The name of this superfamily has been modified since the most recent official CATH+ release (v4_3_0). At the point of the last release, this superfamily was named:
"WGR domain
".
FunFam 1: Poly [ADP-ribose] polymerase
Please note: GO annotations are assigned to the full protein sequence rather than individual protein domains. Since a given protein can contain multiple domains, it is possible that some of the annotations below come from additional domains that occur in the same protein, but have been classified elsewhere in CATH.
There are 10 GO terms relating to "molecular function"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
NAD+ ADP-ribosyltransferase activity GO:0003950
Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor.
|
4 | O88554 (/IDA) Q09525 (/IDA) Q9Y6F1 (/IDA) Q9Y6F1 (/IDA) |
Protein binding GO:0005515
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
|
3 | O88554 (/IPI) Q9Y6F1 (/IPI) Q9Y6F1 (/IPI) |
Catalytic activity GO:0003824
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
|
2 | Q9Y6F1 (/TAS) Q9Y6F1 (/TAS) |
NAD DNA ADP-ribosyltransferase activity GO:0140294
Catalysis of the transfer of the ADP-ribose group of NAD+ to a residue in double-stranded DNA.
|
2 | Q9Y6F1 (/IDA) Q9Y6F1 (/IDA) |
NAD DNA ADP-ribosyltransferase activity GO:0140294
Catalysis of the transfer of the ADP-ribose group of NAD+ to a residue in double-stranded DNA.
|
2 | O88554 (/ISO) Q3ULW8 (/ISO) |
NAD DNA ADP-ribosyltransferase activity GO:0140294
Catalysis of the transfer of the ADP-ribose group of NAD+ to a residue in double-stranded DNA.
|
2 | O88554 (/ISS) Q3ULW8 (/ISS) |
Protein ADP-ribosylase activity GO:1990404
The transfer, from NAD, of ADP-ribose to a protein amino acid residue.
|
2 | Q9Y6F1 (/IDA) Q9Y6F1 (/IDA) |
Protein ADP-ribosylase activity GO:1990404
The transfer, from NAD, of ADP-ribose to a protein amino acid residue.
|
2 | O88554 (/ISO) Q3ULW8 (/ISO) |
NAD+ ADP-ribosyltransferase activity GO:0003950
Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor.
|
1 | Q3ULW8 (/ISO) |
Protein ADP-ribosylase activity GO:1990404
The transfer, from NAD, of ADP-ribose to a protein amino acid residue.
|
1 | O88554 (/ISS) |
There are 44 GO terms relating to "biological process"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
DNA repair GO:0006281
The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway.
|
3 | O88554 (/TAS) Q9Y6F1 (/TAS) Q9Y6F1 (/TAS) |
Telomere maintenance GO:0000723
Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins, the length of telomeric DNA and the replication and repair of the DNA. These processes includes those that shorten, lengthen, replicate and repair the telomeric DNA sequences.
|
2 | Q9Y6F1 (/IMP) Q9Y6F1 (/IMP) |
Double-strand break repair GO:0006302
The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix.
|
2 | Q9Y6F1 (/IDA) Q9Y6F1 (/IDA) |
Double-strand break repair GO:0006302
The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix.
|
2 | Q9Y6F1 (/IMP) Q9Y6F1 (/IMP) |
Protein ADP-ribosylation GO:0006471
The transfer, from NAD, of ADP-ribose to protein amino acids.
|
2 | Q9Y6F1 (/IDA) Q9Y6F1 (/IDA) |
Protein ADP-ribosylation GO:0006471
The transfer, from NAD, of ADP-ribose to protein amino acids.
|
2 | Q9Y6F1 (/TAS) Q9Y6F1 (/TAS) |
DNA ADP-ribosylation GO:0030592
The covalent attachment of an ADP-ribosyl group to a residue in double-stranded DNA.
|
2 | Q9Y6F1 (/IDA) Q9Y6F1 (/IDA) |
DNA ADP-ribosylation GO:0030592
The covalent attachment of an ADP-ribosyl group to a residue in double-stranded DNA.
|
2 | O88554 (/ISO) Q3ULW8 (/ISO) |
DNA ADP-ribosylation GO:0030592
The covalent attachment of an ADP-ribosyl group to a residue in double-stranded DNA.
|
2 | O88554 (/ISS) Q3ULW8 (/ISS) |
Negative regulation of isotype switching GO:0045829
Any process that stops, prevents, or reduces the frequency, rate or extent of isotype switching.
|
2 | Q9Y6F1 (/ISS) Q9Y6F1 (/ISS) |
Positive regulation of DNA ligation GO:0051106
Any process that activates or increases the frequency, rate or extent of DNA ligation, the re-formation of a broken phosphodiester bond in the DNA backbone, carried out by DNA ligase.
|
2 | Q9Y6F1 (/IGI) Q9Y6F1 (/IGI) |
Regulation of mitotic spindle organization GO:0060236
Any process that modulates the rate, frequency or extent of the assembly, arrangement of constituent parts, or disassembly of the microtubule spindle during a mitotic cell cycle.
|
2 | Q9Y6F1 (/IMP) Q9Y6F1 (/IMP) |
Protein auto-ADP-ribosylation GO:0070213
The ADP-ribosylation by a protein of one or more of its own amino acid residues, or residues on an identical protein.
|
2 | Q9Y6F1 (/IDA) Q9Y6F1 (/IDA) |
Ectodermal placode development GO:0071696
The progression of an ectodermal placode over time from its initial formation until its mature state. An ectodermal placode is a thickening of the ectoderm that is the primordium of many structures derived from the ectoderm.
|
2 | F1QSK1 (/IMP) Q7ZVB0 (/IMP) |
Regulation of neural crest formation GO:0090299
Any process that modulates the rate, frequency, or extent of neural crest formation. Neural crest formation is the formation of the specialized region of ectoderm between the neural ectoderm (neural plate) and non-neural ectoderm. The neural crest gives rise to the neural crest cells that migrate away from this region as neural tube formation proceeds.
|
2 | F1QSK1 (/IMP) Q7ZVB0 (/IMP) |
Protein mono-ADP-ribosylation GO:0140289
The transfer, from NAD, of a single (mono) ADP-ribose molecule to protein amino acids.
|
2 | Q9Y6F1 (/IDA) Q9Y6F1 (/IDA) |
Negative regulation of telomerase RNA reverse transcriptase activity GO:1905662
Any process that stops, prevents or reduces the frequency, rate or extent of telomerase RNA reverse transcriptase activity.
|
2 | Q9Y6F1 (/IMP) Q9Y6F1 (/IMP) |
Protein localization to site of double-strand break GO:1990166
Any process in which a protein is transported to, or maintained at, a region of a chromosome at which a DNA double-strand break has occurred.
|
2 | Q9Y6F1 (/IMP) Q9Y6F1 (/IMP) |
Positive regulation of double-strand break repair via nonhomologous end joining GO:2001034
Any process that activates or increases the frequency, rate or extent of double-strand break repair via nonhomologous end joining.
|
2 | Q9Y6F1 (/IDA) Q9Y6F1 (/IDA) |
Telomere maintenance GO:0000723
Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins, the length of telomeric DNA and the replication and repair of the DNA. These processes includes those that shorten, lengthen, replicate and repair the telomeric DNA sequences.
|
1 | Q3ULW8 (/ISO) |
Base-excision repair GO:0006284
In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase.
|
1 | O88554 (/IMP) |
Double-strand break repair GO:0006302
The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix.
|
1 | Q3ULW8 (/IGI) |
Double-strand break repair GO:0006302
The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix.
|
1 | Q3ULW8 (/ISO) |
Protein ADP-ribosylation GO:0006471
The transfer, from NAD, of ADP-ribose to protein amino acids.
|
1 | Q3ULW8 (/ISO) |
Peptidyl-serine ADP-ribosylation GO:0018312
The transfer, from NAD, of ADP-ribose to peptidyl-serine to form peptidyl-O-(ADP-ribosyl)-L-serine.
|
1 | O88554 (/ISO) |
Peptidyl-serine ADP-ribosylation GO:0018312
The transfer, from NAD, of ADP-ribose to peptidyl-serine to form peptidyl-O-(ADP-ribosyl)-L-serine.
|
1 | O88554 (/ISS) |
Negative regulation of isotype switching GO:0045829
Any process that stops, prevents, or reduces the frequency, rate or extent of isotype switching.
|
1 | Q3ULW8 (/IMP) |
Positive regulation of DNA ligation GO:0051106
Any process that activates or increases the frequency, rate or extent of DNA ligation, the re-formation of a broken phosphodiester bond in the DNA backbone, carried out by DNA ligase.
|
1 | Q3ULW8 (/ISO) |
Regulation of mitotic spindle organization GO:0060236
Any process that modulates the rate, frequency or extent of the assembly, arrangement of constituent parts, or disassembly of the microtubule spindle during a mitotic cell cycle.
|
1 | Q3ULW8 (/ISO) |
Positive regulation of cell growth involved in cardiac muscle cell development GO:0061051
Any process that increases the rate, frequency, or extent of the growth of a cardiac muscle cell, where growth contributes to the progression of the cell over time from its initial formation to its mature state.
|
1 | G3V749 (/IMP) |
Positive regulation of cell growth involved in cardiac muscle cell development GO:0061051
Any process that increases the rate, frequency, or extent of the growth of a cardiac muscle cell, where growth contributes to the progression of the cell over time from its initial formation to its mature state.
|
1 | O88554 (/ISO) |
Protein poly-ADP-ribosylation GO:0070212
The transfer of multiple ADP-ribose residues from NAD to a protein amino acid, forming a poly(ADP-ribose) chain.
|
1 | Q09525 (/IDA) |
Protein poly-ADP-ribosylation GO:0070212
The transfer of multiple ADP-ribose residues from NAD to a protein amino acid, forming a poly(ADP-ribose) chain.
|
1 | O88554 (/ISO) |
Protein poly-ADP-ribosylation GO:0070212
The transfer of multiple ADP-ribose residues from NAD to a protein amino acid, forming a poly(ADP-ribose) chain.
|
1 | O88554 (/ISS) |
Protein auto-ADP-ribosylation GO:0070213
The ADP-ribosylation by a protein of one or more of its own amino acid residues, or residues on an identical protein.
|
1 | Q3ULW8 (/ISO) |
Extrinsic apoptotic signaling pathway GO:0097191
A series of molecular signals in which a signal is conveyed from the cell surface to trigger the apoptotic death of a cell. The pathway starts with either a ligand binding to a cell surface receptor, or a ligand being withdrawn from a cell surface receptor (e.g. in the case of signaling by dependence receptors), and ends when the execution phase of apoptosis is triggered.
|
1 | O88554 (/IDA) |
Protein mono-ADP-ribosylation GO:0140289
The transfer, from NAD, of a single (mono) ADP-ribose molecule to protein amino acids.
|
1 | Q3ULW8 (/ISO) |
Protein mono-ADP-ribosylation GO:0140289
The transfer, from NAD, of a single (mono) ADP-ribose molecule to protein amino acids.
|
1 | Q3ULW8 (/ISS) |
Negative regulation of neuron death GO:1901215
Any process that stops, prevents or reduces the frequency, rate or extent of neuron death.
|
1 | G3V749 (/IMP) |
Negative regulation of neuron death GO:1901215
Any process that stops, prevents or reduces the frequency, rate or extent of neuron death.
|
1 | O88554 (/ISO) |
Negative regulation of telomerase RNA reverse transcriptase activity GO:1905662
Any process that stops, prevents or reduces the frequency, rate or extent of telomerase RNA reverse transcriptase activity.
|
1 | Q3ULW8 (/ISO) |
Protein localization to site of double-strand break GO:1990166
Any process in which a protein is transported to, or maintained at, a region of a chromosome at which a DNA double-strand break has occurred.
|
1 | Q3ULW8 (/ISO) |
Positive regulation of double-strand break repair via nonhomologous end joining GO:2001034
Any process that activates or increases the frequency, rate or extent of double-strand break repair via nonhomologous end joining.
|
1 | Q3ULW8 (/ISO) |
Positive regulation of double-strand break repair via nonhomologous end joining GO:2001034
Any process that activates or increases the frequency, rate or extent of double-strand break repair via nonhomologous end joining.
|
1 | Q3ULW8 (/ISS) |
There are 8 GO terms relating to "cellular component"
The search results have been sorted with the annotations that are found most frequently at the top of the
list. The results can be filtered by typing text into the search box at the top of the table.
GO Term | Annotations | Evidence |
---|---|---|
Site of double-strand break GO:0035861
A region of a chromosome at which a DNA double-strand break has occurred. DNA damage signaling and repair proteins accumulate at the lesion to respond to the damage and repair the DNA to form a continuous DNA helix.
|
3 | Q3ULW8 (/IDA) Q9Y6F1 (/IDA) Q9Y6F1 (/IDA) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
2 | G3V167 (/IDA) O88554 (/IDA) |
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
|
2 | G3V167 (/IDA) O88554 (/IDA) |
Nucleus GO:0005634
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
|
1 | O88554 (/ISO) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
1 | O88554 (/IDA) |
Nucleoplasm GO:0005654
That part of the nuclear content other than the chromosomes or the nucleolus.
|
1 | O88554 (/ISO) |
Nucleolus GO:0005730
A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
|
1 | O88554 (/ISO) |
Site of double-strand break GO:0035861
A region of a chromosome at which a DNA double-strand break has occurred. DNA damage signaling and repair proteins accumulate at the lesion to respond to the damage and repair the DNA to form a continuous DNA helix.
|
1 | Q3ULW8 (/ISO) |