The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"Nucleic acid-binding proteins
".
FunFam 11: 30S ribosomal protein S1
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 4 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Structural constituent of ribosome GO:0003735
The action of a molecule that contributes to the structural integrity of the ribosome.
|
362 |
C3TGB2 (/IDA)
C3TGB2 (/IDA)
C3TGB2 (/IDA)
C3TGB2 (/IDA)
C3TGB2 (/IDA)
C3TGB2 (/IDA)
C3TGB2 (/IDA)
C3TGB2 (/IDA)
C3TGB2 (/IDA)
C3TGB2 (/IDA)
(352 more) |
|
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
|
181 |
P0AG67 (/IDA)
P0AG67 (/IDA)
P0AG67 (/IDA)
P0AG67 (/IDA)
P0AG67 (/IDA)
P0AG67 (/IDA)
P0AG67 (/IDA)
P0AG67 (/IDA)
P0AG67 (/IDA)
P0AG67 (/IDA)
(171 more) |
|
MRNA binding GO:0003729
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
|
181 |
P0AG67 (/IDA)
P0AG67 (/IDA)
P0AG67 (/IDA)
P0AG67 (/IDA)
P0AG67 (/IDA)
P0AG67 (/IDA)
P0AG67 (/IDA)
P0AG67 (/IDA)
P0AG67 (/IDA)
P0AG67 (/IDA)
(171 more) |
|
Structural constituent of ribosome GO:0003735
The action of a molecule that contributes to the structural integrity of the ribosome.
|
7 | Q9KQT3 (/ISS) Q9KQT3 (/ISS) Q9KQT3 (/ISS) Q9KQT3 (/ISS) Q9KQT3 (/ISS) Q9KQT3 (/ISS) Q9KQT3 (/ISS) |
There are 5 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Ribosomal small subunit assembly GO:0000028
The aggregation, arrangement and bonding together of constituent RNAs and proteins to form the small ribosomal subunit.
|
362 |
C3TGB2 (/IDA)
C3TGB2 (/IDA)
C3TGB2 (/IDA)
C3TGB2 (/IDA)
C3TGB2 (/IDA)
C3TGB2 (/IDA)
C3TGB2 (/IDA)
C3TGB2 (/IDA)
C3TGB2 (/IDA)
C3TGB2 (/IDA)
(352 more) |
|
Translation GO:0006412
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
|
181 |
P0AG67 (/IMP)
P0AG67 (/IMP)
P0AG67 (/IMP)
P0AG67 (/IMP)
P0AG67 (/IMP)
P0AG67 (/IMP)
P0AG67 (/IMP)
P0AG67 (/IMP)
P0AG67 (/IMP)
P0AG67 (/IMP)
(171 more) |
|
Negative regulation of cytoplasmic translation GO:2000766
Any process that stops, prevents or reduces the frequency, rate or extent of cytoplasmic translation.
|
181 |
P0AG67 (/IDA)
P0AG67 (/IDA)
P0AG67 (/IDA)
P0AG67 (/IDA)
P0AG67 (/IDA)
P0AG67 (/IDA)
P0AG67 (/IDA)
P0AG67 (/IDA)
P0AG67 (/IDA)
P0AG67 (/IDA)
(171 more) |
|
Negative regulation of cytoplasmic translation GO:2000766
Any process that stops, prevents or reduces the frequency, rate or extent of cytoplasmic translation.
|
181 |
P0AG67 (/IEP)
P0AG67 (/IEP)
P0AG67 (/IEP)
P0AG67 (/IEP)
P0AG67 (/IEP)
P0AG67 (/IEP)
P0AG67 (/IEP)
P0AG67 (/IEP)
P0AG67 (/IEP)
P0AG67 (/IEP)
(171 more) |
|
Translation GO:0006412
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
|
7 | Q9KQT3 (/ISS) Q9KQT3 (/ISS) Q9KQT3 (/ISS) Q9KQT3 (/ISS) Q9KQT3 (/ISS) Q9KQT3 (/ISS) Q9KQT3 (/ISS) |
There are 5 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
| GO Term | Annotations | Evidence |
|---|---|---|
|
Cytosolic small ribosomal subunit GO:0022627
The small subunit of a ribosome located in the cytosol.
|
362 |
C3TGB2 (/IDA)
C3TGB2 (/IDA)
C3TGB2 (/IDA)
C3TGB2 (/IDA)
C3TGB2 (/IDA)
C3TGB2 (/IDA)
C3TGB2 (/IDA)
C3TGB2 (/IDA)
C3TGB2 (/IDA)
C3TGB2 (/IDA)
(352 more) |
|
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
181 |
P0AG67 (/HDA)
P0AG67 (/HDA)
P0AG67 (/HDA)
P0AG67 (/HDA)
P0AG67 (/HDA)
P0AG67 (/HDA)
P0AG67 (/HDA)
P0AG67 (/HDA)
P0AG67 (/HDA)
P0AG67 (/HDA)
(171 more) |
|
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
|
181 |
P0AG67 (/HDA)
P0AG67 (/HDA)
P0AG67 (/HDA)
P0AG67 (/HDA)
P0AG67 (/HDA)
P0AG67 (/HDA)
P0AG67 (/HDA)
P0AG67 (/HDA)
P0AG67 (/HDA)
P0AG67 (/HDA)
(171 more) |
|
Cytosolic small ribosomal subunit GO:0022627
The small subunit of a ribosome located in the cytosol.
|
7 | Q9KQT3 (/ISS) Q9KQT3 (/ISS) Q9KQT3 (/ISS) Q9KQT3 (/ISS) Q9KQT3 (/ISS) Q9KQT3 (/ISS) Q9KQT3 (/ISS) |
|
Symbiont-containing vacuole GO:0020003
Membrane-bounded vacuole within a host cell in which a symbiont organism resides. The vacuole membrane is derived from both the host and symbiont.
|
4 | Q9Z8M3 (/IDA) Q9Z8M3 (/IDA) Q9Z8M3 (/IDA) Q9Z8M3 (/IDA) |
