CATH Superfamily 2.40.50.40
The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.
FunFam 9: chromobox protein homolog 1
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 30 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
188 |
P23198 (/IPI)
P45973 (/IPI)
P45973 (/IPI)
P45973 (/IPI)
P45973 (/IPI)
P45973 (/IPI)
P45973 (/IPI)
P45973 (/IPI)
P45973 (/IPI)
P45973 (/IPI)
(178 more) |
Protein domain specific binding GO:0019904
Interacting selectively and non-covalently with a specific domain of a protein.
|
141 |
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
(131 more) |
Identical protein binding GO:0042802
Interacting selectively and non-covalently with an identical protein or proteins.
|
116 |
P45973 (/IPI)
P45973 (/IPI)
P45973 (/IPI)
P45973 (/IPI)
P45973 (/IPI)
P45973 (/IPI)
P45973 (/IPI)
P45973 (/IPI)
P45973 (/IPI)
P45973 (/IPI)
(106 more) |
Enzyme binding GO:0019899
Interacting selectively and non-covalently with any enzyme.
|
87 |
P83916 (/IPI)
P83916 (/IPI)
P83916 (/IPI)
P83916 (/IPI)
P83916 (/IPI)
P83916 (/IPI)
P83916 (/IPI)
P83916 (/IPI)
P83916 (/IPI)
P83916 (/IPI)
(77 more) |
Histone methyltransferase binding GO:1990226
Interacting selectively and non-covalently with a histone methyltransferase enzyme.
|
87 |
P83916 (/IPI)
P83916 (/IPI)
P83916 (/IPI)
P83916 (/IPI)
P83916 (/IPI)
P83916 (/IPI)
P83916 (/IPI)
P83916 (/IPI)
P83916 (/IPI)
P83916 (/IPI)
(77 more) |
Protein domain specific binding GO:0019904
Interacting selectively and non-covalently with a specific domain of a protein.
|
47 |
Q13185 (/IPI)
Q13185 (/IPI)
Q13185 (/IPI)
Q13185 (/IPI)
Q13185 (/IPI)
Q13185 (/IPI)
Q13185 (/IPI)
Q13185 (/IPI)
Q13185 (/IPI)
Q13185 (/IPI)
(37 more) |
Protein homodimerization activity GO:0042803
Interacting selectively and non-covalently with an identical protein to form a homodimer.
|
42 |
P83917 (/IPI)
P83917 (/IPI)
P83917 (/IPI)
P83917 (/IPI)
P83917 (/IPI)
P83917 (/IPI)
P83917 (/IPI)
P83917 (/IPI)
P83917 (/IPI)
P83917 (/IPI)
(32 more) |
Enzyme binding GO:0019899
Interacting selectively and non-covalently with any enzyme.
|
41 |
P23198 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
(31 more) |
Histone methyltransferase binding GO:1990226
Interacting selectively and non-covalently with a histone methyltransferase enzyme.
|
41 |
P23198 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
(31 more) |
Chromatin binding GO:0003682
Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.
|
40 |
P83916 (/TAS)
P83916 (/TAS)
P83916 (/TAS)
P83916 (/TAS)
P83916 (/TAS)
P83916 (/TAS)
P83916 (/TAS)
P83916 (/TAS)
P83916 (/TAS)
P83916 (/TAS)
(30 more) |
Protein binding, bridging GO:0030674
The binding activity of a molecule that brings together two or more protein molecules, or a protein and another macromolecule or complex, through a selective, non-covalent, often stoichiometric interaction, permitting those molecules to function in a coordinated way.
|
29 |
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
(19 more) |
Methylated histone binding GO:0035064
Interacting selectively and non-covalently with a histone in which a residue has been modified by methylation. Histones are any of a group of water-soluble proteins found in association with the DNA of eukaroytic chromosomes.
|
29 |
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
(19 more) |
Ribonucleoprotein complex binding GO:0043021
Interacting selectively and non-covalently with any complex of RNA and protein.
|
29 |
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
(19 more) |
Protein-containing complex binding GO:0044877
Interacting selectively and non-covalently with a macromolecular complex.
|
29 |
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
(19 more) |
Repressing transcription factor binding GO:0070491
Interacting selectively and non-covalently with a transcription repressor, any protein whose activity is required to prevent or downregulate transcription.
|
29 |
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
(19 more) |
Actin binding GO:0003779
Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments.
|
4 | O93480 (/IPI) O93480 (/IPI) O93480 (/IPI) O93480 (/IPI) |
Identical protein binding GO:0042802
Interacting selectively and non-covalently with an identical protein or proteins.
|
3 | P23198 (/ISO) Q61686 (/ISO) Q61686 (/ISO) |
Chromatin binding GO:0003682
Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.
|
2 | Q61686 (/IDA) Q61686 (/IDA) |
Protein binding, bridging GO:0030674
The binding activity of a molecule that brings together two or more protein molecules, or a protein and another macromolecule or complex, through a selective, non-covalent, often stoichiometric interaction, permitting those molecules to function in a coordinated way.
|
2 | Q61686 (/IPI) Q61686 (/IPI) |
Methylated histone binding GO:0035064
Interacting selectively and non-covalently with a histone in which a residue has been modified by methylation. Histones are any of a group of water-soluble proteins found in association with the DNA of eukaroytic chromosomes.
|
2 | Q61686 (/IPI) Q61686 (/IPI) |
Methylated histone binding GO:0035064
Interacting selectively and non-covalently with a histone in which a residue has been modified by methylation. Histones are any of a group of water-soluble proteins found in association with the DNA of eukaroytic chromosomes.
|
2 | Q61686 (/ISO) Q61686 (/ISO) |
Methylated histone binding GO:0035064
Interacting selectively and non-covalently with a histone in which a residue has been modified by methylation. Histones are any of a group of water-soluble proteins found in association with the DNA of eukaroytic chromosomes.
|
2 | Q61686 (/ISS) Q61686 (/ISS) |
Histone deacetylase binding GO:0042826
Interacting selectively and non-covalently with the enzyme histone deacetylase.
|
2 | Q61686 (/IPI) Q61686 (/IPI) |
Ribonucleoprotein complex binding GO:0043021
Interacting selectively and non-covalently with any complex of RNA and protein.
|
2 | Q61686 (/ISO) Q61686 (/ISO) |
Ribonucleoprotein complex binding GO:0043021
Interacting selectively and non-covalently with any complex of RNA and protein.
|
2 | Q61686 (/ISS) Q61686 (/ISS) |
Protein-containing complex binding GO:0044877
Interacting selectively and non-covalently with a macromolecular complex.
|
2 | Q61686 (/ISO) Q61686 (/ISO) |
Protein-containing complex binding GO:0044877
Interacting selectively and non-covalently with a macromolecular complex.
|
2 | Q61686 (/ISS) Q61686 (/ISS) |
Repressing transcription factor binding GO:0070491
Interacting selectively and non-covalently with a transcription repressor, any protein whose activity is required to prevent or downregulate transcription.
|
2 | Q61686 (/IPI) Q61686 (/IPI) |
Transcription regulatory region sequence-specific DNA binding GO:0000976
Interacting selectively and non-covalently with a specific sequence of DNA that is part of a regulatory region that controls transcription of that section of the DNA. The transcribed region might be described as a gene, cistron, or operon.
|
1 | P23198 (/IDA) |
Protein domain specific binding GO:0019904
Interacting selectively and non-covalently with a specific domain of a protein.
|
1 | P23198 (/ISO) |
There are 14 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Negative regulation of transcription, DNA-templated GO:0045892
Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.
|
141 |
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
(131 more) |
Negative regulation of transcription, DNA-templated GO:0045892
Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.
|
119 |
P23198 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
(109 more) |
Cellular response to DNA damage stimulus GO:0006974
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism.
|
116 |
P45973 (/IMP)
P45973 (/IMP)
P45973 (/IMP)
P45973 (/IMP)
P45973 (/IMP)
P45973 (/IMP)
P45973 (/IMP)
P45973 (/IMP)
P45973 (/IMP)
P45973 (/IMP)
(106 more) |
Cellular response to DNA damage stimulus GO:0006974
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism.
|
90 |
P23198 (/ISS)
P83917 (/ISS)
P83917 (/ISS)
P83917 (/ISS)
P83917 (/ISS)
P83917 (/ISS)
P83917 (/ISS)
P83917 (/ISS)
P83917 (/ISS)
P83917 (/ISS)
(80 more) |
Negative regulation of transcription, DNA-templated GO:0045892
Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.
|
76 |
P45973 (/IMP)
P45973 (/IMP)
P45973 (/IMP)
P45973 (/IMP)
P45973 (/IMP)
P45973 (/IMP)
P45973 (/IMP)
P45973 (/IMP)
P45973 (/IMP)
P45973 (/IMP)
(66 more) |
Negative regulation of G0 to G1 transition GO:0070317
A cell cycle process that stops, prevents, or reduces the rate or extent of the transition from the G0 quiescent state to the G1 phase.
|
76 |
P45973 (/TAS)
P45973 (/TAS)
P45973 (/TAS)
P45973 (/TAS)
P45973 (/TAS)
P45973 (/TAS)
P45973 (/TAS)
P45973 (/TAS)
P45973 (/TAS)
P45973 (/TAS)
(66 more) |
Chromatin remodeling GO:0006338
Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation.
|
47 |
Q13185 (/NAS)
Q13185 (/NAS)
Q13185 (/NAS)
Q13185 (/NAS)
Q13185 (/NAS)
Q13185 (/NAS)
Q13185 (/NAS)
Q13185 (/NAS)
Q13185 (/NAS)
Q13185 (/NAS)
(37 more) |
Cellular response to dexamethasone stimulus GO:0071549
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dexamethasone stimulus.
|
47 |
Q5RJK5 (/IEP)
Q5RJK5 (/IEP)
Q5RJK5 (/IEP)
Q5RJK5 (/IEP)
Q5RJK5 (/IEP)
Q5RJK5 (/IEP)
Q5RJK5 (/IEP)
Q5RJK5 (/IEP)
Q5RJK5 (/IEP)
Q5RJK5 (/IEP)
(37 more) |
Cellular response to DNA damage stimulus GO:0006974
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism.
|
43 |
P23198 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
(33 more) |
Negative regulation of transcription by RNA polymerase II GO:0000122
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II.
|
29 |
P45973 (/IMP)
P45973 (/IMP)
P45973 (/IMP)
P45973 (/IMP)
P45973 (/IMP)
P45973 (/IMP)
P45973 (/IMP)
P45973 (/IMP)
P45973 (/IMP)
P45973 (/IMP)
(19 more) |
Blood coagulation GO:0007596
The sequential process in which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers.
|
29 |
P45973 (/TAS)
P45973 (/TAS)
P45973 (/TAS)
P45973 (/TAS)
P45973 (/TAS)
P45973 (/TAS)
P45973 (/TAS)
P45973 (/TAS)
P45973 (/TAS)
P45973 (/TAS)
(19 more) |
Negative regulation of transcription, DNA-templated GO:0045892
Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.
|
3 | P23198 (/ISO) Q61686 (/ISO) Q61686 (/ISO) |
Negative regulation of transcription by RNA polymerase II GO:0000122
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II.
|
2 | Q61686 (/ISO) Q61686 (/ISO) |
Negative regulation of transcription by RNA polymerase II GO:0000122
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II.
|
2 | Q61686 (/ISS) Q61686 (/ISS) |
There are 55 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
235 |
P23198 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
(225 more) |
Condensed chromosome, centromeric region GO:0000779
The region of a condensed chromosome that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome.
|
188 |
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
(178 more) |
Nuclear envelope GO:0005635
The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space).
|
188 |
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
(178 more) |
Nuclear pericentric heterochromatin GO:0031618
Nuclear heterochromatin that is located adjacent to the CENP-A rich centromere 'central core' and characterized by the modified histone H3K9me3.
|
188 |
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
(178 more) |
Nuclear euchromatin GO:0005719
The dispersed less dense form of chromatin in the interphase nucleus. It exists in at least two forms, a some being in the form of transcriptionally active chromatin which is the least condensed, while the rest is inactive euchromatin which is more condensed than active chromatin but less condensed than heterochromatin.
|
141 |
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
(131 more) |
Nuclear heterochromatin GO:0005720
A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin.
|
141 |
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
(131 more) |
Spindle GO:0005819
The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart.
|
141 |
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
A6H7C4 (/ISS)
(131 more) |
Chromatin GO:0000785
The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome.
|
128 |
P23198 (/IDA)
P83916 (/IDA)
P83916 (/IDA)
P83916 (/IDA)
P83916 (/IDA)
P83916 (/IDA)
P83916 (/IDA)
P83916 (/IDA)
P83916 (/IDA)
P83916 (/IDA)
(118 more) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
119 |
P23198 (/TAS)
P45973 (/TAS)
P45973 (/TAS)
P45973 (/TAS)
P45973 (/TAS)
P45973 (/TAS)
P45973 (/TAS)
P45973 (/TAS)
P45973 (/TAS)
P45973 (/TAS)
(109 more) |
Nuclear chromosome, telomeric region GO:0000784
The terminal region of a linear nuclear chromosome that includes the telomeric DNA repeats and associated proteins.
|
116 |
P45973 (/HDA)
P45973 (/HDA)
P45973 (/HDA)
P45973 (/HDA)
P45973 (/HDA)
P45973 (/HDA)
P45973 (/HDA)
P45973 (/HDA)
P45973 (/HDA)
P45973 (/HDA)
(106 more) |
Site of DNA damage GO:0090734
A region of a chromosome at which DNA damage has occurred. DNA damage signaling and repair proteins accumulate at the lesion to respond to the damage and repair the DNA to form a continuous DNA helix.
|
116 |
P45973 (/IMP)
P45973 (/IMP)
P45973 (/IMP)
P45973 (/IMP)
P45973 (/IMP)
P45973 (/IMP)
P45973 (/IMP)
P45973 (/IMP)
P45973 (/IMP)
P45973 (/IMP)
(106 more) |
Chromatin GO:0000785
The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome.
|
94 |
Q5R6X7 (/ISS)
Q5R6X7 (/ISS)
Q5R6X7 (/ISS)
Q5R6X7 (/ISS)
Q5R6X7 (/ISS)
Q5R6X7 (/ISS)
Q5R6X7 (/ISS)
Q5R6X7 (/ISS)
Q5R6X7 (/ISS)
Q5R6X7 (/ISS)
(84 more) |
Site of DNA damage GO:0090734
A region of a chromosome at which DNA damage has occurred. DNA damage signaling and repair proteins accumulate at the lesion to respond to the damage and repair the DNA to form a continuous DNA helix.
|
90 |
P23198 (/ISS)
P83917 (/ISS)
P83917 (/ISS)
P83917 (/ISS)
P83917 (/ISS)
P83917 (/ISS)
P83917 (/ISS)
P83917 (/ISS)
P83917 (/ISS)
P83917 (/ISS)
(80 more) |
Chromosome, centromeric region GO:0000775
The region of a chromosome that includes the centromeric DNA and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome.
|
87 |
P83916 (/IDA)
P83916 (/IDA)
P83916 (/IDA)
P83916 (/IDA)
P83916 (/IDA)
P83916 (/IDA)
P83916 (/IDA)
P83916 (/IDA)
P83916 (/IDA)
P83916 (/IDA)
(77 more) |
Spindle GO:0005819
The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart.
|
87 |
P83916 (/IDA)
P83916 (/IDA)
P83916 (/IDA)
P83916 (/IDA)
P83916 (/IDA)
P83916 (/IDA)
P83916 (/IDA)
P83916 (/IDA)
P83916 (/IDA)
P83916 (/IDA)
(77 more) |
Nuclear heterochromatin GO:0005720
A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin.
|
69 |
P45973 (/TAS)
P45973 (/TAS)
P45973 (/TAS)
P45973 (/TAS)
P45973 (/TAS)
P45973 (/TAS)
P45973 (/TAS)
P45973 (/TAS)
P45973 (/TAS)
P45973 (/TAS)
(59 more) |
Nuclear heterochromatin GO:0005720
A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin.
|
50 |
P23198 (/IDA)
Q13185 (/IDA)
Q13185 (/IDA)
Q13185 (/IDA)
Q13185 (/IDA)
Q13185 (/IDA)
Q13185 (/IDA)
Q13185 (/IDA)
Q13185 (/IDA)
Q13185 (/IDA)
(40 more) |
Nuclear inner membrane GO:0005637
The inner, i.e. lumen-facing, lipid bilayer of the nuclear envelope.
|
47 |
Q13185 (/NAS)
Q13185 (/NAS)
Q13185 (/NAS)
Q13185 (/NAS)
Q13185 (/NAS)
Q13185 (/NAS)
Q13185 (/NAS)
Q13185 (/NAS)
Q13185 (/NAS)
Q13185 (/NAS)
(37 more) |
Nuclear euchromatin GO:0005719
The dispersed less dense form of chromatin in the interphase nucleus. It exists in at least two forms, a some being in the form of transcriptionally active chromatin which is the least condensed, while the rest is inactive euchromatin which is more condensed than active chromatin but less condensed than heterochromatin.
|
47 |
Q13185 (/IDA)
Q13185 (/IDA)
Q13185 (/IDA)
Q13185 (/IDA)
Q13185 (/IDA)
Q13185 (/IDA)
Q13185 (/IDA)
Q13185 (/IDA)
Q13185 (/IDA)
Q13185 (/IDA)
(37 more) |
Senescence-associated heterochromatin focus GO:0035985
A transcriptionally-silent heterochromatin structure present in senescent cells. Contains the condensed chromatin of one chromosome and is enriched for histone modifications. Thought to repress expression of proliferation-promoting genes.
|
47 |
Q5RJK5 (/IDA)
Q5RJK5 (/IDA)
Q5RJK5 (/IDA)
Q5RJK5 (/IDA)
Q5RJK5 (/IDA)
Q5RJK5 (/IDA)
Q5RJK5 (/IDA)
Q5RJK5 (/IDA)
Q5RJK5 (/IDA)
Q5RJK5 (/IDA)
(37 more) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
43 |
P23198 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
(33 more) |
Chromocenter GO:0010369
A region in which centric, heterochromatic portions of one or more chromosomes form a compact structure.
|
43 |
P23198 (/IDA)
P83917 (/IDA)
P83917 (/IDA)
P83917 (/IDA)
P83917 (/IDA)
P83917 (/IDA)
P83917 (/IDA)
P83917 (/IDA)
P83917 (/IDA)
P83917 (/IDA)
(33 more) |
Site of DNA damage GO:0090734
A region of a chromosome at which DNA damage has occurred. DNA damage signaling and repair proteins accumulate at the lesion to respond to the damage and repair the DNA to form a continuous DNA helix.
|
43 |
P23198 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
(33 more) |
Pericentric heterochromatin GO:0005721
Heterochromatin that is located adjacent to the CENP-A rich centromere 'central core' and characterized by the modified histone H3K9me3.
|
42 |
P83917 (/IDA)
P83917 (/IDA)
P83917 (/IDA)
P83917 (/IDA)
P83917 (/IDA)
P83917 (/IDA)
P83917 (/IDA)
P83917 (/IDA)
P83917 (/IDA)
P83917 (/IDA)
(32 more) |
Chromosome, centromeric region GO:0000775
The region of a chromosome that includes the centromeric DNA and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome.
|
41 |
P23198 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
(31 more) |
Chromatin GO:0000785
The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome.
|
41 |
P23198 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
(31 more) |
Spindle GO:0005819
The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart.
|
41 |
P23198 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
P83917 (/ISO)
(31 more) |
Female pronucleus GO:0001939
The pronucleus originating from the ovum that is being fertilized.
|
40 |
P83917 (/IDA)
P83917 (/IDA)
P83917 (/IDA)
P83917 (/IDA)
P83917 (/IDA)
P83917 (/IDA)
P83917 (/IDA)
P83917 (/IDA)
P83917 (/IDA)
P83917 (/IDA)
(30 more) |
Male pronucleus GO:0001940
The pronucleus originating from the spermatozoa that was involved in fertilization.
|
40 |
P83917 (/IDA)
P83917 (/IDA)
P83917 (/IDA)
P83917 (/IDA)
P83917 (/IDA)
P83917 (/IDA)
P83917 (/IDA)
P83917 (/IDA)
P83917 (/IDA)
P83917 (/IDA)
(30 more) |
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
|
31 |
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
(21 more) |
Histone deacetylase complex GO:0000118
A protein complex that possesses histone deacetylase activity.
|
29 |
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
(19 more) |
Nuclear envelope GO:0005635
The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space).
|
29 |
P45973 (/TAS)
P45973 (/TAS)
P45973 (/TAS)
P45973 (/TAS)
P45973 (/TAS)
P45973 (/TAS)
P45973 (/TAS)
P45973 (/TAS)
P45973 (/TAS)
P45973 (/TAS)
(19 more) |
Pericentric heterochromatin GO:0005721
Heterochromatin that is located adjacent to the CENP-A rich centromere 'central core' and characterized by the modified histone H3K9me3.
|
29 |
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
(19 more) |
Transcriptional repressor complex GO:0017053
A protein complex that possesses activity that prevents or downregulates transcription.
|
29 |
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
(19 more) |
Nuclear pericentric heterochromatin GO:0031618
Nuclear heterochromatin that is located adjacent to the CENP-A rich centromere 'central core' and characterized by the modified histone H3K9me3.
|
29 |
P45973 (/NAS)
P45973 (/NAS)
P45973 (/NAS)
P45973 (/NAS)
P45973 (/NAS)
P45973 (/NAS)
P45973 (/NAS)
P45973 (/NAS)
P45973 (/NAS)
P45973 (/NAS)
(19 more) |
Protein-containing complex GO:0032991
A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together.
|
29 |
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
(19 more) |
Histone methyltransferase complex GO:0035097
A multimeric complex that is able to catalyze the addition of methyl groups to histone proteins.
|
29 |
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
P45973 (/ISS)
(19 more) |
Ribonucleoprotein complex GO:1990904
A macromolecular complex containing both protein and RNA molecules.
|
29 |
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
P45973 (/IDA)
(19 more) |
Histone deacetylase complex GO:0000118
A protein complex that possesses histone deacetylase activity.
|
2 | Q61686 (/IDA) Q61686 (/IDA) |
Kinetochore GO:0000776
A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules.
|
2 | Q61686 (/IDA) Q61686 (/IDA) |
Nuclear chromosome, telomeric region GO:0000784
The terminal region of a linear nuclear chromosome that includes the telomeric DNA repeats and associated proteins.
|
2 | Q61686 (/IDA) Q61686 (/IDA) |
Heterochromatin GO:0000792
A compact and highly condensed form of chromatin.
|
2 | Q61686 (/IDA) Q61686 (/IDA) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
2 | Q61686 (/ISS) Q61686 (/ISS) |
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
|
2 | Q61686 (/ISO) Q61686 (/ISO) |
Transcriptional repressor complex GO:0017053
A protein complex that possesses activity that prevents or downregulates transcription.
|
2 | Q61686 (/IDA) Q61686 (/IDA) |
Protein-containing complex GO:0032991
A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together.
|
2 | Q61686 (/ISO) Q61686 (/ISO) |
Histone methyltransferase complex GO:0035097
A multimeric complex that is able to catalyze the addition of methyl groups to histone proteins.
|
2 | Q61686 (/IDA) Q61686 (/IDA) |
Ribonucleoprotein complex GO:1990904
A macromolecular complex containing both protein and RNA molecules.
|
2 | Q61686 (/ISO) Q61686 (/ISO) |
Ribonucleoprotein complex GO:1990904
A macromolecular complex containing both protein and RNA molecules.
|
2 | Q61686 (/ISS) Q61686 (/ISS) |
Condensed chromosome, centromeric region GO:0000779
The region of a condensed chromosome that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome.
|
1 | P23198 (/IDA) |
Nuclear envelope GO:0005635
The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space).
|
1 | P23198 (/IDA) |
Nuclear euchromatin GO:0005719
The dispersed less dense form of chromatin in the interphase nucleus. It exists in at least two forms, a some being in the form of transcriptionally active chromatin which is the least condensed, while the rest is inactive euchromatin which is more condensed than active chromatin but less condensed than heterochromatin.
|
1 | P23198 (/ISO) |
Nuclear heterochromatin GO:0005720
A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin.
|
1 | P23198 (/ISO) |
Nuclear pericentric heterochromatin GO:0031618
Nuclear heterochromatin that is located adjacent to the CENP-A rich centromere 'central core' and characterized by the modified histone H3K9me3.
|
1 | P23198 (/IDA) |
Senescence-associated heterochromatin focus GO:0035985
A transcriptionally-silent heterochromatin structure present in senescent cells. Contains the condensed chromatin of one chromosome and is enriched for histone modifications. Thought to repress expression of proliferation-promoting genes.
|
1 | P23198 (/ISO) |