CATH Superfamily 2.20.28.10
The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.
FunFam 9: RING finger and CHY zinc finger domain-containing ...
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 18 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Ubiquitin-protein transferase activity GO:0004842
Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.
|
15 |
Q8VZK0 (/IDA)
Q8VZK0 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
(5 more) |
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
14 |
Q8LPQ5 (/IPI)
Q96PM5 (/IPI)
Q96PM5 (/IPI)
Q96PM5 (/IPI)
Q96PM5 (/IPI)
Q96PM5 (/IPI)
Q96PM5 (/IPI)
Q96PM5 (/IPI)
Q96PM5 (/IPI)
Q96PM5 (/IPI)
(4 more) |
Zinc ion binding GO:0008270
Interacting selectively and non-covalently with zinc (Zn) ions.
|
14 |
Q8LPQ5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
(4 more) |
P53 binding GO:0002039
Interacting selectively and non-covalently with one of the p53 family of proteins.
|
13 |
Q96PM5 (/IPI)
Q96PM5 (/IPI)
Q96PM5 (/IPI)
Q96PM5 (/IPI)
Q96PM5 (/IPI)
Q96PM5 (/IPI)
Q96PM5 (/IPI)
Q96PM5 (/IPI)
Q96PM5 (/IPI)
Q96PM5 (/IPI)
(3 more) |
Ubiquitin-protein transferase activity GO:0004842
Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.
|
13 |
Q96PM5 (/TAS)
Q96PM5 (/TAS)
Q96PM5 (/TAS)
Q96PM5 (/TAS)
Q96PM5 (/TAS)
Q96PM5 (/TAS)
Q96PM5 (/TAS)
Q96PM5 (/TAS)
Q96PM5 (/TAS)
Q96PM5 (/TAS)
(3 more) |
Protein homodimerization activity GO:0042803
Interacting selectively and non-covalently with an identical protein to form a homodimer.
|
13 |
Q96PM5 (/IPI)
Q96PM5 (/IPI)
Q96PM5 (/IPI)
Q96PM5 (/IPI)
Q96PM5 (/IPI)
Q96PM5 (/IPI)
Q96PM5 (/IPI)
Q96PM5 (/IPI)
Q96PM5 (/IPI)
Q96PM5 (/IPI)
(3 more) |
Transcription factor binding GO:0008134
Interacting selectively and non-covalently with a transcription factor, a protein required to initiate or regulate transcription.
|
2 | Q8VZK0 (/IPI) Q8VZK0 (/IPI) |
P53 binding GO:0002039
Interacting selectively and non-covalently with one of the p53 family of proteins.
|
1 | Q9CR50 (/ISO) |
Ubiquitin-protein transferase activity GO:0004842
Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.
|
1 | Q9CR50 (/ISO) |
Ubiquitin-protein transferase activity GO:0004842
Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.
|
1 | Q9CR50 (/ISS) |
Signaling receptor binding GO:0005102
Interacting selectively and non-covalently with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.
|
1 | Q5XIE4 (/IPI) |
Signaling receptor binding GO:0005102
Interacting selectively and non-covalently with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.
|
1 | Q9CR50 (/ISO) |
Iron ion binding GO:0005506
Interacting selectively and non-covalently with iron (Fe) ions.
|
1 | Q8LPQ5 (/IDA) |
Zinc ion binding GO:0008270
Interacting selectively and non-covalently with zinc (Zn) ions.
|
1 | O14099 (/ISM) |
Zinc ion binding GO:0008270
Interacting selectively and non-covalently with zinc (Zn) ions.
|
1 | Q9CR50 (/ISO) |
Protein homodimerization activity GO:0042803
Interacting selectively and non-covalently with an identical protein to form a homodimer.
|
1 | Q9CR50 (/ISO) |
Ubiquitin protein ligase activity GO:0061630
Catalysis of the transfer of ubiquitin to a substrate protein via the reaction X-ubiquitin + S -> X + S-ubiquitin, where X is either an E2 or E3 enzyme, the X-ubiquitin linkage is a thioester bond, and the S-ubiquitin linkage is an amide bond: an isopeptide bond between the C-terminal glycine of ubiquitin and the epsilon-amino group of lysine residues in the substrate or, in the linear extension of ubiquitin chains, a peptide bond the between the C-terminal glycine and N-terminal methionine of ubiquitin residues.
|
1 | Q8LPQ5 (/IDA) |
Ubiquitin protein ligase activity GO:0061630
Catalysis of the transfer of ubiquitin to a substrate protein via the reaction X-ubiquitin + S -> X + S-ubiquitin, where X is either an E2 or E3 enzyme, the X-ubiquitin linkage is a thioester bond, and the S-ubiquitin linkage is an amide bond: an isopeptide bond between the C-terminal glycine of ubiquitin and the epsilon-amino group of lysine residues in the substrate or, in the linear extension of ubiquitin chains, a peptide bond the between the C-terminal glycine and N-terminal methionine of ubiquitin residues.
|
1 | O14099 (/ISM) |
There are 24 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Protein ubiquitination GO:0016567
The process in which one or more ubiquitin groups are added to a protein.
|
16 |
Q8LPQ5 (/IDA)
Q8VZK0 (/IDA)
Q8VZK0 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
(6 more) |
Ubiquitin-dependent protein catabolic process GO:0006511
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
|
13 |
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
(3 more) |
Positive regulation of protein ubiquitination GO:0031398
Any process that activates or increases the frequency, rate or extent of the addition of ubiquitin groups to a protein.
|
13 |
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
(3 more) |
Positive regulation of proteasomal ubiquitin-dependent protein catabolic process GO:0032436
Any process that activates or increases the frequency, rate or extent of the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.
|
13 |
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
(3 more) |
Error-free translesion synthesis GO:0070987
The conversion of DNA-damage induced single-stranded gaps into large molecular weight DNA after replication by using a specialized DNA polymerase or replication complex to insert a defined nucleotide across the lesion. This process does not remove the replication-blocking lesions but does not causes an increase in the endogenous mutation level. For S. cerevisiae, RAD30 encodes DNA polymerase eta, which incorporates two adenines. When incorporated across a thymine-thymine dimer, it does not increase the endogenous mutation level.
|
13 |
Q96PM5 (/TAS)
Q96PM5 (/TAS)
Q96PM5 (/TAS)
Q96PM5 (/TAS)
Q96PM5 (/TAS)
Q96PM5 (/TAS)
Q96PM5 (/TAS)
Q96PM5 (/TAS)
Q96PM5 (/TAS)
Q96PM5 (/TAS)
(3 more) |
Cellular response to iron ion starvation GO:0010106
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of iron ions.
|
2 | F4IDY5 (/IEP) Q8LPQ5 (/IEP) |
Negative regulation of defense response to bacterium GO:1900425
Any process that stops, prevents or reduces the frequency, rate or extent of defense response to bacterium.
|
2 | Q8VZK0 (/IMP) Q8VZK0 (/IMP) |
Positive regulation of transcription factor catabolic process GO:1901485
Any process that activates or increases the frequency, rate or extent of transcription factor catabolic process.
|
2 | Q8VZK0 (/IDA) Q8VZK0 (/IDA) |
Ubiquitin-dependent protein catabolic process GO:0006511
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
|
1 | Q9CR50 (/ISO) |
Ubiquitin-dependent protein catabolic process GO:0006511
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
|
1 | Q9CR50 (/ISS) |
Cellular response to iron ion starvation GO:0010106
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of iron ions.
|
1 | Q8LPQ5 (/IMP) |
Protein ubiquitination GO:0016567
The process in which one or more ubiquitin groups are added to a protein.
|
1 | Q9CR50 (/ISO) |
Protein ubiquitination GO:0016567
The process in which one or more ubiquitin groups are added to a protein.
|
1 | Q9CR50 (/ISS) |
Positive regulation of protein ubiquitination GO:0031398
Any process that activates or increases the frequency, rate or extent of the addition of ubiquitin groups to a protein.
|
1 | Q9CR50 (/ISO) |
Positive regulation of protein ubiquitination GO:0031398
Any process that activates or increases the frequency, rate or extent of the addition of ubiquitin groups to a protein.
|
1 | Q9CR50 (/ISS) |
Positive regulation of proteasomal ubiquitin-dependent protein catabolic process GO:0032436
Any process that activates or increases the frequency, rate or extent of the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.
|
1 | Q9CR50 (/ISO) |
Positive regulation of proteasomal ubiquitin-dependent protein catabolic process GO:0032436
Any process that activates or increases the frequency, rate or extent of the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.
|
1 | Q9CR50 (/ISS) |
Proteasome-mediated ubiquitin-dependent protein catabolic process GO:0043161
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.
|
1 | O14099 (/ISS) |
Protein autoubiquitination GO:0051865
The ubiquitination by a protein of one or more of its own amino acid residues, or residues on an identical protein. Ubiquitination occurs on the lysine residue by formation of an isopeptide crosslink.
|
1 | Q9CR50 (/ISO) |
Protein autoubiquitination GO:0051865
The ubiquitination by a protein of one or more of its own amino acid residues, or residues on an identical protein. Ubiquitination occurs on the lysine residue by formation of an isopeptide crosslink.
|
1 | Q9CR50 (/ISS) |
Multicellular organismal iron ion homeostasis GO:0060586
Any process involved in the maintenance of the distribution of iron stores within tissues and organs of a multicellular organism.
|
1 | Q8LPQ5 (/IMP) |
Protein modification by small protein conjugation or removal GO:0070647
A protein modification process in which one or more groups of a small protein, such as ubiquitin or a ubiquitin-like protein, are covalently attached to or removed from a target protein.
|
1 | O14099 (/IC) |
Regulation of stomatal opening GO:1902456
Any process that modulates the frequency, rate or extent of stomatal opening.
|
1 | Q9FFB6 (/IGI) |
Regulation of stomatal opening GO:1902456
Any process that modulates the frequency, rate or extent of stomatal opening.
|
1 | Q9FFB6 (/IMP) |
There are 13 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
16 |
Q8LPQ5 (/IDA)
Q8VZK0 (/IDA)
Q8VZK0 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
(6 more) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
15 |
Q8VZK0 (/IDA)
Q8VZK0 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
(5 more) |
Ubiquitin ligase complex GO:0000151
A protein complex that includes a ubiquitin-protein ligase and enables ubiquitin protein ligase activity. The complex also contains other proteins that may confer substrate specificity on the complex.
|
13 |
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
(3 more) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
13 |
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
(3 more) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
13 |
Q96PM5 (/TAS)
Q96PM5 (/TAS)
Q96PM5 (/TAS)
Q96PM5 (/TAS)
Q96PM5 (/TAS)
Q96PM5 (/TAS)
Q96PM5 (/TAS)
Q96PM5 (/TAS)
Q96PM5 (/TAS)
Q96PM5 (/TAS)
(3 more) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
13 |
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
Q96PM5 (/IDA)
(3 more) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
2 | O14099 (/ISO) Q9CR50 (/ISO) |
Ubiquitin ligase complex GO:0000151
A protein complex that includes a ubiquitin-protein ligase and enables ubiquitin protein ligase activity. The complex also contains other proteins that may confer substrate specificity on the complex.
|
1 | Q9CR50 (/ISO) |
Ubiquitin ligase complex GO:0000151
A protein complex that includes a ubiquitin-protein ligase and enables ubiquitin protein ligase activity. The complex also contains other proteins that may confer substrate specificity on the complex.
|
1 | Q9CR50 (/ISS) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
1 | Q9CR50 (/ISS) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
1 | Q9CR50 (/ISO) |
Cytoplasm GO:0005737
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
|
1 | Q9CR50 (/ISO) |
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
|
1 | Q9CR50 (/ISO) |