CATH Superfamily 2.60.120.200
The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.
FunFam 130: Crumbs 2, cell polarity complex component
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 5 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
1 | Q80YA8 (/IPI) |
Aspartic-type endopeptidase inhibitor activity GO:0019828
Stops, prevents or reduces the activity of aspartic-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; the optimum reaction pH is below 5 due to an aspartic residue involved in the catalytic process.
|
1 | Q5IJ48 (/IMP) |
Aspartic-type endopeptidase inhibitor activity GO:0019828
Stops, prevents or reduces the activity of aspartic-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; the optimum reaction pH is below 5 due to an aspartic residue involved in the catalytic process.
|
1 | Q80YA8 (/ISO) |
Protein-containing complex binding GO:0044877
Interacting selectively and non-covalently with a macromolecular complex.
|
1 | Q5IJ48 (/IMP) |
Protein-containing complex binding GO:0044877
Interacting selectively and non-covalently with a macromolecular complex.
|
1 | Q80YA8 (/ISO) |
There are 44 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Mesoderm formation GO:0001707
The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts.
|
8 | D4A3W2 (/ISS) F1N2V0 (/ISS) F1SKU3 (/ISS) F7HE09 (/ISS) H0XLX5 (/ISS) H2R133 (/ISS) I3NFS4 (/ISS) Q5IJ48 (/ISS) |
Somitogenesis GO:0001756
The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo.
|
8 | D4A3W2 (/ISS) F1N2V0 (/ISS) F1SKU3 (/ISS) F7HE09 (/ISS) H0XLX5 (/ISS) H2R133 (/ISS) I3NFS4 (/ISS) Q5IJ48 (/ISS) |
Positive regulation of epithelial to mesenchymal transition GO:0010718
Any process that increases the rate, frequency, or extent of epithelial to mesenchymal transition. Epithelial to mesenchymal transition is where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.
|
8 | D4A3W2 (/ISS) F1N2V0 (/ISS) F1SKU3 (/ISS) F7HE09 (/ISS) H0XLX5 (/ISS) H2R133 (/ISS) I3NFS4 (/ISS) Q5IJ48 (/ISS) |
Notochord formation GO:0014028
The formation of the notochord from the chordamesoderm. The notochord is composed of large cells packed within a firm connective tissue sheath and is found in all chordates at the ventral surface of the neural tube. In vertebrates, the notochord contributes to the vertebral column.
|
8 | D4A3W2 (/ISS) F1N2V0 (/ISS) F1SKU3 (/ISS) F7HE09 (/ISS) H0XLX5 (/ISS) H2R133 (/ISS) I3NFS4 (/ISS) Q5IJ48 (/ISS) |
Positive regulation of BMP signaling pathway GO:0030513
Any process that activates or increases the frequency, rate or extent of BMP signaling pathway activity.
|
8 | D4A3W2 (/ISS) F1N2V0 (/ISS) F1SKU3 (/ISS) F7HE09 (/ISS) H0XLX5 (/ISS) H2R133 (/ISS) I3NFS4 (/ISS) Q5IJ48 (/ISS) |
Maintenance of epithelial cell apical/basal polarity GO:0045199
The maintenance of the apicobasal polarity of an epithelial cell.
|
8 | D4A3W2 (/ISS) F1N2V0 (/ISS) F1SKU3 (/ISS) F7HE09 (/ISS) H0XLX5 (/ISS) H2R133 (/ISS) I3NFS4 (/ISS) Q5IJ48 (/ISS) |
Cardiovascular system development GO:0072358
The process whose specific outcome is the progression of the cardiovascular system over time, from its formation to the mature structure. The cardiovascular system is the anatomical system that has as its parts the heart and blood vessels.
|
8 | D4A3W2 (/ISS) F1N2V0 (/ISS) F1SKU3 (/ISS) F7HE09 (/ISS) H0XLX5 (/ISS) H2R133 (/ISS) I3NFS4 (/ISS) Q5IJ48 (/ISS) |
Homophilic cell adhesion via plasma membrane adhesion molecules GO:0007156
The attachment of a plasma membrane adhesion molecule in one cell to an identical molecule in an adjacent cell.
|
5 | A0A0R4IBP9 (/IPI) B3DGM6 (/IPI) I3VKD7 (/IPI) Q1A5L1 (/IPI) Q1A5L2 (/IPI) |
Heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules GO:0007157
The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell.
|
5 | A0A0R4IBP9 (/IPI) B3DGM6 (/IPI) I3VKD7 (/IPI) Q1A5L1 (/IPI) Q1A5L2 (/IPI) |
Establishment or maintenance of epithelial cell apical/basal polarity GO:0045197
Any cellular process that results in the specification, formation or maintenance of the apicobasal polarity of an epithelial cell.
|
5 | A0A0R4IBP9 (/IGI) B3DGM6 (/IGI) I3VKD7 (/IGI) Q1A5L1 (/IGI) Q1A5L2 (/IGI) |
Cell-cell adhesion GO:0098609
The attachment of one cell to another cell via adhesion molecules.
|
5 | A0A0R4IBP9 (/IDA) B3DGM6 (/IDA) I3VKD7 (/IDA) Q1A5L1 (/IDA) Q1A5L2 (/IDA) |
Glomerular filtration GO:0003094
The process in which plasma is filtered through the glomerular membrane which consists of capillary endothelial cells, the basement membrane, and epithelial cells. The glomerular filtrate is the same as plasma except it has no significant amount of protein.
|
3 | A0A0R4IBP9 (/IMP) I3VKD7 (/IMP) Q1A5L1 (/IMP) |
Glomerulus development GO:0032835
The progression of the glomerulus over time from its initial formation until its mature state. The glomerulus is a capillary tuft which forms a close network with the visceral epithelium (podocytes) and the mesangium to form the filtration barrier and is surrounded by Bowman's capsule in nephrons of the vertebrate kidney. The glomerulus is part of the nephron and is restricted to one body segment.
|
3 | A0A0R4IBP9 (/IMP) I3VKD7 (/IMP) Q1A5L1 (/IMP) |
Slit diaphragm assembly GO:0036060
The aggregation, arrangement and bonding together of a set of components to form a slit diaphragm, specialized cell-cell junction found between the interdigitating foot processes of the glomerular epithelium (the podocytes) in the vertebrate kidney, which is adapted for facilitating glomerular filtration.
|
3 | A0A0R4IBP9 (/IMP) I3VKD7 (/IMP) Q1A5L1 (/IMP) |
Eye photoreceptor cell development GO:0042462
Development of a photoreceptor, a sensory cell in the eye that reacts to the presence of light. They usually contain a pigment that undergoes a chemical change when light is absorbed, thus stimulating a nerve.
|
3 | A0A0R4IBP9 (/IMP) I3VKD7 (/IMP) Q1A5L1 (/IMP) |
Photoreceptor cell maintenance GO:0045494
Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light.
|
3 | A0A0R4IBP9 (/IMP) I3VKD7 (/IMP) Q1A5L1 (/IMP) |
Pronephros development GO:0048793
The process whose specific outcome is the progression of the pronephros over time, from its formation to the mature structure. In mammals, the pronephros is the first of the three embryonic kidneys to be established and exists only transiently. In lower vertebrates such as fish and amphibia, the pronephros is the fully functional embryonic kidney and is indispensable for larval life.
|
3 | A0A0R4IBP9 (/IMP) I3VKD7 (/IMP) Q1A5L1 (/IMP) |
Retina morphogenesis in camera-type eye GO:0060042
The process in which the anatomical structure of the retina is generated and organized.
|
3 | A0A0R4IBP9 (/IMP) I3VKD7 (/IMP) Q1A5L1 (/IMP) |
Cilium assembly GO:0060271
The assembly of a cilium, a specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole.
|
3 | A0A0R4IBP9 (/IMP) I3VKD7 (/IMP) Q1A5L1 (/IMP) |
Glomerular visceral epithelial cell development GO:0072015
The process whose specific outcome is the progression of a glomerular visceral epithelial cell over time, from its formation to the mature structure. A glomerular visceral epithelial cell is a specialized epithelial cell that contains \feet\ that interdigitate with the \feet\ of other glomerular epithelial cells.
|
3 | A0A0R4IBP9 (/IMP) I3VKD7 (/IMP) Q1A5L1 (/IMP) |
Glomerular capillary formation GO:0072104
The process that gives rise to a glomerular capillary. This process pertains to the initial formation of a structure from unspecified parts.
|
3 | A0A0R4IBP9 (/IMP) I3VKD7 (/IMP) Q1A5L1 (/IMP) |
Regulation of non-motile cilium assembly GO:1902855
Any process that modulates the frequency, rate or extent of non-motile cilium assembly.
|
3 | A0A0R4IBP9 (/IGI) I3VKD7 (/IGI) Q1A5L1 (/IGI) |
Regulation of non-motile cilium assembly GO:1902855
Any process that modulates the frequency, rate or extent of non-motile cilium assembly.
|
3 | A0A0R4IBP9 (/IMP) I3VKD7 (/IMP) Q1A5L1 (/IMP) |
Brain development GO:0007420
The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. Brain development begins with patterning events in the neural tube and ends with the mature structure that is the center of thought and emotion. The brain is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.).
|
2 | B3DGM6 (/IMP) Q1A5L2 (/IMP) |
Ventricular system development GO:0021591
The process whose specific outcome is the progression of the brain ventricular system over time, from its formation to the mature structure. The brain ventricular system consists of four communicating cavities within the brain that are continuous with the central canal of the spinal cord. These cavities include two lateral ventricles, the third ventricle and the fourth ventricle. Cerebrospinal fluid fills the ventricles and is produced by the choroid plexus.
|
2 | B3DGM6 (/IMP) Q1A5L2 (/IMP) |
Camera-type eye development GO:0043010
The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field.
|
2 | B3DGM6 (/IMP) Q1A5L2 (/IMP) |
Apical protein localization GO:0045176
Any process in which a protein is transported to, or maintained in, apical regions of the cell.
|
2 | B3DGM6 (/IGI) Q1A5L2 (/IGI) |
Establishment or maintenance of epithelial cell apical/basal polarity GO:0045197
Any cellular process that results in the specification, formation or maintenance of the apicobasal polarity of an epithelial cell.
|
2 | B3DGM6 (/IMP) Q1A5L2 (/IMP) |
Negative regulation of Notch signaling pathway GO:0045746
Any process that stops, prevents, or reduces the frequency, rate or extent of the Notch signaling pathway.
|
2 | B3DGM6 (/IEP) Q1A5L2 (/IEP) |
Embryonic retina morphogenesis in camera-type eye GO:0060059
The process in which the anatomical structure of the retina is generated and organized in a camera-type eye during the embryonic life stage.
|
2 | B3DGM6 (/IMP) Q1A5L2 (/IMP) |
Cell-cell adhesion GO:0098609
The attachment of one cell to another cell via adhesion molecules.
|
2 | B3DGM6 (/IMP) Q1A5L2 (/IMP) |
Mesoderm formation GO:0001707
The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts.
|
1 | Q80YA8 (/IMP) |
Somitogenesis GO:0001756
The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo.
|
1 | Q80YA8 (/IMP) |
Regulation of gastrulation GO:0010470
Any process that modulates the rate or extent of gastrulation. Gastrulation is the complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals.
|
1 | Q80YA8 (/IMP) |
Regulation of gastrulation GO:0010470
Any process that modulates the rate or extent of gastrulation. Gastrulation is the complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals.
|
1 | Q5IJ48 (/ISS) |
Positive regulation of epithelial to mesenchymal transition GO:0010718
Any process that increases the rate, frequency, or extent of epithelial to mesenchymal transition. Epithelial to mesenchymal transition is where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.
|
1 | Q80YA8 (/IMP) |
Negative regulation of endopeptidase activity GO:0010951
Any process that decreases the frequency, rate or extent of endopeptidase activity, the endohydrolysis of peptide bonds within proteins.
|
1 | Q5IJ48 (/IMP) |
Negative regulation of endopeptidase activity GO:0010951
Any process that decreases the frequency, rate or extent of endopeptidase activity, the endohydrolysis of peptide bonds within proteins.
|
1 | Q80YA8 (/ISO) |
Notochord formation GO:0014028
The formation of the notochord from the chordamesoderm. The notochord is composed of large cells packed within a firm connective tissue sheath and is found in all chordates at the ventral surface of the neural tube. In vertebrates, the notochord contributes to the vertebral column.
|
1 | Q80YA8 (/IMP) |
Positive regulation of BMP signaling pathway GO:0030513
Any process that activates or increases the frequency, rate or extent of BMP signaling pathway activity.
|
1 | Q80YA8 (/IMP) |
Maintenance of epithelial cell apical/basal polarity GO:0045199
The maintenance of the apicobasal polarity of an epithelial cell.
|
1 | Q80YA8 (/IMP) |
Ingression involved in gastrulation with mouth forming second GO:0055111
The migration of individual cells into the embryo involved in deuterostomic gastrulation.
|
1 | Q80YA8 (/IMP) |
Ingression involved in gastrulation with mouth forming second GO:0055111
The migration of individual cells into the embryo involved in deuterostomic gastrulation.
|
1 | Q5IJ48 (/ISS) |
Cardiovascular system development GO:0072358
The process whose specific outcome is the progression of the cardiovascular system over time, from its formation to the mature structure. The cardiovascular system is the anatomical system that has as its parts the heart and blood vessels.
|
1 | Q80YA8 (/IMP) |
There are 7 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
|
5 | A0A0R4IBP9 (/IDA) B3DGM6 (/IDA) I3VKD7 (/IDA) Q1A5L1 (/IDA) Q1A5L2 (/IDA) |
Protein-containing complex GO:0032991
A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together.
|
5 | A0A0R4IBP9 (/IPI) B3DGM6 (/IPI) I3VKD7 (/IPI) Q1A5L1 (/IPI) Q1A5L2 (/IPI) |
Apical plasma membrane GO:0016324
The region of the plasma membrane located at the apical end of the cell.
|
1 | Q80YA8 (/IDA) |
Apical plasma membrane GO:0016324
The region of the plasma membrane located at the apical end of the cell.
|
1 | Q5IJ48 (/ISS) |
Protein-containing complex GO:0032991
A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together.
|
1 | Q5IJ48 (/IDA) |
Protein-containing complex GO:0032991
A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together.
|
1 | Q80YA8 (/ISO) |
Extracellular exosome GO:0070062
A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
|
1 | Q5IJ48 (/HDA) |