The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"Nucleic acid-binding proteins
".
FunFam 65: Single-stranded DNA-binding protein
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 5 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Single-stranded DNA binding GO:0003697
Interacting selectively and non-covalently with single-stranded DNA.
|
170 |
P0AGE0 (/IDA)
P0AGE0 (/IDA)
P0AGE0 (/IDA)
P0AGE0 (/IDA)
P0AGE0 (/IDA)
P0AGE0 (/IDA)
P0AGE0 (/IDA)
P0AGE0 (/IDA)
P0AGE0 (/IDA)
P0AGE0 (/IDA)
(160 more) |
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
170 |
P0AGE0 (/IPI)
P0AGE0 (/IPI)
P0AGE0 (/IPI)
P0AGE0 (/IPI)
P0AGE0 (/IPI)
P0AGE0 (/IPI)
P0AGE0 (/IPI)
P0AGE0 (/IPI)
P0AGE0 (/IPI)
P0AGE0 (/IPI)
(160 more) |
Enzyme activator activity GO:0008047
Binds to and increases the activity of an enzyme.
|
170 |
P0AGE0 (/IMP)
P0AGE0 (/IMP)
P0AGE0 (/IMP)
P0AGE0 (/IMP)
P0AGE0 (/IMP)
P0AGE0 (/IMP)
P0AGE0 (/IMP)
P0AGE0 (/IMP)
P0AGE0 (/IMP)
P0AGE0 (/IMP)
(160 more) |
Identical protein binding GO:0042802
Interacting selectively and non-covalently with an identical protein or proteins.
|
170 |
P0AGE0 (/IDA)
P0AGE0 (/IDA)
P0AGE0 (/IDA)
P0AGE0 (/IDA)
P0AGE0 (/IDA)
P0AGE0 (/IDA)
P0AGE0 (/IDA)
P0AGE0 (/IDA)
P0AGE0 (/IDA)
P0AGE0 (/IDA)
(160 more) |
Single-stranded DNA binding GO:0003697
Interacting selectively and non-covalently with single-stranded DNA.
|
6 | Q9KUW2 (/ISS) Q9KUW2 (/ISS) Q9KUW2 (/ISS) Q9KUW2 (/ISS) Q9KUW2 (/ISS) Q9KUW2 (/ISS) |
There are 7 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Recombinational repair GO:0000725
A DNA repair process that involves the exchange, reciprocal or nonreciprocal, of genetic material between the broken DNA molecule and a homologous region of DNA.
|
170 |
P0AGE0 (/TAS)
P0AGE0 (/TAS)
P0AGE0 (/TAS)
P0AGE0 (/TAS)
P0AGE0 (/TAS)
P0AGE0 (/TAS)
P0AGE0 (/TAS)
P0AGE0 (/TAS)
P0AGE0 (/TAS)
P0AGE0 (/TAS)
(160 more) |
Mismatch repair GO:0006298
A system for the correction of errors in which an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination.
|
170 |
P0AGE0 (/TAS)
P0AGE0 (/TAS)
P0AGE0 (/TAS)
P0AGE0 (/TAS)
P0AGE0 (/TAS)
P0AGE0 (/TAS)
P0AGE0 (/TAS)
P0AGE0 (/TAS)
P0AGE0 (/TAS)
P0AGE0 (/TAS)
(160 more) |
SOS response GO:0009432
An error-prone process for repairing damaged microbial DNA.
|
170 |
P0AGE0 (/TAS)
P0AGE0 (/TAS)
P0AGE0 (/TAS)
P0AGE0 (/TAS)
P0AGE0 (/TAS)
P0AGE0 (/TAS)
P0AGE0 (/TAS)
P0AGE0 (/TAS)
P0AGE0 (/TAS)
P0AGE0 (/TAS)
(160 more) |
Positive regulation of catalytic activity GO:0043085
Any process that activates or increases the activity of an enzyme.
|
170 |
P0AGE0 (/IMP)
P0AGE0 (/IMP)
P0AGE0 (/IMP)
P0AGE0 (/IMP)
P0AGE0 (/IMP)
P0AGE0 (/IMP)
P0AGE0 (/IMP)
P0AGE0 (/IMP)
P0AGE0 (/IMP)
P0AGE0 (/IMP)
(160 more) |
DNA replication GO:0006260
The cellular metabolic process in which a cell duplicates one or more molecules of DNA. DNA replication begins when specific sequences, known as origins of replication, are recognized and bound by initiation proteins, and ends when the original DNA molecule has been completely duplicated and the copies topologically separated. The unit of replication usually corresponds to the genome of the cell, an organelle, or a virus. The template for replication can either be an existing DNA molecule or RNA.
|
6 | Q9KUW2 (/ISS) Q9KUW2 (/ISS) Q9KUW2 (/ISS) Q9KUW2 (/ISS) Q9KUW2 (/ISS) Q9KUW2 (/ISS) |
DNA repair GO:0006281
The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway.
|
6 | Q9KUW2 (/ISS) Q9KUW2 (/ISS) Q9KUW2 (/ISS) Q9KUW2 (/ISS) Q9KUW2 (/ISS) Q9KUW2 (/ISS) |
DNA recombination GO:0006310
Any process in which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Interchromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction.
|
6 | Q9KUW2 (/ISS) Q9KUW2 (/ISS) Q9KUW2 (/ISS) Q9KUW2 (/ISS) Q9KUW2 (/ISS) Q9KUW2 (/ISS) |
There are 1 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
170 |
P0AGE0 (/IDA)
P0AGE0 (/IDA)
P0AGE0 (/IDA)
P0AGE0 (/IDA)
P0AGE0 (/IDA)
P0AGE0 (/IDA)
P0AGE0 (/IDA)
P0AGE0 (/IDA)
P0AGE0 (/IDA)
P0AGE0 (/IDA)
(160 more) |