The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"Nucleic acid-binding proteins
".
FunFam 83: Holliday junction ATP-dependent DNA helicase RuvA
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 4 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Four-way junction helicase activity GO:0009378
Catalysis of the reaction: ATP + H2O = ADP + phosphate, where this reaction drives the unwinding of the DNA helix of DNA containing four-way junctions, including Holliday junctions.
|
157 |
P0A809 (/IDA)
P0A809 (/IDA)
P0A809 (/IDA)
P0A809 (/IDA)
P0A809 (/IDA)
P0A809 (/IDA)
P0A809 (/IDA)
P0A809 (/IDA)
P0A809 (/IDA)
P0A809 (/IDA)
(147 more) |
Four-way junction DNA binding GO:0000400
Interacting selectively and non-covalently with DNA containing four-way junctions, also known as Holliday junctions, a structure where two DNA double strands are held together by reciprocal exchange of two of the four strands, one strand each from the two original helices.
|
145 |
P0A809 (/IDA)
P0A809 (/IDA)
P0A809 (/IDA)
P0A809 (/IDA)
P0A809 (/IDA)
P0A809 (/IDA)
P0A809 (/IDA)
P0A809 (/IDA)
P0A809 (/IDA)
P0A809 (/IDA)
(135 more) |
Identical protein binding GO:0042802
Interacting selectively and non-covalently with an identical protein or proteins.
|
145 |
P0A809 (/IPI)
P0A809 (/IPI)
P0A809 (/IPI)
P0A809 (/IPI)
P0A809 (/IPI)
P0A809 (/IPI)
P0A809 (/IPI)
P0A809 (/IPI)
P0A809 (/IPI)
P0A809 (/IPI)
(135 more) |
Four-way junction helicase activity GO:0009378
Catalysis of the reaction: ATP + H2O = ADP + phosphate, where this reaction drives the unwinding of the DNA helix of DNA containing four-way junctions, including Holliday junctions.
|
7 | Q9KR01 (/ISS) Q9KR01 (/ISS) Q9KR01 (/ISS) Q9KR01 (/ISS) Q9KR01 (/ISS) Q9KR01 (/ISS) Q9KR01 (/ISS) |
There are 9 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
SOS response GO:0009432
An error-prone process for repairing damaged microbial DNA.
|
146 |
P0A809 (/IEP)
P0A809 (/IEP)
P0A809 (/IEP)
P0A809 (/IEP)
P0A809 (/IEP)
P0A809 (/IEP)
P0A809 (/IEP)
P0A809 (/IEP)
P0A809 (/IEP)
P0A809 (/IEP)
(136 more) |
Recombinational repair GO:0000725
A DNA repair process that involves the exchange, reciprocal or nonreciprocal, of genetic material between the broken DNA molecule and a homologous region of DNA.
|
145 |
P0A809 (/IMP)
P0A809 (/IMP)
P0A809 (/IMP)
P0A809 (/IMP)
P0A809 (/IMP)
P0A809 (/IMP)
P0A809 (/IMP)
P0A809 (/IMP)
P0A809 (/IMP)
P0A809 (/IMP)
(135 more) |
Response to radiation GO:0009314
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation.
|
145 |
P0A809 (/IMP)
P0A809 (/IMP)
P0A809 (/IMP)
P0A809 (/IMP)
P0A809 (/IMP)
P0A809 (/IMP)
P0A809 (/IMP)
P0A809 (/IMP)
P0A809 (/IMP)
P0A809 (/IMP)
(135 more) |
SOS response GO:0009432
An error-prone process for repairing damaged microbial DNA.
|
145 |
P0A809 (/RCA)
P0A809 (/RCA)
P0A809 (/RCA)
P0A809 (/RCA)
P0A809 (/RCA)
P0A809 (/RCA)
P0A809 (/RCA)
P0A809 (/RCA)
P0A809 (/RCA)
P0A809 (/RCA)
(135 more) |
Protein homotetramerization GO:0051289
The formation of a protein homotetramer, a macromolecular structure consisting of four noncovalently associated identical subunits.
|
145 |
P0A809 (/IDA)
P0A809 (/IDA)
P0A809 (/IDA)
P0A809 (/IDA)
P0A809 (/IDA)
P0A809 (/IDA)
P0A809 (/IDA)
P0A809 (/IDA)
P0A809 (/IDA)
P0A809 (/IDA)
(135 more) |
Double-strand break repair via homologous recombination GO:0000724
The error-free repair of a double-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule.
|
12 |
P9WGW3 (/IDA)
P9WGW3 (/IDA)
P9WGW3 (/IDA)
P9WGW3 (/IDA)
P9WGW3 (/IDA)
P9WGW3 (/IDA)
P9WGW3 (/IDA)
P9WGW3 (/IDA)
P9WGW3 (/IDA)
P9WGW3 (/IDA)
(2 more) |
Cellular response to DNA damage stimulus GO:0006974
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism.
|
12 |
P9WGW3 (/IEP)
P9WGW3 (/IEP)
P9WGW3 (/IEP)
P9WGW3 (/IEP)
P9WGW3 (/IEP)
P9WGW3 (/IEP)
P9WGW3 (/IEP)
P9WGW3 (/IEP)
P9WGW3 (/IEP)
P9WGW3 (/IEP)
(2 more) |
DNA recombination GO:0006310
Any process in which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Interchromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction.
|
7 | Q9KR01 (/ISS) Q9KR01 (/ISS) Q9KR01 (/ISS) Q9KR01 (/ISS) Q9KR01 (/ISS) Q9KR01 (/ISS) Q9KR01 (/ISS) |
SOS response GO:0009432
An error-prone process for repairing damaged microbial DNA.
|
4 | Q9AE10 (/EXP) Q9AE10 (/EXP) Q9AE10 (/EXP) Q9AE10 (/EXP) |
There are 3 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Holliday junction helicase complex GO:0009379
A DNA helicase complex found at Holliday junctions where the helicase activity is involved in the migration of the junction branch point. The best-characterized example is the E. coli RuvAB complex, in which a hexamer of RuvB subunits possesses helicase activity that is modulated by association with RuvA.
|
145 |
P0A809 (/IDA)
P0A809 (/IDA)
P0A809 (/IDA)
P0A809 (/IDA)
P0A809 (/IDA)
P0A809 (/IDA)
P0A809 (/IDA)
P0A809 (/IDA)
P0A809 (/IDA)
P0A809 (/IDA)
(135 more) |
Holliday junction resolvase complex GO:0048476
An endodeoxyribonuclease complex that resolves the 4-way DNA intermediates of a Holliday junction into two separate duplex DNA molecules. Can be branch-migration associated.
|
145 |
P0A809 (/IDA)
P0A809 (/IDA)
P0A809 (/IDA)
P0A809 (/IDA)
P0A809 (/IDA)
P0A809 (/IDA)
P0A809 (/IDA)
P0A809 (/IDA)
P0A809 (/IDA)
P0A809 (/IDA)
(135 more) |
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
|
12 |
P9WGW3 (/HDA)
P9WGW3 (/HDA)
P9WGW3 (/HDA)
P9WGW3 (/HDA)
P9WGW3 (/HDA)
P9WGW3 (/HDA)
P9WGW3 (/HDA)
P9WGW3 (/HDA)
P9WGW3 (/HDA)
P9WGW3 (/HDA)
(2 more) |