan endotransglucosylase/hydrolase
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 4 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Xyloglucan:xyloglucosyl transferase activity GO:0016762
Catalysis of the cleavage of a beta-(1->4) bond in the backbone of a xyloglucan and transfers the xyloglucanyl segment on to O-4 of the non-reducing terminal glucose residue of an acceptor, which can be a xyloglucan or an oligosaccharide of xyloglucan.
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19 |
B2KL34 (/IDA)
O80803 (/IDA)
O80803 (/IDA)
P24806 (/IDA)
P24806 (/IDA)
P24806 (/IDA)
Q38857 (/IDA)
Q38857 (/IDA)
Q8LDS2 (/IDA)
Q9FKL8 (/IDA)
(9 more) |
Xyloglucan:xyloglucosyl transferase activity GO:0016762
Catalysis of the cleavage of a beta-(1->4) bond in the backbone of a xyloglucan and transfers the xyloglucanyl segment on to O-4 of the non-reducing terminal glucose residue of an acceptor, which can be a xyloglucan or an oligosaccharide of xyloglucan.
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9 | Q38907 (/ISS) Q38907 (/ISS) Q39099 (/ISS) Q39099 (/ISS) Q8LDS2 (/ISS) Q8LDW9 (/ISS) Q8LDW9 (/ISS) Q8LDW9 (/ISS) Q9LJR7 (/ISS) |
Xyloglucan:xyloglucosyl transferase activity GO:0016762
Catalysis of the cleavage of a beta-(1->4) bond in the backbone of a xyloglucan and transfers the xyloglucanyl segment on to O-4 of the non-reducing terminal glucose residue of an acceptor, which can be a xyloglucan or an oligosaccharide of xyloglucan.
|
2 | Q39099 (/IMP) Q39099 (/IMP) |
Xyloglucan-specific endo-beta-1,4-glucanase activity GO:0033946
Catalysis of the reaction: xyloglucan + H2O = xyloglucan oligosaccharides. This reaction is the endohydrolysis of (1->4)-beta-D-glucosidic linkages in xyloglucan.
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1 | P93046 (/IDA) |
There are 27 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Xyloglucan metabolic process GO:0010411
The chemical reactions and pathways involving xyloglucan, the cross-linking glycan composed of (1->4)-beta-D-glucan backbone substituted at regular intervals with beta-D-xylosyl-(1->6) residues, which is present in the primary cell wall of most higher plants.
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9 | O80803 (/IDA) O80803 (/IDA) Q9FKL8 (/IDA) Q9FKL9 (/IDA) Q9FKL9 (/IDA) Q9M0D1 (/IDA) Q9M0D1 (/IDA) Q9M0D2 (/IDA) Q9M0D2 (/IDA) |
Response to brassinosteroid GO:0009741
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a brassinosteroid stimulus.
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5 | B2KL34 (/IEP) E3UZI7 (/IEP) E3UZI8 (/IEP) Q38857 (/IEP) Q38857 (/IEP) |
Response to mechanical stimulus GO:0009612
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mechanical stimulus.
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4 | Q38857 (/IEP) Q38857 (/IEP) Q39099 (/IEP) Q39099 (/IEP) |
Response to auxin GO:0009733
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an auxin stimulus.
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4 | Q38857 (/IEP) Q38857 (/IEP) Q39099 (/IEP) Q39099 (/IEP) |
Response to gibberellin GO:0009739
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gibberellin stimulus.
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3 | B2KL34 (/IEP) E3UZI7 (/IEP) E3UZI8 (/IEP) |
Plant-type cell wall loosening GO:0009828
The series of events causing chemical and structural alterations of an existing cellulose and pectin-containing cell wall that results in greater extensibility of the wall. An example of this is found in Arabidopsis thaliana.
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3 | P24806 (/TAS) P24806 (/TAS) P24806 (/TAS) |
Plant-type cell wall biogenesis GO:0009832
A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cellulose and pectin-containing cell wall. An example of this is found in Arabidopsis thaliana.
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3 | Q38907 (/ISS) Q38907 (/ISS) Q9LJR7 (/ISS) |
Cell wall macromolecule catabolic process GO:0016998
The chemical reactions and pathways resulting in the breakdown of macromolecules that form part of a cell wall.
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3 | P93046 (/IMP) Q9SJL9 (/IMP) Q9SJL9 (/IMP) |
Cellular response to auxin stimulus GO:0071365
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an auxin stimulus.
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3 | Q9FI31 (/IEP) Q9M0D1 (/IEP) Q9M0D1 (/IEP) |
Plant-type cell wall organization or biogenesis GO:0071669
A process that results in the biosynthesis of constituent macromolecules, assembly, arrangement of constituent parts, or disassembly of a cellulose- and pectin-containing cell wall.
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3 | P24806 (/IMP) P24806 (/IMP) P24806 (/IMP) |
Response to heat GO:0009408
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.
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2 | Q38857 (/IEP) Q38857 (/IEP) |
Response to cold GO:0009409
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.
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2 | Q38857 (/IEP) Q38857 (/IEP) |
Response to water deprivation GO:0009414
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water deprivation stimulus, prolonged deprivation of water.
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2 | Q8LF99 (/IEP) Q8LF99 (/IEP) |
Response to low light intensity stimulus GO:0009645
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a low light intensity stimulus. Low light intensity is defined as a level of electromagnetic radiation at or below 0.1 micromols/m2.
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2 | Q39099 (/IEP) Q39099 (/IEP) |
Plant-type cell wall organization GO:0009664
A process that results in the assembly and arrangement of constituent parts of the cellulose and pectin-containing cell wall, or in the disassembly of the cellulose and pectin-containing cell wall. This process is carried out at the cellular level. An example of this process is found in Arabidopsis thaliana.
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2 | Q38857 (/TAS) Q38857 (/TAS) |
Unidimensional cell growth GO:0009826
The process in which a cell irreversibly increases in size in one
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2 | Q39099 (/IMP) Q39099 (/IMP) |
Fruit development GO:0010154
The process whose specific outcome is the progression of the fruit over time, from its formation to the mature structure. The fruit is a reproductive body of a seed plant.
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2 | Q38909 (/IMP) Q38909 (/IMP) |
Response to far red light GO:0010218
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of far red light stimulus. Far red light is electromagnetic radiation of wavelength 700-800nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.
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2 | Q38911 (/IEP) Q38911 (/IEP) |
Cell wall modification GO:0042545
The series of events leading to chemical and structural alterations of an existing cell wall that can result in loosening, increased extensibility or disassembly.
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2 | Q9ZV40 (/IMP) Q9ZV40 (/IMP) |
Cell division GO:0051301
The process resulting in division and partitioning of components of a cell to form more cells; may or may not be accompanied by the physical separation of a cell into distinct, individually membrane-bounded daughter cells.
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2 | Q9M0D1 (/IMP) Q9M0D1 (/IMP) |
Primary root development GO:0080022
The process whose specific outcome is the progression of the primary root over time, from its formation to the mature structure. The primary root develops directly from the embryonic radicle.
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2 | Q9ZV40 (/IMP) Q9ZV40 (/IMP) |
Stamen filament development GO:0080086
The process whose specific outcome is the progression of the filament over time, from its formation to the mature structure. Filament is the stalk of a stamen.
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2 | Q38909 (/IMP) Q38909 (/IMP) |
Seed trichome elongation GO:0090378
The process in which a seed trichome irreversibly increases in size in one
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2 | B2KL33 (/IEP) B2KL34 (/IEP) |
Plant-type cell wall modification involved in multidimensional cell growth GO:0009831
The series of events that occur during cell growth that result in chemical or structural changes to existing cell walls of the type composed chiefly of cellulose and pectin. An example of this is found in Arabidopsis thaliana.
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1 | Q8LC45 (/IMP) |
Phloem or xylem histogenesis GO:0010087
The process whose specific outcome is the progression of phloem and/or xylem over time, from formation to the mature structure. An example of this process is found in Arabidopsis thaliana.
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1 | Q8LDS2 (/IMP) |
Cellulose metabolic process GO:0030243
The chemical reactions and pathways involving cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation.
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1 | Q9LJR7 (/IDA) |
Photoperiodism, flowering GO:0048573
A change from the vegetative to the reproductive phase as a result of detection of, or exposure to, a period of light or dark of a given length. The length of the period of light or dark required to initiate the change is set relative to a particular duration known as the 'critical day length'. The critical day length varies between species.
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1 | Q9LJR7 (/IMP) |
There are 10 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Cell wall GO:0005618
The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
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10 | P24806 (/IDA) P24806 (/IDA) P24806 (/IDA) Q38857 (/IDA) Q38857 (/IDA) Q38910 (/IDA) Q39099 (/IDA) Q39099 (/IDA) Q9FKL9 (/IDA) Q9FKL9 (/IDA) |
Golgi apparatus GO:0005794
A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions.
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8 | P24806 (/IDA) P24806 (/IDA) P24806 (/IDA) Q38857 (/IDA) Q38857 (/IDA) Q38910 (/IDA) Q9M0D2 (/IDA) Q9M0D2 (/IDA) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
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7 | P24806 (/IDA) P24806 (/IDA) P24806 (/IDA) Q39099 (/IDA) Q39099 (/IDA) Q9FKL9 (/IDA) Q9FKL9 (/IDA) |
Plant-type cell wall GO:0009505
A more or less rigid stucture lying outside the cell membrane of a cell and composed of cellulose and pectin and other organic and inorganic substances.
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7 | O80803 (/IDA) O80803 (/IDA) P24806 (/IDA) P24806 (/IDA) P24806 (/IDA) Q39099 (/IDA) Q39099 (/IDA) |
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
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3 | P24806 (/IDA) P24806 (/IDA) P24806 (/IDA) |
Extracellular region GO:0005576
The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
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2 | Q39099 (/IDA) Q39099 (/IDA) |
Plasmodesma GO:0009506
A fine cytoplasmic channel, found in all higher plants, that connects the cytoplasm of one cell to that of an adjacent cell.
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2 | Q39099 (/IDA) Q39099 (/IDA) |
Chloroplast GO:0009507
A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
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2 | Q39099 (/IDA) Q39099 (/IDA) |
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
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2 | Q39099 (/IDA) Q39099 (/IDA) |
Integral component of plasma membrane GO:0005887
The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
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1 | Q8LC45 (/IDA) |