CATH Superfamily 2.30.30.140
The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.
FunFam 24: Mortality factor 4-like protein 1
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 4 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
8 | P60762 (/IPI) P60762 (/IPI) Q9UBU8 (/IPI) Q9UBU8 (/IPI) Q9UBU8 (/IPI) Q9UBU8 (/IPI) Q9UBU8 (/IPI) Q9UBU8 (/IPI) |
Protein N-terminus binding GO:0047485
Interacting selectively and non-covalently with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue.
|
6 | Q9UBU8 (/IPI) Q9UBU8 (/IPI) Q9UBU8 (/IPI) Q9UBU8 (/IPI) Q9UBU8 (/IPI) Q9UBU8 (/IPI) |
Chromatin binding GO:0003682
Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.
|
2 | P60762 (/IDA) P60762 (/IDA) |
Protein N-terminus binding GO:0047485
Interacting selectively and non-covalently with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue.
|
2 | P60762 (/ISO) P60762 (/ISO) |
There are 14 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Double-strand break repair via homologous recombination GO:0000724
The error-free repair of a double-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule.
|
6 | Q9UBU8 (/IDA) Q9UBU8 (/IDA) Q9UBU8 (/IDA) Q9UBU8 (/IDA) Q9UBU8 (/IDA) Q9UBU8 (/IDA) |
Histone deacetylation GO:0016575
The modification of histones by removal of acetyl groups.
|
6 | Q9UBU8 (/IDA) Q9UBU8 (/IDA) Q9UBU8 (/IDA) Q9UBU8 (/IDA) Q9UBU8 (/IDA) Q9UBU8 (/IDA) |
Histone H4 acetylation GO:0043967
The modification of histone H4 by the addition of an acetyl group.
|
6 | Q9UBU8 (/IDA) Q9UBU8 (/IDA) Q9UBU8 (/IDA) Q9UBU8 (/IDA) Q9UBU8 (/IDA) Q9UBU8 (/IDA) |
Histone H2A acetylation GO:0043968
The modification of histone H2A by the addition of an acetyl group.
|
6 | Q9UBU8 (/IDA) Q9UBU8 (/IDA) Q9UBU8 (/IDA) Q9UBU8 (/IDA) Q9UBU8 (/IDA) Q9UBU8 (/IDA) |
Double-strand break repair via homologous recombination GO:0000724
The error-free repair of a double-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule.
|
4 | P60762 (/ISS) P60762 (/ISS) Q5NVP9 (/ISS) Q6AYU1 (/ISS) |
Histone deacetylation GO:0016575
The modification of histones by removal of acetyl groups.
|
4 | P60762 (/ISS) P60762 (/ISS) Q5NVP9 (/ISS) Q6AYU1 (/ISS) |
Histone H4 acetylation GO:0043967
The modification of histone H4 by the addition of an acetyl group.
|
4 | P60762 (/ISS) P60762 (/ISS) Q5NVP9 (/ISS) Q6AYU1 (/ISS) |
Histone H2A acetylation GO:0043968
The modification of histone H2A by the addition of an acetyl group.
|
4 | P60762 (/ISS) P60762 (/ISS) Q5NVP9 (/ISS) Q6AYU1 (/ISS) |
Double-strand break repair via homologous recombination GO:0000724
The error-free repair of a double-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule.
|
2 | P60762 (/ISO) P60762 (/ISO) |
Chromatin remodeling GO:0006338
Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation.
|
2 | P60762 (/TAS) P60762 (/TAS) |
Cell population proliferation GO:0008283
The multiplication or reproduction of cells, resulting in the expansion of a cell population.
|
2 | P60762 (/IMP) P60762 (/IMP) |
Histone deacetylation GO:0016575
The modification of histones by removal of acetyl groups.
|
2 | P60762 (/ISO) P60762 (/ISO) |
Histone H4 acetylation GO:0043967
The modification of histone H4 by the addition of an acetyl group.
|
2 | P60762 (/ISO) P60762 (/ISO) |
Histone H2A acetylation GO:0043968
The modification of histone H2A by the addition of an acetyl group.
|
2 | P60762 (/ISO) P60762 (/ISO) |
There are 9 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Nuclear speck GO:0016607
A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy.
|
12 |
B3KTM8 (/IDA)
B3KTM8 (/IDA)
B3KTM8 (/IDA)
H0YMJ0 (/IDA)
H0YMJ0 (/IDA)
H0YNE0 (/IDA)
Q9UBU8 (/IDA)
Q9UBU8 (/IDA)
Q9UBU8 (/IDA)
Q9UBU8 (/IDA)
(2 more) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
6 | Q9UBU8 (/TAS) Q9UBU8 (/TAS) Q9UBU8 (/TAS) Q9UBU8 (/TAS) Q9UBU8 (/TAS) Q9UBU8 (/TAS) |
Sin3 complex GO:0016580
A multiprotein complex that functions broadly in eukaryotic organisms as a transcriptional repressor of protein-coding genes, through the gene-specific deacetylation of histones. Amongst its subunits, the Sin3 complex contains Sin3-like proteins, and a number of core proteins that are shared with the NuRD complex (including histone deacetylases and histone binding proteins). The Sin3 complex does not directly bind DNA itself, but is targeted to specific genes through protein-protein interactions with DNA-binding proteins.
|
6 | Q9UBU8 (/IDA) Q9UBU8 (/IDA) Q9UBU8 (/IDA) Q9UBU8 (/IDA) Q9UBU8 (/IDA) Q9UBU8 (/IDA) |
NuA4 histone acetyltransferase complex GO:0035267
A complex having histone acetylase activity on chromatin, as well as ATPase, DNA helicase and structural DNA binding activities. The complex is thought to be involved in double-strand DNA break repair. Subunits of the human complex include HTATIP/TIP60, TRRAP, RUVBL1, BUVBL2, beta-actin and BAF53/ACTL6A. In yeast, the complex has 13 subunits, including the catalytic subunit Esa1 (homologous to human Tip60).
|
6 | Q9UBU8 (/IDA) Q9UBU8 (/IDA) Q9UBU8 (/IDA) Q9UBU8 (/IDA) Q9UBU8 (/IDA) Q9UBU8 (/IDA) |
Sin3 complex GO:0016580
A multiprotein complex that functions broadly in eukaryotic organisms as a transcriptional repressor of protein-coding genes, through the gene-specific deacetylation of histones. Amongst its subunits, the Sin3 complex contains Sin3-like proteins, and a number of core proteins that are shared with the NuRD complex (including histone deacetylases and histone binding proteins). The Sin3 complex does not directly bind DNA itself, but is targeted to specific genes through protein-protein interactions with DNA-binding proteins.
|
4 | P60762 (/ISS) P60762 (/ISS) Q5NVP9 (/ISS) Q6AYU1 (/ISS) |
NuA4 histone acetyltransferase complex GO:0035267
A complex having histone acetylase activity on chromatin, as well as ATPase, DNA helicase and structural DNA binding activities. The complex is thought to be involved in double-strand DNA break repair. Subunits of the human complex include HTATIP/TIP60, TRRAP, RUVBL1, BUVBL2, beta-actin and BAF53/ACTL6A. In yeast, the complex has 13 subunits, including the catalytic subunit Esa1 (homologous to human Tip60).
|
4 | P60762 (/ISS) P60762 (/ISS) Q5NVP9 (/ISS) Q6AYU1 (/ISS) |
Sin3 complex GO:0016580
A multiprotein complex that functions broadly in eukaryotic organisms as a transcriptional repressor of protein-coding genes, through the gene-specific deacetylation of histones. Amongst its subunits, the Sin3 complex contains Sin3-like proteins, and a number of core proteins that are shared with the NuRD complex (including histone deacetylases and histone binding proteins). The Sin3 complex does not directly bind DNA itself, but is targeted to specific genes through protein-protein interactions with DNA-binding proteins.
|
2 | P60762 (/ISO) P60762 (/ISO) |
Nuclear speck GO:0016607
A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy.
|
2 | P60762 (/ISO) P60762 (/ISO) |
NuA4 histone acetyltransferase complex GO:0035267
A complex having histone acetylase activity on chromatin, as well as ATPase, DNA helicase and structural DNA binding activities. The complex is thought to be involved in double-strand DNA break repair. Subunits of the human complex include HTATIP/TIP60, TRRAP, RUVBL1, BUVBL2, beta-actin and BAF53/ACTL6A. In yeast, the complex has 13 subunits, including the catalytic subunit Esa1 (homologous to human Tip60).
|
2 | P60762 (/ISO) P60762 (/ISO) |