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CATH Superfamily 2.30.42.10

PDZ domain

The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
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FunFam 96: PDZ domain-containing protein 11

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 3 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Protein C-terminus binding GO:0008022
Interacting selectively and non-covalently with a protein C-terminus, the end of any peptide chain at which the 1-carboxyl function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue.
 58 Q28I41 (/ISS) Q32LE7 (/ISS) Q32LE7 (/ISS) Q32LE7 (/ISS) Q32LE7 (/ISS) Q32LE7 (/ISS) Q32LE7 (/ISS) Q32LE7 (/ISS) Q32LE7 (/ISS) Q32LE7 (/ISS)
(48 more)
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
 17 Q5EBL8 (/IPI) Q5EBL8 (/IPI) Q5EBL8 (/IPI) Q5EBL8 (/IPI) Q5EBL8 (/IPI) Q5EBL8 (/IPI) Q5EBL8 (/IPI) Q5EBL8 (/IPI) Q5EBL8 (/IPI) Q5EBL8 (/IPI)
(7 more)
Protein C-terminus binding GO:0008022
Interacting selectively and non-covalently with a protein C-terminus, the end of any peptide chain at which the 1-carboxyl function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue.
 3 Q9CZG9 (/ISO) Q9CZG9 (/ISO) Q9CZG9 (/ISO)

There are 6 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Pore complex assembly GO:0046931
The aggregation, arrangement and bonding together of a set of components to form a pore complex. A pore complex is a small opening in a membrane that allows the passage of liquids and/or gases.
 20 Q5EBL8 (/IMP) Q5EBL8 (/IMP) Q5EBL8 (/IMP) Q5EBL8 (/IMP) Q5EBL8 (/IMP) Q5EBL8 (/IMP) Q5EBL8 (/IMP) Q5EBL8 (/IMP) Q5EBL8 (/IMP) Q5EBL8 (/IMP)
(10 more)
Biotin metabolic process GO:0006768
The chemical reactions and pathways involving biotin, cis-tetrahydro-2-oxothieno(3,4-d)imidazoline-4-valeric acid; the (+) enantiomer is very widely distributed in cells and serves as a carrier in a number of enzymatic beta-carboxylation reactions.
 17 Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS)
(7 more)
Pantothenate metabolic process GO:0015939
The chemical reactions and pathways involving pantothenate, the anion of pantothenic acid, the amide of beta-alanine and pantoic acid. It is a B complex vitamin that is a constituent of coenzyme A and is distributed ubiquitously in foods.
 17 Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS)
(7 more)
Antimicrobial humoral response GO:0019730
An immune response against microbes mediated through a body fluid. Examples of this process are seen in the antimicrobial humoral response of Drosophila melanogaster and Mus musculus.
 17 Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS)
(7 more)
Ion transmembrane transport GO:0034220
A process in which an ion is transported across a membrane.
 17 Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS)
(7 more)
Transmembrane transport GO:0055085
The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other.
 17 Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS)
(7 more)

There are 6 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
 58 Q28I41 (/ISS) Q32LE7 (/ISS) Q32LE7 (/ISS) Q32LE7 (/ISS) Q32LE7 (/ISS) Q32LE7 (/ISS) Q32LE7 (/ISS) Q32LE7 (/ISS) Q32LE7 (/ISS) Q32LE7 (/ISS)
(48 more)
Basolateral plasma membrane GO:0016323
The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis.
 58 Q28I41 (/ISS) Q32LE7 (/ISS) Q32LE7 (/ISS) Q32LE7 (/ISS) Q32LE7 (/ISS) Q32LE7 (/ISS) Q32LE7 (/ISS) Q32LE7 (/ISS) Q32LE7 (/ISS) Q32LE7 (/ISS)
(48 more)
Pore complex GO:0046930
Any small opening in a membrane that allows the passage of gases and/or liquids.
 20 Q5EBL8 (/IMP) Q5EBL8 (/IMP) Q5EBL8 (/IMP) Q5EBL8 (/IMP) Q5EBL8 (/IMP) Q5EBL8 (/IMP) Q5EBL8 (/IMP) Q5EBL8 (/IMP) Q5EBL8 (/IMP) Q5EBL8 (/IMP)
(10 more)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
 17 Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS) Q5EBL8 (/TAS)
(7 more)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
 3 Q9CZG9 (/ISO) Q9CZG9 (/ISO) Q9CZG9 (/ISO)
Basolateral plasma membrane GO:0016323
The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis.
 3 Q9CZG9 (/ISO) Q9CZG9 (/ISO) Q9CZG9 (/ISO)
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