The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was: waiting to be named.

Functional Families

Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
« Back to all FunFams

FunFam 1: Ribosomal protein L37

Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.

There are 11 GO terms relating to "molecular function"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Structural constituent of ribosome GO:0003735
The action of a molecule that contributes to the structural integrity of the ribosome.
55 P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS)
(45 more)
RNA binding GO:0003723
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
52 P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS)
(42 more)
Structural constituent of ribosome GO:0003735
The action of a molecule that contributes to the structural integrity of the ribosome.
52 P61927 (/NAS) P61927 (/NAS) P61927 (/NAS) P61927 (/NAS) P61927 (/NAS) P61927 (/NAS) P61927 (/NAS) P61927 (/NAS) P61927 (/NAS) P61927 (/NAS)
(42 more)
Growth factor binding GO:0019838
Interacting selectively and non-covalently with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate.
52 P61928 (/IPI) P61928 (/IPI) P61928 (/IPI) P61928 (/IPI) P61928 (/IPI) P61928 (/IPI) P61928 (/IPI) P61928 (/IPI) P61928 (/IPI) P61928 (/IPI)
(42 more)
Growth factor binding GO:0019838
Interacting selectively and non-covalently with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate.
52 Q9D823 (/ISO) Q9D823 (/ISO) Q9D823 (/ISO) Q9D823 (/ISO) Q9D823 (/ISO) Q9D823 (/ISO) Q9D823 (/ISO) Q9D823 (/ISO) Q9D823 (/ISO) Q9D823 (/ISO)
(42 more)
Structural constituent of ribosome GO:0003735
The action of a molecule that contributes to the structural integrity of the ribosome.
11 P49166 (/IC) P49166 (/IC) P49166 (/IC) P49166 (/IC) P49166 (/IC) P51402 (/IC) P51402 (/IC) P51402 (/IC) P51402 (/IC) P51402 (/IC)
(1 more)
Structural constituent of ribosome GO:0003735
The action of a molecule that contributes to the structural integrity of the ribosome.
5 Q8LEM8 (/IDA) Q8LEM8 (/IDA) Q8LEM8 (/IDA) Q8LFH7 (/IDA) Q8LFH7 (/IDA)
MRNA binding GO:0003729
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
2 Q8LFH7 (/IDA) Q8LFH7 (/IDA)
Structural constituent of ribosome GO:0003735
The action of a molecule that contributes to the structural integrity of the ribosome.
2 P05733 (/ISO) P59289 (/ISO)
Zinc ion binding GO:0008270
Interacting selectively and non-covalently with zinc (Zn) ions.
2 P05733 (/ISS) P59289 (/ISS)
RRNA binding GO:0019843
Interacting selectively and non-covalently with ribosomal RNA.
2 P05733 (/ISS) P59289 (/ISS)

There are 11 GO terms relating to "biological process"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0000184
The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins.
52 P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS)
(42 more)
Translation GO:0006412
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
52 P61927 (/NAS) P61927 (/NAS) P61927 (/NAS) P61927 (/NAS) P61927 (/NAS) P61927 (/NAS) P61927 (/NAS) P61927 (/NAS) P61927 (/NAS) P61927 (/NAS)
(42 more)
Translation GO:0006412
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
52 P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS)
(42 more)
Translational initiation GO:0006413
The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA or circRNA, and an initiation complex that contains the first aminoacyl-tRNA.
52 P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS)
(42 more)
SRP-dependent cotranslational protein targeting to membrane GO:0006614
The targeting of proteins to a membrane that occurs during translation and is dependent upon two key components, the signal-recognition particle (SRP) and the SRP receptor. SRP is a cytosolic particle that transiently binds to the endoplasmic reticulum (ER) signal sequence in a nascent protein, to the large ribosomal unit, and to the SRP receptor in the ER membrane.
52 P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS)
(42 more)
Viral transcription GO:0019083
The process by which a viral genome, or part of a viral genome, is transcribed within the host cell.
52 P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS)
(42 more)
Cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0000448
Endonucleolytic cleavage within ITS2 between the 5.8S rRNA and the LSU-rRNA of an rRNA molecule originally produced as a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.
11 P49166 (/IGI) P49166 (/IGI) P49166 (/IGI) P49166 (/IGI) P49166 (/IGI) P51402 (/IGI) P51402 (/IGI) P51402 (/IGI) P51402 (/IGI) P51402 (/IGI)
(1 more)
Cytoplasmic translation GO:0002181
The chemical reactions and pathways resulting in the formation of a protein in the cytoplasm. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein.
11 P49166 (/IC) P49166 (/IC) P49166 (/IC) P49166 (/IC) P49166 (/IC) P51402 (/IC) P51402 (/IC) P51402 (/IC) P51402 (/IC) P51402 (/IC)
(1 more)
Cytoplasmic translation GO:0002181
The chemical reactions and pathways resulting in the formation of a protein in the cytoplasm. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein.
3 Q9VXX8 (/TAS) Q9VXX8 (/TAS) Q9W1U6 (/TAS)
Cytoplasmic translation GO:0002181
The chemical reactions and pathways resulting in the formation of a protein in the cytoplasm. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein.
2 P05733 (/ISO) P59289 (/ISO)
Translation GO:0006412
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
1 Q9W1U6 (/ISM)

There are 11 GO terms relating to "cellular component"

The search results have been sorted with the annotations that are found most frequently at the top of the list. The results can be filtered by typing text into the search box at the top of the table.
GO Term Annotations Evidence
Cytosolic large ribosomal subunit GO:0022625
The large subunit of a ribosome located in the cytosol.
85 C0H4L5 (/IDA) C0H4L5 (/IDA) C0H4L5 (/IDA) C0H4L5 (/IDA) C0H4L5 (/IDA) C0H4L5 (/IDA) C0H4L5 (/IDA) C0H4L5 (/IDA) C0H4L5 (/IDA) C0H4L5 (/IDA)
(75 more)
Cytosolic large ribosomal subunit GO:0022625
The large subunit of a ribosome located in the cytosol.
55 P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS)
(45 more)
Cytosolic large ribosomal subunit GO:0022625
The large subunit of a ribosome located in the cytosol.
54 P05733 (/ISO) P59289 (/ISO) Q9D823 (/ISO) Q9D823 (/ISO) Q9D823 (/ISO) Q9D823 (/ISO) Q9D823 (/ISO) Q9D823 (/ISO) Q9D823 (/ISO) Q9D823 (/ISO)
(44 more)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
52 P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS) P61927 (/TAS)
(42 more)
Cytosolic large ribosomal subunit GO:0022625
The large subunit of a ribosome located in the cytosol.
52 P61927 (/HDA) P61927 (/HDA) P61927 (/HDA) P61927 (/HDA) P61927 (/HDA) P61927 (/HDA) P61927 (/HDA) P61927 (/HDA) P61927 (/HDA) P61927 (/HDA)
(42 more)
Synapse GO:0045202
The junction between a nerve fiber of one neuron and another neuron, muscle fiber or glial cell. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane.
52 Q9D823 (/EXP) Q9D823 (/EXP) Q9D823 (/EXP) Q9D823 (/EXP) Q9D823 (/EXP) Q9D823 (/EXP) Q9D823 (/EXP) Q9D823 (/EXP) Q9D823 (/EXP) Q9D823 (/EXP)
(42 more)
Synapse GO:0045202
The junction between a nerve fiber of one neuron and another neuron, muscle fiber or glial cell. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane.
52 Q9D823 (/IDA) Q9D823 (/IDA) Q9D823 (/IDA) Q9D823 (/IDA) Q9D823 (/IDA) Q9D823 (/IDA) Q9D823 (/IDA) Q9D823 (/IDA) Q9D823 (/IDA) Q9D823 (/IDA)
(42 more)
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
32 B5FY56 (/IDA) B5G0E5 (/IDA) H0YVE2 (/IDA) H0YVE2 (/IDA) H0YVE2 (/IDA) H0YVE2 (/IDA) H0YVE2 (/IDA) H0YVE2 (/IDA) H0YVE2 (/IDA) H0YVE2 (/IDA)
(22 more)
Preribosome, large subunit precursor GO:0030687
A preribosomal complex consisting of 27SA, 27SB, and/or 7S pre-rRNA, 5S rRNA, ribosomal proteins including late-associating large subunit proteins, and associated proteins; a precursor of the eukaryotic cytoplasmic large ribosomal subunit.
11 P49166 (/IDA) P49166 (/IDA) P49166 (/IDA) P49166 (/IDA) P49166 (/IDA) P51402 (/IDA) P51402 (/IDA) P51402 (/IDA) P51402 (/IDA) P51402 (/IDA)
(1 more)
Cytosolic ribosome GO:0022626
A ribosome located in the cytosol.
3 Q43292 (/IDA) Q43292 (/IDA) Q43292 (/IDA)
Cytosol GO:0005829
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
2 P05733 (/HDA) P59289 (/HDA)