The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"Translation factors
".
FunFam 1: Elongation factor Tu
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 15 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
237 |
P0CE47 (/IPI)
P0CE47 (/IPI)
P0CE47 (/IPI)
P0CE47 (/IPI)
P0CE47 (/IPI)
P0CE47 (/IPI)
P0CE47 (/IPI)
P0CE47 (/IPI)
P0CE47 (/IPI)
P0CE47 (/IPI)
(227 more) |
Zymogen binding GO:0035375
Interacting selectively and non-covalently with a zymogen, an enzymatically inactive precursor of an enzyme that is often convertible to an active enzyme by proteolysis.
|
14 |
P9WNN1 (/IPI)
P9WNN1 (/IPI)
P9WNN1 (/IPI)
P9WNN1 (/IPI)
P9WNN1 (/IPI)
P9WNN1 (/IPI)
P9WNN1 (/IPI)
P9WNN1 (/IPI)
P9WNN1 (/IPI)
P9WNN1 (/IPI)
(4 more) |
Translation elongation factor activity GO:0003746
Functions in chain elongation during polypeptide synthesis at the ribosome.
|
11 |
A1Z9E3 (/ISS)
P84172 (/ISS)
Q54HB2 (/ISS)
Q8IE20 (/ISS)
Q8IE20 (/ISS)
Q9KUZ6 (/ISS)
Q9KUZ6 (/ISS)
Q9KUZ6 (/ISS)
Q9KUZ6 (/ISS)
Q9KV37 (/ISS)
(1 more) |
Fibronectin binding GO:0001968
Interacting selectively and non-covalently with a fibronectin, a group of related adhesive glycoproteins of high molecular weight found on the surface of animal cells, connective tissue matrices, and in extracellular fluids.
|
3 | P23568 (/IPI) P23568 (/IPI) P23568 (/IPI) |
Translation elongation factor activity GO:0003746
Functions in chain elongation during polypeptide synthesis at the ribosome.
|
3 | P02992 (/IDA) P02992 (/IDA) P02992 (/IDA) |
GTPase activity GO:0003924
Catalysis of the reaction: GTP + H2O = GDP + phosphate.
|
3 | P02992 (/IDA) P02992 (/IDA) P02992 (/IDA) |
GTP binding GO:0005525
Interacting selectively and non-covalently with GTP, guanosine triphosphate.
|
3 | Q8IE20 (/ISS) Q8IE20 (/ISS) Q9Y700 (/ISS) |
Translation elongation factor activity GO:0003746
Functions in chain elongation during polypeptide synthesis at the ribosome.
|
2 | O24310 (/TAS) Q9FUZ6 (/TAS) |
ATP binding GO:0005524
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
|
2 | Q9ZT91 (/IDA) Q9ZT91 (/IDA) |
Zinc ion binding GO:0008270
Interacting selectively and non-covalently with zinc (Zn) ions.
|
2 | Q9ZT91 (/IDA) Q9ZT91 (/IDA) |
Cobalt ion binding GO:0050897
Interacting selectively and non-covalently with a cobalt (Co) ion.
|
2 | Q9ZT91 (/IDA) Q9ZT91 (/IDA) |
TRNA binding GO:0000049
Interacting selectively and non-covalently with transfer RNA.
|
1 | Q9Y700 (/ISS) |
GTPase activity GO:0003924
Catalysis of the reaction: GTP + H2O = GDP + phosphate.
|
1 | Q9Y700 (/ISO) |
GTPase activity GO:0003924
Catalysis of the reaction: GTP + H2O = GDP + phosphate.
|
1 | A1Z9E3 (/ISS) |
GTP binding GO:0005525
Interacting selectively and non-covalently with GTP, guanosine triphosphate.
|
1 | Q9FUZ6 (/RCA) |
There are 16 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Response to hypoxia GO:0001666
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level.
|
14 |
P9WNN1 (/IEP)
P9WNN1 (/IEP)
P9WNN1 (/IEP)
P9WNN1 (/IEP)
P9WNN1 (/IEP)
P9WNN1 (/IEP)
P9WNN1 (/IEP)
P9WNN1 (/IEP)
P9WNN1 (/IEP)
P9WNN1 (/IEP)
(4 more) |
Response to iron ion GO:0010039
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an iron ion stimulus.
|
14 |
P9WNN1 (/IEP)
P9WNN1 (/IEP)
P9WNN1 (/IEP)
P9WNN1 (/IEP)
P9WNN1 (/IEP)
P9WNN1 (/IEP)
P9WNN1 (/IEP)
P9WNN1 (/IEP)
P9WNN1 (/IEP)
P9WNN1 (/IEP)
(4 more) |
Translational elongation GO:0006414
The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis.
|
10 | A1Z9E3 (/ISS) P84172 (/ISS) Q54HB2 (/ISS) Q8IE20 (/ISS) Q8IE20 (/ISS) Q9KUZ6 (/ISS) Q9KUZ6 (/ISS) Q9KUZ6 (/ISS) Q9KUZ6 (/ISS) Q9KV37 (/ISS) |
Modulation by symbiont of host cellular process GO:0044068
Any process in which a symbiont organism modulates the frequency, rate or extent of a cellular process, any process that is carried out at the cellular level, but not necessarily restricted to a single cell, in its host organism.
|
6 | Q74JU6 (/IDA) Q74JU6 (/IDA) Q74JU6 (/IDA) Q74JU6 (/IDA) Q74JU6 (/IDA) Q74JU6 (/IDA) |
Adhesion of symbiont to host epithelial cell GO:0044651
The attachment of a symbiont to a host epithelial cell via adhesion molecules, general stickiness etc., either directly or indirectly.
|
6 | Q74JU6 (/IDA) Q74JU6 (/IDA) Q74JU6 (/IDA) Q74JU6 (/IDA) Q74JU6 (/IDA) Q74JU6 (/IDA) |
Positive regulation of interleukin-8 secretion GO:2000484
Any process that activates or increases the frequency, rate or extent of interleukin-8 secretion.
|
6 | Q74JU6 (/IMP) Q74JU6 (/IMP) Q74JU6 (/IMP) Q74JU6 (/IMP) Q74JU6 (/IMP) Q74JU6 (/IMP) |
Mitochondrial translation GO:0032543
The chemical reactions and pathways resulting in the formation of a protein in a mitochondrion. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein; the mitochondrion has its own ribosomes and transfer RNAs, and uses a genetic code that differs from the nuclear code.
|
3 | P02992 (/IDA) P02992 (/IDA) P02992 (/IDA) |
Mitochondrial translation GO:0032543
The chemical reactions and pathways resulting in the formation of a protein in a mitochondrion. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein; the mitochondrion has its own ribosomes and transfer RNAs, and uses a genetic code that differs from the nuclear code.
|
3 | P02992 (/IGI) P02992 (/IGI) P02992 (/IGI) |
Interaction with host via substance in symbiont cell outer membrane GO:0044045
An interaction with the host organism mediated by a substance in the symbiont cell outer membrane - a lipid bilayer that forms the outermost layer of the symbiont cell envelope. The host is defined as the larger of the organisms involved in a symbiotic interaction.
|
3 | P23568 (/IMP) P23568 (/IMP) P23568 (/IMP) |
Mitochondrial translational elongation GO:0070125
The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis in a mitochondrion.
|
3 | P02992 (/IMP) P02992 (/IMP) P02992 (/IMP) |
Translational elongation GO:0006414
The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis.
|
2 | O24310 (/TAS) Q9FUZ6 (/TAS) |
Response to cadmium ion GO:0046686
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cadmium (Cd) ion stimulus.
|
2 | Q9ZT91 (/IEP) Q9ZT91 (/IEP) |
Mitotic cell cycle GO:0000278
Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent.
|
1 | A1Z9E3 (/IMP) |
Golgi organization GO:0007030
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the Golgi apparatus.
|
1 | A1Z9E3 (/IMP) |
Cell population proliferation GO:0008283
The multiplication or reproduction of cells, resulting in the expansion of a cell population.
|
1 | A1Z9E3 (/IMP) |
Mitochondrial translational elongation GO:0070125
The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis in a mitochondrion.
|
1 | Q9Y700 (/IGI) |
There are 29 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
107 |
P0CE48 (/IDA)
P0CE48 (/IDA)
P0CE48 (/IDA)
P0CE48 (/IDA)
P0CE48 (/IDA)
P0CE48 (/IDA)
P0CE48 (/IDA)
P0CE48 (/IDA)
P0CE48 (/IDA)
P0CE48 (/IDA)
(97 more) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
105 |
P0CE47 (/HDA)
P0CE47 (/HDA)
P0CE47 (/HDA)
P0CE47 (/HDA)
P0CE47 (/HDA)
P0CE47 (/HDA)
P0CE47 (/HDA)
P0CE47 (/HDA)
P0CE47 (/HDA)
P0CE47 (/HDA)
(95 more) |
Extracellular region GO:0005576
The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
|
14 |
P9WNN1 (/IDA)
P9WNN1 (/IDA)
P9WNN1 (/IDA)
P9WNN1 (/IDA)
P9WNN1 (/IDA)
P9WNN1 (/IDA)
P9WNN1 (/IDA)
P9WNN1 (/IDA)
P9WNN1 (/IDA)
P9WNN1 (/IDA)
(4 more) |
Cell wall GO:0005618
The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
|
14 |
P9WNN1 (/HDA)
P9WNN1 (/HDA)
P9WNN1 (/HDA)
P9WNN1 (/HDA)
P9WNN1 (/HDA)
P9WNN1 (/HDA)
P9WNN1 (/HDA)
P9WNN1 (/HDA)
P9WNN1 (/HDA)
P9WNN1 (/HDA)
(4 more) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
14 |
P9WNN1 (/HDA)
P9WNN1 (/HDA)
P9WNN1 (/HDA)
P9WNN1 (/HDA)
P9WNN1 (/HDA)
P9WNN1 (/HDA)
P9WNN1 (/HDA)
P9WNN1 (/HDA)
P9WNN1 (/HDA)
P9WNN1 (/HDA)
(4 more) |
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
|
14 |
P9WNN1 (/HDA)
P9WNN1 (/HDA)
P9WNN1 (/HDA)
P9WNN1 (/HDA)
P9WNN1 (/HDA)
P9WNN1 (/HDA)
P9WNN1 (/HDA)
P9WNN1 (/HDA)
P9WNN1 (/HDA)
P9WNN1 (/HDA)
(4 more) |
Gram-positive-bacterium-type cell wall GO:0009275
A layer of peptidoglycan found outside of the cytoplasmic membrane. The peptidoglycan is relatively thick (20-80nm) and retains the primary stain of the Gram procedure, thus cells appear blue after Gram stain. The cell walls often contain teichoic acids (acidic anionic polysaccharides) bound to the peptidoglycan. Examples of this component are found in Gram-positive bacteria.
|
12 |
C2E605 (/IDA)
C2E605 (/IDA)
C2E605 (/IDA)
C2E605 (/IDA)
C2E605 (/IDA)
C2E605 (/IDA)
Q74JU6 (/IDA)
Q74JU6 (/IDA)
Q74JU6 (/IDA)
Q74JU6 (/IDA)
(2 more) |
External side of cell wall GO:0010339
The side of the cell wall that is opposite to the side that faces the cell and its contents.
|
12 |
C2E605 (/IDA)
C2E605 (/IDA)
C2E605 (/IDA)
C2E605 (/IDA)
C2E605 (/IDA)
C2E605 (/IDA)
Q74JU6 (/IDA)
Q74JU6 (/IDA)
Q74JU6 (/IDA)
Q74JU6 (/IDA)
(2 more) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
6 | Q74JU6 (/IDA) Q74JU6 (/IDA) Q74JU6 (/IDA) Q74JU6 (/IDA) Q74JU6 (/IDA) Q74JU6 (/IDA) |
Plasma membrane GO:0005886
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
|
6 | Q74JU6 (/IDA) Q74JU6 (/IDA) Q74JU6 (/IDA) Q74JU6 (/IDA) Q74JU6 (/IDA) Q74JU6 (/IDA) |
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
|
5 | A1Z9E3 (/HDA) P02992 (/HDA) P02992 (/HDA) P02992 (/HDA) Q9Y700 (/HDA) |
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
|
5 | P02992 (/IDA) P02992 (/IDA) P02992 (/IDA) Q9ZT91 (/IDA) Q9ZT91 (/IDA) |
Membrane GO:0016020
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
|
5 | P17745 (/IDA) P17745 (/IDA) P23568 (/IDA) P23568 (/IDA) P23568 (/IDA) |
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
|
3 | A1Z9E3 (/ISS) P84172 (/ISS) Q54HB2 (/ISS) |
Chloroplast GO:0009507
A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
|
3 | O24310 (/IDA) P17745 (/IDA) P17745 (/IDA) |
External side of plasma membrane GO:0009897
The leaflet of the plasma membrane that faces away from the cytoplasm and any proteins embedded or anchored in it or attached to its surface.
|
3 | P23568 (/IDA) P23568 (/IDA) P23568 (/IDA) |
Cell wall GO:0005618
The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
|
2 | Q9ZT91 (/IDA) Q9ZT91 (/IDA) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
2 | P17745 (/IDA) P17745 (/IDA) |
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
|
2 | P17745 (/IDA) P17745 (/IDA) |
Chloroplast thylakoid GO:0009534
Sac-like membranous structures (cisternae) in a chloroplast combined into stacks (grana) and present singly in the stroma (stroma thylakoids or frets) as interconnections between grana. An example of this component is found in Arabidopsis thaliana.
|
2 | P17745 (/IDA) P17745 (/IDA) |
Chloroplast thylakoid membrane GO:0009535
The pigmented membrane of a chloroplast thylakoid. An example of this component is found in Arabidopsis thaliana.
|
2 | P17745 (/IDA) P17745 (/IDA) |
Plastid GO:0009536
Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.
|
2 | P17745 (/IDA) P17745 (/IDA) |
Chloroplast stroma GO:0009570
The space enclosed by the double membrane of a chloroplast but excluding the thylakoid space. It contains DNA, ribosomes and some temporary products of photosynthesis.
|
2 | P17745 (/IDA) P17745 (/IDA) |
Chloroplast envelope GO:0009941
The double lipid bilayer enclosing the chloroplast and separating its contents from the rest of the cytoplasm; includes the intermembrane space.
|
2 | P17745 (/IDA) P17745 (/IDA) |
Chloroplast nucleoid GO:0042644
The region of a chloroplast to which the DNA is confined.
|
2 | P17745 (/IDA) P17745 (/IDA) |
Apoplast GO:0048046
The cell membranes and intracellular regions in a plant are connected through plasmodesmata, and plants may be described as having two major compartments: the living symplast and the non-living apoplast. The apoplast is external to the plasma membrane and includes cell walls, intercellular spaces and the lumen of dead structures such as xylem vessels. Water and solutes pass freely through it.
|
2 | P17745 (/IDA) P17745 (/IDA) |
Mitochondrion GO:0005739
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
|
1 | Q9FUZ6 (/RCA) |
Mitochondrial matrix GO:0005759
The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty acid oxidation.
|
1 | Q9Y700 (/ISS) |
Phagocytic vesicle GO:0045335
A membrane-bounded intracellular vesicle that arises from the ingestion of particulate material by phagocytosis.
|
1 | Q54HB2 (/HDA) |